RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 BBOX1O75936 387 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 BAG3O95817 575 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 SLC3A2P08195 630 aaKnown RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 ZAP70P43403 619 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 PHKA1P46020 1223 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 STK3Q13188 491 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 SPTY2D1Q68D10 685 aaPredicted RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 PI16Q6UXB8 463 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 LARP6Q9BRS8 491 aaKnown RBP5.34□□□□□ -1.55
TRA2B-215ENST00000492417 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 PAG1Q9NWQ8 432 aa5.34□□□□□ -1.55
TRA2B-215ENST00000492417 PPFIA3O75145 1194 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 GRAPQ13588 217 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 CCDC93Q567U6 631 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 PRPF40BQ6NWY9 871 aaKnown RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 GRAPLQ8TC17 118 aaPredicted RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 BRIP1Q9BX63 1249 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 C22orf23Q9BZE7 217 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 RNF181Q9P0P0 153 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 TTF2Q9UNY4 1162 aaKnown RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 ADCY9O60503 1353 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 ST18O60284 1047 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 PDE8BO95263 885 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 NEK4P51957 841 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 HDAC1Q13547 482 aaPredicted RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 AOC3Q16853 763 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SLF2Q8IX21 1173 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 CCDC82Q8N4S0 544 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 TAOK3Q9H2K8 898 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SAP30BPQ9UHR5 308 aaKnown RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SLIT2O94813 1529 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 STRCP1A6NGW2 1772 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 UBN2Q6ZU65 1347 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 MYOM1P52179 1685 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SDSP20132 328 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 NUCB1Q02818 461 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 PTPN12Q05209 780 aaKnown RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 TTF1Q15361 905 aaPredicted RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 ZRSR1Q15695 479 aaKnown RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 WDR78Q5VTH9 848 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 MCTP1Q6DN14 999 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 RAB11FIP4Q86YS3 637 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 ZNF34Q8IZ26 560 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SUPT20HQ8NEM7 779 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SLC16A10Q8TF71 515 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 EVI5LQ96CN4 794 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 UPF3BQ9BZI7 483 aaKnown RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 AATFQ9NY61 560 aaKnown RBP eCLIP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 TLR7Q9NYK1 1049 aaKnown RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SLC4A4Q9Y6R1 1079 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 NFAT5O94916 1531 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 COL3A1P02461 1466 aaPredicted RBP5.33□□□□□ -1.56
TRA2B-215ENST00000492417 MROH5Q6ZUA9 1318 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 ATP2B4P23634 1241 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 KIAA2012Q0VF49 1180 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 CCDC102BQ68D86 513 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 CCDC129Q6ZRS4 1044 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 ILDR2Q71H61 639 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 PROM2Q8N271 834 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 SSH3Q8TE77 659 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 FBXO3Q9UK99 471 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 DENND2AQ9ULE3 1009 aa5.33□□□□□ -1.56
TRA2B-215ENST00000492417 XDHP47989 1333 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 CLRN2A0PK11 232 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 H7C1D1 291 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 FAM184AQ8NB25 1140 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 TCEANC2Q96MN5 208 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 FHDC1Q9C0D6 1143 aaPredicted RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 MCM9Q9NXL9 1143 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 MARCH6O60337 910 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 ZNF444Q8N0Y2 327 aaPredicted RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 JAKMIP1Q96N16 626 aaKnown RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 FEZ1Q99689 392 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 MINPP1Q9UNW1 487 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 NRDCO43847 1150 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 NTSR2O95665 410 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 ATP2B1P20020 1258 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 DDR1Q08345 913 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 SART3Q15020 963 aaKnown RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 DLGAP5Q15398 846 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 IMMTQ16891 758 aaKnown RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 CPLX2Q6PUV4 134 aaKnown RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 ZGPATQ8N5A5 531 aaKnown RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 SPATA5Q8NB90 893 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 CAMKK2Q96RR4 588 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 UBAC1Q9BSL1 405 aa5.32□□□□□ -1.56
TRA2B-215ENST00000492417 SCAF8Q9UPN6 1271 aaKnown RBP5.32□□□□□ -1.56
TRA2B-215ENST00000492417 MAGEB6P1A0A0J9YX57 407 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 ZNF213O14771 459 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 MBD4O95243 580 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 TTC22Q5TAA0 569 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 PLEKHM2Q8IWE5 1019 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 TEX11Q8IYF3 940 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 CRNKL1Q9BZJ0 848 aaKnown RBP5.31□□□□□ -1.56
TRA2B-215ENST00000492417 ARMT1Q9H993 441 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 COPRSQ9NQ92 184 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 STX8Q9UNK0 236 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 SLIT3O75094 1523 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 DISP2A7MBM2 1401 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 TCP10L2B9ZVM9 353 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms