RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 SALL3Q9BXA9 1300 aa11.3□□□□□ -0.6
TM4SF1-203ENST00000493298 SASH1O94885 1247 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 EGFRP00533 1210 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 ATG9AQ7Z3C6 839 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 TXNRD3Q86VQ6 643 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 SUPT20HQ8NEM7 779 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 MINPP1Q9UNW1 487 aa11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 NSFL1CQ9UNZ2 370 aaKnown RBP11.29□□□□□ -0.6
TM4SF1-203ENST00000493298 SRGAP3O43295 1099 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 SMARCA5O60264 1052 aaPredicted RBP11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 RAD17O75943 681 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 EIF6P56537 245 aaKnown RBP11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 NUCB1Q02818 461 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 FMR1Q06787 632 aaKnown RBP eCLIP11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 KLRG1Q96E93 195 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 ZNF594Q96JF6 807 aaPredicted RBP11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 GMLQ99445 158 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 PUS3Q9BZE2 481 aaKnown RBP11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 RWDD1Q9H446 243 aaPredicted RBP11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 DBNDD1Q9H9R9 158 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 EXOC6BQ9Y2D4 811 aa11.28□□□□□ -0.6
TM4SF1-203ENST00000493298 PSMD14O00487 310 aa11.27□□□□□ -0.61
TM4SF1-203ENST00000493298 KLRK1P26718 216 aa11.27□□□□□ -0.61
TM4SF1-203ENST00000493298 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
TM4SF1-203ENST00000493298 TRPM4Q8TD43 1214 aa11.27□□□□□ -0.61
TM4SF1-203ENST00000493298 GJA3Q9Y6H8 435 aa11.27□□□□□ -0.61
TM4SF1-203ENST00000493298 XDHP47989 1333 aa11.27□□□□□ -0.61
TM4SF1-203ENST00000493298 MED23Q9ULK4 1368 aa11.27□□□□□ -0.61
TM4SF1-203ENST00000493298 SNAP23O00161 211 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 ECE2O60344 883 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 VIL1P09327 827 aaKnown RBP11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 ITGA6P23229 1130 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 LRRC24Q50LG9 513 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 MAP1SQ66K74 1059 aaPredicted RBP11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 CIAPIN1Q6FI81 312 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 ANKRD18AQ8IVF6 992 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 MYH13Q9UKX3 1938 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 LAMB1P07942 1786 aa11.26□□□□□ -0.61
TM4SF1-203ENST00000493298 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 UFL1O94874 794 aa11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 HSP90B1P14625 803 aaKnown RBP11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 CST9Q5W186 159 aa11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 DPF2Q92785 391 aa11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
TM4SF1-203ENST00000493298 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 EAPPQ56P03 285 aaPredicted RBP11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 CHD1LQ86WJ1 897 aa11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 GCC1Q96CN9 775 aa11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 ADARB2Q9NS39 739 aaKnown RBP11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 GGA1Q9UJY5 639 aa11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 RIPOR2Q9Y4F9 1068 aa11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 CNTNAP1P78357 1384 aa11.24□□□□□ -0.61
TM4SF1-203ENST00000493298 TRAF5O00463 557 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 ANKRD45Q5TZF3 282 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 DLK2Q6UY11 383 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 C15orf52Q6ZUT6 534 aaKnown RBP11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 VGLL2Q8N8G2 317 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 RHPN1Q8TCX5 695 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 LNPKQ9C0E8 428 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 CNOT7Q9UIV1 285 aaKnown RBP11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
TM4SF1-203ENST00000493298 ASTN2O75129 1339 aaPredicted RBP11.22□□□□□ -0.61
TM4SF1-203ENST00000493298 ATP2B4P23634 1241 aa11.22□□□□□ -0.61
TM4SF1-203ENST00000493298 CHRNDQ07001 517 aa11.22□□□□□ -0.61
TM4SF1-203ENST00000493298 TNIP1Q15025 636 aa11.22□□□□□ -0.61
TM4SF1-203ENST00000493298 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
TM4SF1-203ENST00000493298 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
TM4SF1-203ENST00000493298 EAF2Q96CJ1 260 aaPredicted RBP11.22□□□□□ -0.61
TM4SF1-203ENST00000493298 RASSF10A6NK89 507 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 EYA2O00167 538 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 APBB1O00213 710 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 RPS12P25398 132 aaKnown RBP11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 DACT2Q5SW24 774 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 ZC3H15Q8WU90 426 aaKnown RBP11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 EYA3Q99504 573 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 MXD3Q9BW11 206 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 SIL1Q9H173 461 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 IL1RAPL2Q9NP60 686 aa11.21□□□□□ -0.61
TM4SF1-203ENST00000493298 TLR7Q9NYK1 1049 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms