RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 TUBB4BP68371 445 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 POLA2Q14181 598 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 HSP90AB4PQ58FF6 505 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 MCM10Q7L590 875 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 BANK1Q8NDB2 785 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 EPC1Q9H2F5 836 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 GOLPH3LQ9H4A5 285 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 CXorf56Q9H5V9 222 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 DONSONQ9NYP3 566 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 DLC1Q96QB1 1528 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 A0A087WUV0 522 aaPredicted RBP7.45□□□□□ -1.22
CCDC6-202ENST00000491922 HIP1O00291 1037 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 FANCGO15287 622 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 CBFA2T2O43439 604 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 FLIIQ13045 1269 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 SART3Q15020 963 aaKnown RBP7.45□□□□□ -1.22
CCDC6-202ENST00000491922 CT47A1Q5JQC4 288 aaPredicted RBP7.45□□□□□ -1.22
CCDC6-202ENST00000491922 RPAINQ86UA6 219 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 BRF1Q92994 677 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 ZNF396Q96N95 335 aaPredicted RBP7.45□□□□□ -1.22
CCDC6-202ENST00000491922 PDE11AQ9HCR9 933 aa7.45□□□□□ -1.22
CCDC6-202ENST00000491922 VWA3AA6NCI4 1184 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 SLC27A2O14975 620 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 ARHGAP6O43182 974 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 USP5P45974 858 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
CCDC6-202ENST00000491922 TADA2BQ86TJ2 420 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 TICAM2Q86XR7 235 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 FSIP1Q8NA03 581 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 FAM71BQ8TC56 605 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 MAP4K1Q92918 833 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 ACBD3Q9H3P7 528 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 PPFIA4O75335 1185 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 ADD1P35611 737 aaKnown RBP7.44□□□□□ -1.22
CCDC6-202ENST00000491922 TOB2Q14106 344 aaPredicted RBP7.44□□□□□ -1.22
CCDC6-202ENST00000491922 HSP90B2PQ58FF3 399 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 NUTM2DQ5VT03 806 aaPredicted RBP7.44□□□□□ -1.22
CCDC6-202ENST00000491922 CCDC30Q5VVM6 783 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 NAA16Q6N069 864 aaPredicted RBP7.44□□□□□ -1.22
CCDC6-202ENST00000491922 TMED8Q6PL24 325 aaPredicted RBP7.44□□□□□ -1.22
CCDC6-202ENST00000491922 GPATCH3Q96I76 525 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 PPP2R2CQ9Y2T4 447 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 SIGLEC1Q9BZZ2 1709 aa7.44□□□□□ -1.22
CCDC6-202ENST00000491922 CCDC196A0A1B0GTZ2 297 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 IKBKBO14920 756 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 ABCC6O95255 1503 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 IFIT2P09913 472 aaKnown RBP7.43□□□□□ -1.22
CCDC6-202ENST00000491922 ATP6V1AP38606 617 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 USP8P40818 1118 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 GNG11P61952 73 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 FANCCQ00597 558 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 BEND6Q5SZJ8 279 aaPredicted RBP7.43□□□□□ -1.22
CCDC6-202ENST00000491922 FOXR1Q6PIV2 292 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 LRRC31Q6UY01 552 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 POGZQ7Z3K3 1410 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 PPP1R42Q7Z4L9 355 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 ANKRD20A12PQ8NF67 263 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 DDX54Q8TDD1 881 aaKnown RBP7.43□□□□□ -1.22
CCDC6-202ENST00000491922 MRPS27Q92552 414 aaKnown RBP7.43□□□□□ -1.22
CCDC6-202ENST00000491922 EVI5LQ96CN4 794 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 SDF4Q9BRK5 362 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 UTP14AQ9BVJ6 771 aaKnown RBP7.43□□□□□ -1.22
CCDC6-202ENST00000491922 USP44Q9H0E7 712 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 SNRKQ9NRH2 765 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 HMG20BQ9P0W2 317 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 TSPYL4Q9UJ04 414 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 RAB21Q9UL25 225 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 A0A087WWV3 80 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 MYO1BO43795 1136 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 MAP2K2P36507 400 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 NLRP12P59046 1061 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 MCM6Q14566 821 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 DNAJC21Q5F1R6 531 aaKnown RBP7.43□□□□□ -1.22
CCDC6-202ENST00000491922 SULT6B1Q6IMI4 303 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 DDX11Q96FC9 970 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 COG3Q96JB2 828 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 GBP3Q9H0R5 595 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 MED4Q9NPJ6 270 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 KIAA1468Q9P260 1216 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 FAN1Q9Y2M0 1017 aa7.43□□□□□ -1.22
CCDC6-202ENST00000491922 NPHP4O75161 1426 aaPredicted RBP7.42□□□□□ -1.22
CCDC6-202ENST00000491922 PATL2C9JE40 543 aaKnown RBP7.42□□□□□ -1.22
CCDC6-202ENST00000491922 JAK2O60674 1132 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 TUBBP07437 444 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 CEBPZQ03701 1054 aaKnown RBP7.42□□□□□ -1.22
CCDC6-202ENST00000491922 STK3Q13188 491 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 E2F4Q16254 413 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 DPCR1Q3MIW9 517 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 SRGAP1Q7Z6B7 1085 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 ERC1Q8IUD2 1116 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 FMR1NBQ8N0W7 255 aaPredicted RBP7.42□□□□□ -1.22
CCDC6-202ENST00000491922 CEP112Q8N8E3 955 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 MSANTD4Q8NCY6 345 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 DNAAF4Q8WXU2 420 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 KIFC2Q96AC6 838 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 LLPHQ9BRT6 129 aaKnown RBP7.42□□□□□ -1.22
CCDC6-202ENST00000491922 ECHDC1Q9NTX5 307 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 AKAP2Q9Y2D5 859 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 CCDC9Q9Y3X0 531 aaKnown RBP7.42□□□□□ -1.22
CCDC6-202ENST00000491922 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms