RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 USP17L1Q7RTZ2 530 aa28.22■■■□□ 2.11
LYSMD4-208ENST00000493256 GGA3Q9NZ52 723 aa28.22■■■□□ 2.11
LYSMD4-208ENST00000493256 ASTN2O75129 1339 aaPredicted RBP28.21■■■□□ 2.11
LYSMD4-208ENST00000493256 MAP2K2P36507 400 aa28.2■■■□□ 2.1
LYSMD4-208ENST00000493256 MPHOSPH8Q99549 860 aa28.2■■■□□ 2.1
LYSMD4-208ENST00000493256 LEMD3Q9Y2U8 911 aa28.2■■■□□ 2.1
LYSMD4-208ENST00000493256 TXNRD3Q86VQ6 643 aa28.19■■■□□ 2.1
LYSMD4-208ENST00000493256 ZNF646O15015 1829 aaPredicted RBP28.19■■■□□ 2.1
LYSMD4-208ENST00000493256 ZNF521Q96K83 1311 aa28.18■■■□□ 2.1
LYSMD4-208ENST00000493256 USP17L8P0C7I0 530 aa28.18■■■□□ 2.1
LYSMD4-208ENST00000493256 ANKRD2Q9GZV1 360 aa28.18■■■□□ 2.1
LYSMD4-208ENST00000493256 ZNF804BA4D1E1 1349 aa28.18■■■□□ 2.1
LYSMD4-208ENST00000493256 KLRK1P26718 216 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 HUNKP57058 714 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 FOXO4P98177 505 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 SCARF1Q14162 830 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 SULF1Q8IWU6 871 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 BEGAINQ9BUH8 593 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 COA1Q9GZY4 146 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 MYOZ2Q9NPC6 264 aa28.17■■■□□ 2.1
LYSMD4-208ENST00000493256 ANKRD18BA2A2Z9 1011 aa28.16■■■□□ 2.1
LYSMD4-208ENST00000493256 DACT2Q5SW24 774 aa28.16■■■□□ 2.1
LYSMD4-208ENST00000493256 MXD3Q9BW11 206 aa28.16■■■□□ 2.1
LYSMD4-208ENST00000493256 GBA2Q9HCG7 927 aaPredicted RBP28.16■■■□□ 2.1
LYSMD4-208ENST00000493256 CHRNDQ07001 517 aa28.15■■■□□ 2.1
LYSMD4-208ENST00000493256 ANGEL2Q5VTE6 544 aaKnown RBP28.15■■■□□ 2.1
LYSMD4-208ENST00000493256 FBXW7Q969H0 707 aa28.14■■■□□ 2.1
LYSMD4-208ENST00000493256 GRM8O00222 908 aa28.13■■■□□ 2.09
LYSMD4-208ENST00000493256 IFIT5Q13325 482 aaKnown RBP28.13■■■□□ 2.09
LYSMD4-208ENST00000493256 EPHA10Q5JZY3 1008 aa28.13■■■□□ 2.09
LYSMD4-208ENST00000493256 STRIP1Q5VSL9 837 aa28.13■■■□□ 2.09
LYSMD4-208ENST00000493256 C2orf69Q8N8R5 385 aa28.13■■■□□ 2.09
LYSMD4-208ENST00000493256 CDCA5Q96FF9 252 aa28.13■■■□□ 2.09
LYSMD4-208ENST00000493256 CHMP3Q9Y3E7 222 aa28.13■■■□□ 2.09
LYSMD4-208ENST00000493256 A0A1B0GUL6 1792 aa28.11■■■□□ 2.09
LYSMD4-208ENST00000493256 KCNJ4P48050 445 aa28.11■■■□□ 2.09
LYSMD4-208ENST00000493256 BRPF1P55201 1214 aaPredicted RBP28.11■■■□□ 2.09
LYSMD4-208ENST00000493256 SLC4A10Q6U841 1118 aa28.11■■■□□ 2.09
LYSMD4-208ENST00000493256 LMBR1LQ6UX01 489 aa28.11■■■□□ 2.09
LYSMD4-208ENST00000493256 SNAP23O00161 211 aa28.1■■■□□ 2.09
LYSMD4-208ENST00000493256 NOGQ13253 232 aa28.1■■■□□ 2.09
LYSMD4-208ENST00000493256 RGMBQ6NW40 437 aa28.1■■■□□ 2.09
LYSMD4-208ENST00000493256 ZIC5Q96T25 663 aa28.1■■■□□ 2.09
LYSMD4-208ENST00000493256 TSKSQ9UJT2 592 aa28.1■■■□□ 2.09
LYSMD4-208ENST00000493256 MYO3BQ8WXR4 1341 aa28.1■■■□□ 2.09
LYSMD4-208ENST00000493256 PITPNM2Q9BZ72 1349 aa28.1■■■□□ 2.09
LYSMD4-208ENST00000493256 TAF5LO75529 589 aa28.09■■■□□ 2.09
LYSMD4-208ENST00000493256 ALDH1L1O75891 902 aa28.09■■■□□ 2.09
LYSMD4-208ENST00000493256 HELBQ8NG08 1087 aaPredicted RBP28.09■■■□□ 2.09
LYSMD4-208ENST00000493256 C9orf78Q9NZ63 289 aaPredicted RBP28.09■■■□□ 2.09
LYSMD4-208ENST00000493256 IRS2Q9Y4H2 1338 aa28.09■■■□□ 2.09
LYSMD4-208ENST00000493256 FAM155AB1AL88 458 aaPredicted RBP28.08■■■□□ 2.09
LYSMD4-208ENST00000493256 NBPF9Q3BBW0 867 aa28.08■■■□□ 2.09
LYSMD4-208ENST00000493256 TTLL5Q6EMB2 1281 aa28.08■■■□□ 2.09
LYSMD4-208ENST00000493256 OGFOD1Q8N543 542 aa28.08■■■□□ 2.09
LYSMD4-208ENST00000493256 SRCIN1Q9C0H9 1055 aa28.08■■■□□ 2.09
LYSMD4-208ENST00000493256 SCAF8Q9UPN6 1271 aaKnown RBP28.07■■■□□ 2.08
LYSMD4-208ENST00000493256 CA12O43570 354 aa28.06■■■□□ 2.08
LYSMD4-208ENST00000493256 GTF2IP78347 998 aa28.06■■■□□ 2.08
LYSMD4-208ENST00000493256 CCDC57Q2TAC2 916 aa28.06■■■□□ 2.08
LYSMD4-208ENST00000493256 C15orf52Q6ZUT6 534 aaKnown RBP28.06■■■□□ 2.08
LYSMD4-208ENST00000493256 ZNF594Q96JF6 807 aaPredicted RBP28.06■■■□□ 2.08
LYSMD4-208ENST00000493256 CD209Q9NNX6 404 aa28.06■■■□□ 2.08
LYSMD4-208ENST00000493256 ZNF157P51786 506 aaPredicted RBP28.05■■■□□ 2.08
LYSMD4-208ENST00000493256 WNT10BO00744 389 aa28.04■■■□□ 2.08
LYSMD4-208ENST00000493256 TAF7LQ5H9L4 462 aa28.04■■■□□ 2.08
LYSMD4-208ENST00000493256 MRPL50Q8N5N7 158 aaKnown RBP28.04■■■□□ 2.08
LYSMD4-208ENST00000493256 CCDC102AQ96A19 550 aa28.04■■■□□ 2.08
LYSMD4-208ENST00000493256 E9PSI1 815 aa28.03■■■□□ 2.08
LYSMD4-208ENST00000493256 LDHAL6AQ6ZMR3 332 aa28.03■■■□□ 2.08
LYSMD4-208ENST00000493256 KIAA0825Q8IV33 1275 aa28.03■■■□□ 2.08
LYSMD4-208ENST00000493256 SUCLG2Q96I99 432 aa28.03■■■□□ 2.08
LYSMD4-208ENST00000493256 PAPPA2Q9BXP8 1791 aa28.03■■■□□ 2.08
LYSMD4-208ENST00000493256 SASH1O94885 1247 aa28.02■■■□□ 2.08
LYSMD4-208ENST00000493256 MMP14P50281 582 aa28.02■■■□□ 2.08
LYSMD4-208ENST00000493256 KAZALD1Q96I82 304 aa28.02■■■□□ 2.08
LYSMD4-208ENST00000493256 SLC10A3P09131 477 aa28.01■■■□□ 2.07
LYSMD4-208ENST00000493256 PRAMEF18Q5VWM3 479 aa28.01■■■□□ 2.07
LYSMD4-208ENST00000493256 CNNM1Q9NRU3 951 aa28.01■■■□□ 2.07
LYSMD4-208ENST00000493256 UTYO14607 1347 aa28■■■□□ 2.07
LYSMD4-208ENST00000493256 PLIN1O60240 522 aa28■■■□□ 2.07
LYSMD4-208ENST00000493256 NBPF7P0C2Y1 421 aaPredicted RBP28■■■□□ 2.07
LYSMD4-208ENST00000493256 FKBP1BP68106 108 aa28■■■□□ 2.07
LYSMD4-208ENST00000493256 HDAC9Q9UKV0 1011 aa28■■■□□ 2.07
LYSMD4-208ENST00000493256 KIF23Q02241 960 aaPredicted RBP27.99■■■□□ 2.07
LYSMD4-208ENST00000493256 SLFN5Q08AF3 891 aa27.99■■■□□ 2.07
LYSMD4-208ENST00000493256 ZNF804AQ7Z570 1209 aa27.99■■■□□ 2.07
LYSMD4-208ENST00000493256 CERS5Q8N5B7 392 aa27.99■■■□□ 2.07
LYSMD4-208ENST00000493256 IL1R1P14778 569 aa27.98■■■□□ 2.07
LYSMD4-208ENST00000493256 MOB2Q70IA6 237 aa27.98■■■□□ 2.07
LYSMD4-208ENST00000493256 SSH1Q8WYL5 1049 aa27.98■■■□□ 2.07
LYSMD4-208ENST00000493256 ABHD8Q96I13 439 aa27.98■■■□□ 2.07
LYSMD4-208ENST00000493256 ZBED3Q96IU2 234 aaPredicted RBP27.98■■■□□ 2.07
LYSMD4-208ENST00000493256 CASP8AP2Q9UKL3 1982 aa27.98■■■□□ 2.07
LYSMD4-208ENST00000493256 PTPRCP08575 1304 aa27.97■■■□□ 2.07
LYSMD4-208ENST00000493256 RASAL3Q86YV0 1011 aa27.97■■■□□ 2.07
LYSMD4-208ENST00000493256 PUS3Q9BZE2 481 aaKnown RBP27.96■■■□□ 2.07
LYSMD4-208ENST00000493256 BICC1Q9H694 974 aaKnown RBP27.96■■■□□ 2.07
LYSMD4-208ENST00000493256 UBE2Q2LH0YL09 131 aa27.94■■■□□ 2.06
LYSMD4-208ENST00000493256 RABL6Q3YEC7 729 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms