RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 DPF2Q92785 391 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 GMLQ99445 158 aa9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.97
PDLIM1-204ENST00000492511 EGFRP00533 1210 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 HTRA3P83110 453 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 RSBN1LQ6PCB5 846 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 USP50Q70EL3 339 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 ATG9AQ7Z3C6 839 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 PNMA8AQ86V59 439 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 TRPM4Q8TD43 1214 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 MXD3Q9BW11 206 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 COA1Q9GZY4 146 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 CD209Q9NNX6 404 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 ADARB2Q9NS39 739 aaKnown RBP9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 PGAP2Q9UHJ9 254 aa9.01□□□□□ -0.97
PDLIM1-204ENST00000492511 ADAMTSL1Q8N6G6 1762 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 USP17L3A6NCW0 530 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 USP17L4A6NCW7 530 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 G3V3G9 751 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 ZBTB7BO15156 539 aaPredicted RBP9□□□□□ -0.97
PDLIM1-204ENST00000492511 GNAI3P08754 354 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 RPS12P25398 132 aaKnown RBP9□□□□□ -0.97
PDLIM1-204ENST00000492511 KCNJ4P48050 445 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 MTX1Q13505 466 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 UBE4AQ14139 1066 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 DACT2Q5SW24 774 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 DCAF8Q5TAQ9 597 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 MAP1SQ66K74 1059 aaPredicted RBP9□□□□□ -0.97
PDLIM1-204ENST00000492511 USP17L1Q7RTZ2 530 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 SAMD7Q7Z3H4 446 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 MICALL2Q8IY33 904 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
PDLIM1-204ENST00000492511 CNTROBQ8N137 903 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 FAM84BQ96KN1 310 aaPredicted RBP9□□□□□ -0.97
PDLIM1-204ENST00000492511 PA2G4Q9UQ80 394 aaKnown RBP9□□□□□ -0.97
PDLIM1-204ENST00000492511 CLEC11AQ9Y240 323 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 SCN4AP35499 1836 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 MROH5Q6ZUA9 1318 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 PASKQ96RG2 1323 aa9□□□□□ -0.97
PDLIM1-204ENST00000492511 SPEF2Q9C093 1822 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 H7C1D1 291 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 EYA2O00167 538 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 PDE8BO95263 885 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 HSPA1AP0DMV8 641 aaKnown RBP8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 HSPA1BP0DMV9 641 aaKnown RBP8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 IL1R1P14778 569 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 FGFR2P21802 821 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 ZNF280AP59817 542 aaPredicted RBP8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 FMR1Q06787 632 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 METTL24Q5JXM2 366 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 STRIP1Q5VSL9 837 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 FBXO33Q7Z6M2 555 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 AGBL3Q8NEM8 1001 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 PANK1Q8TE04 598 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 COPRSQ9NQ92 184 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 RCAN3Q9UKA8 241 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 SCN9AQ15858 1988 aa8.99□□□□□ -0.97
PDLIM1-204ENST00000492511 ZNF609O15014 1411 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 PCNTO95613 3336 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 PNMA6EA0A0J9YXQ4 647 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 GNAI2P04899 355 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 GYG1P46976 350 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 GTF2IP78347 998 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 TBC1D10BQ4KMP7 808 aaPredicted RBP8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 TTLL5Q6EMB2 1281 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 CERS5Q8N5B7 392 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 TDRD7Q8NHU6 1098 aaKnown RBP8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 SIL1Q9H173 461 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 HDAC5Q9UQL6 1122 aa8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.98□□□□□ -0.97
PDLIM1-204ENST00000492511 SRGAP3O43295 1099 aa8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 CIAO1O76071 339 aa8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 HIBADHP31937 336 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 DLK2Q6UY11 383 aa8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 ZNF804AQ7Z570 1209 aa8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 ITPRIPQ8IWB1 547 aa8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 FTSJ3Q8IY81 847 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 ZC3H15Q8WU90 426 aaKnown RBP8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 C1orf115Q9H7X2 142 aa8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 FBXO3Q9UK99 471 aa8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 ASTN2O75129 1339 aaPredicted RBP8.97□□□□□ -0.97
PDLIM1-204ENST00000492511 TRAF5O00463 557 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 SASH1O94885 1247 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 USP17L8P0C7I0 530 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 IL15P40933 162 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 BCAMP50895 628 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 ATP8B2P98198 1209 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 POLA2Q14181 598 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 C20orf194Q5TEA3 1177 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 CST9Q5W186 159 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 FBXW7Q969H0 707 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 GLIS2Q9BZE0 524 aaPredicted RBP8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 MYOZ2Q9NPC6 264 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 JAG2Q9Y219 1238 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 A0A1B0GUL6 1792 aa8.96□□□□□ -0.98
PDLIM1-204ENST00000492511 FKBP1AP62942 108 aaKnown RBP8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 SCARF1Q14162 830 aa8.95□□□□□ -0.98
PDLIM1-204ENST00000492511 PUM3Q15397 648 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms