RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SH3TC2Q8TF17 1288 aa15.43■□□□□ 0.06
CACNA1C-228ENST00000492150 TESPA1A2RU30 521 aaPredicted RBP15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 UNCXA6NJT0 531 aa15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 MYCP01106 439 aaPredicted RBP15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 PDIA6Q15084 440 aa15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 SYMPKQ92797 1274 aaKnown RBP15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 WNK4Q96J92 1243 aa15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 EYA3Q99504 573 aa15.42■□□□□ 0.06
CACNA1C-228ENST00000492150 PRMT2P55345 433 aa15.41■□□□□ 0.06
CACNA1C-228ENST00000492150 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
CACNA1C-228ENST00000492150 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
CACNA1C-228ENST00000492150 ALPK3Q96L96 1907 aa15.41■□□□□ 0.06
CACNA1C-228ENST00000492150 EYSQ5T1H1 3165 aa15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 EVI5O60447 810 aa15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 GNRH1P01148 92 aa15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 NEFMP07197 916 aa15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 GJB1P08034 283 aa15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 USP17L8P0C7I0 530 aa15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 GMLQ99445 158 aa15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 UTP14AQ9BVJ6 771 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 SCAF8Q9UPN6 1271 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-228ENST00000492150 RIMBP2O15034 1052 aa15.39■□□□□ 0.05
CACNA1C-228ENST00000492150 PROSER3Q2NL68 480 aa15.39■□□□□ 0.05
CACNA1C-228ENST00000492150 SLC10A4Q96EP9 437 aa15.39■□□□□ 0.05
CACNA1C-228ENST00000492150 POLLQ9UGP5 575 aa15.39■□□□□ 0.05
CACNA1C-228ENST00000492150 ANGEL1Q9UNK9 670 aaKnown RBP15.39■□□□□ 0.05
CACNA1C-228ENST00000492150 COL1A1P02452 1464 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-228ENST00000492150 ANXA1P04083 346 aa15.38■□□□□ 0.05
CACNA1C-228ENST00000492150 CAPN2P17655 700 aa15.38■□□□□ 0.05
CACNA1C-228ENST00000492150 MTFR1Q15390 333 aa15.38■□□□□ 0.05
CACNA1C-228ENST00000492150 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
CACNA1C-228ENST00000492150 FAM109BQ6ICB4 259 aaPredicted RBP15.38■□□□□ 0.05
CACNA1C-228ENST00000492150 RAPGEFL1Q9UHV5 662 aa15.38■□□□□ 0.05
CACNA1C-228ENST00000492150 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-228ENST00000492150 C6orf229H3BNL8 230 aa15.37■□□□□ 0.05
CACNA1C-228ENST00000492150 FARP2O94887 1054 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-228ENST00000492150 HCLS1P14317 486 aaPredicted RBP15.37■□□□□ 0.05
CACNA1C-228ENST00000492150 EIF2S2P20042 333 aaKnown RBP15.37■□□□□ 0.05
CACNA1C-228ENST00000492150 BCAMP50895 628 aa15.37■□□□□ 0.05
CACNA1C-228ENST00000492150 PTPN18Q99952 460 aa15.37■□□□□ 0.05
CACNA1C-228ENST00000492150 ZSWIM8A7E2V4 1837 aa15.37■□□□□ 0.05
CACNA1C-228ENST00000492150 PRUNE2Q8WUY3 3088 aa15.36■□□□□ 0.05
CACNA1C-228ENST00000492150 NBPF9Q3BBW0 867 aa15.36■□□□□ 0.05
CACNA1C-228ENST00000492150 NLRP10Q86W26 655 aa15.36■□□□□ 0.05
CACNA1C-228ENST00000492150 TDHQ8IZJ6 230 aa15.36■□□□□ 0.05
CACNA1C-228ENST00000492150 GUCD1Q96NT3 240 aa15.36■□□□□ 0.05
CACNA1C-228ENST00000492150 TSPYL4Q9UJ04 414 aa15.36■□□□□ 0.05
CACNA1C-228ENST00000492150 PRKG1Q13976 671 aa15.35■□□□□ 0.05
CACNA1C-228ENST00000492150 SYNGAP1Q96PV0 1343 aa15.35■□□□□ 0.05
CACNA1C-228ENST00000492150 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 WNT10BO00744 389 aa15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 APOBEC3FQ8IUX4 373 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 XAGE3Q8WTP9 111 aa15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 ZC3H12CQ9C0D7 883 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 ZFYVE28Q9HCC9 887 aa15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 MAPK8IP3Q9UPT6 1336 aa15.34■□□□□ 0.05
CACNA1C-228ENST00000492150 TNFRSF10AO00220 468 aa15.33■□□□□ 0.04
CACNA1C-228ENST00000492150 MMP14P50281 582 aa15.33■□□□□ 0.04
CACNA1C-228ENST00000492150 GPSM2P81274 684 aa15.33■□□□□ 0.04
CACNA1C-228ENST00000492150 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
CACNA1C-228ENST00000492150 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
CACNA1C-228ENST00000492150 GJA5P36382 358 aa15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 AIMP1Q12904 312 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 KIF22Q14807 665 aa15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 BABAM1Q9NWV8 329 aa15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 ARIH1Q9Y4X5 557 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 COL2A1P02458 1487 aaPredicted RBP15.32■□□□□ 0.04
CACNA1C-228ENST00000492150 PPP1R12BO60237 982 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-228ENST00000492150 CCL5P13501 91 aa15.31■□□□□ 0.04
CACNA1C-228ENST00000492150 RIPK4P57078 832 aa15.31■□□□□ 0.04
CACNA1C-228ENST00000492150 TAF1CQ15572 869 aaPredicted RBP15.31■□□□□ 0.04
CACNA1C-228ENST00000492150 U2AF1L4Q8WU68 220 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-228ENST00000492150 PODXL2Q9NZ53 605 aa15.31■□□□□ 0.04
CACNA1C-228ENST00000492150 SH3TC1Q8TE82 1336 aa15.31■□□□□ 0.04
CACNA1C-228ENST00000492150 LAMA2P24043 3122 aaKnown RBP15.3■□□□□ 0.04
CACNA1C-228ENST00000492150 ZNF428Q96B54 188 aa15.3■□□□□ 0.04
CACNA1C-228ENST00000492150 RNF208Q9H0X6 261 aa15.3■□□□□ 0.04
CACNA1C-228ENST00000492150 OTOFQ9HC10 1997 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 IRS2Q9Y4H2 1338 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 G3V3G9 751 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 SGPL1O95470 568 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 GRK4P32298 578 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 MS4A4AQ96JQ5 239 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 SNX27Q96L92 541 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 ARHGAP39Q9C0H5 1083 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 ECM29Q5VYK3 1845 aa15.29■□□□□ 0.04
CACNA1C-228ENST00000492150 COL4A1P02462 1669 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 USP17L3A6NCW0 530 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 USP17L4A6NCW7 530 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 TMPOP42166 694 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 UBXN2AP68543 259 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 KRT24Q2M2I5 525 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms