RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 PRAMEF18Q5VWM3 479 aa18.66■□□□□ 0.58
SSR4-212ENST00000491833 JARID2Q92833 1246 aaPredicted RBP18.66■□□□□ 0.58
SSR4-212ENST00000491833 FBXW7Q969H0 707 aa18.66■□□□□ 0.58
SSR4-212ENST00000491833 METTL22Q9BUU2 404 aaPredicted RBP18.66■□□□□ 0.58
SSR4-212ENST00000491833 IFT57Q9NWB7 429 aa18.66■□□□□ 0.58
SSR4-212ENST00000491833 ELL2O00472 640 aaPredicted RBP18.65■□□□□ 0.58
SSR4-212ENST00000491833 GNAI1P63096 354 aa18.65■□□□□ 0.58
SSR4-212ENST00000491833 NOM1Q5C9Z4 860 aaKnown RBP18.65■□□□□ 0.58
SSR4-212ENST00000491833 ADAMTS8Q9UP79 889 aa18.65■□□□□ 0.58
SSR4-212ENST00000491833 GPR25O00155 361 aa18.64■□□□□ 0.57
SSR4-212ENST00000491833 WNT10BO00744 389 aa18.64■□□□□ 0.57
SSR4-212ENST00000491833 TM4SF4P48230 202 aa18.64■□□□□ 0.57
SSR4-212ENST00000491833 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
SSR4-212ENST00000491833 DACT2Q5SW24 774 aa18.64■□□□□ 0.57
SSR4-212ENST00000491833 FBXO46Q6PJ61 603 aaPredicted RBP18.64■□□□□ 0.57
SSR4-212ENST00000491833 BSDC1Q9NW68 430 aaPredicted RBP18.64■□□□□ 0.57
SSR4-212ENST00000491833 CCT4P50991 539 aaKnown RBP18.63■□□□□ 0.57
SSR4-212ENST00000491833 MKRN3Q13064 507 aaKnown RBP18.63■□□□□ 0.57
SSR4-212ENST00000491833 STRIP1Q5VSL9 837 aa18.63■□□□□ 0.57
SSR4-212ENST00000491833 ARMC9Q7Z3E5 817 aa18.63■□□□□ 0.57
SSR4-212ENST00000491833 MXD3Q9BW11 206 aa18.63■□□□□ 0.57
SSR4-212ENST00000491833 CHMP4AQ9BY43 222 aa18.63■□□□□ 0.57
SSR4-212ENST00000491833 COA1Q9GZY4 146 aa18.63■□□□□ 0.57
SSR4-212ENST00000491833 MINPP1Q9UNW1 487 aa18.63■□□□□ 0.57
SSR4-212ENST00000491833 SASH1O94885 1247 aa18.62■□□□□ 0.57
SSR4-212ENST00000491833 MMP14P50281 582 aa18.62■□□□□ 0.57
SSR4-212ENST00000491833 CCDC30Q5VVM6 783 aa18.62■□□□□ 0.57
SSR4-212ENST00000491833 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
SSR4-212ENST00000491833 CFHR5Q9BXR6 569 aa18.62■□□□□ 0.57
SSR4-212ENST00000491833 MAP3K2Q9Y2U5 619 aa18.62■□□□□ 0.57
SSR4-212ENST00000491833 COL1A1P02452 1464 aaPredicted RBP18.62■□□□□ 0.57
SSR4-212ENST00000491833 WTIPA6NIX2 430 aaPredicted RBP18.61■□□□□ 0.57
SSR4-212ENST00000491833 FKTNO75072 461 aa18.61■□□□□ 0.57
SSR4-212ENST00000491833 TTLL11Q8NHH1 800 aa18.61■□□□□ 0.57
SSR4-212ENST00000491833 GREM2Q9H772 168 aa18.61■□□□□ 0.57
SSR4-212ENST00000491833 NEXNQ0ZGT2 675 aa18.6■□□□□ 0.57
SSR4-212ENST00000491833 IGHMBP2P38935 993 aaKnown RBP18.59■□□□□ 0.57
SSR4-212ENST00000491833 PTPN12Q05209 780 aaKnown RBP18.59■□□□□ 0.57
SSR4-212ENST00000491833 PRKG1Q13976 671 aa18.59■□□□□ 0.57
SSR4-212ENST00000491833 KSR2Q6VAB6 950 aa18.59■□□□□ 0.57
SSR4-212ENST00000491833 C8orf58Q8NAV2 365 aa18.59■□□□□ 0.57
SSR4-212ENST00000491833 LEMD3Q9Y2U8 911 aa18.59■□□□□ 0.57
SSR4-212ENST00000491833 LAMB1P07942 1786 aa18.58■□□□□ 0.57
SSR4-212ENST00000491833 ALDH1A1P00352 501 aa18.58■□□□□ 0.56
SSR4-212ENST00000491833 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
SSR4-212ENST00000491833 KIAA0825Q8IV33 1275 aa18.58■□□□□ 0.56
SSR4-212ENST00000491833 PI4KAP2A4QPH2 592 aa18.57■□□□□ 0.56
SSR4-212ENST00000491833 APAF1O14727 1248 aa18.57■□□□□ 0.56
SSR4-212ENST00000491833 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
SSR4-212ENST00000491833 SPRYD7Q5W111 196 aa18.57■□□□□ 0.56
SSR4-212ENST00000491833 TTLL5Q6EMB2 1281 aa18.57■□□□□ 0.56
SSR4-212ENST00000491833 TXNRD3Q86VQ6 643 aa18.57■□□□□ 0.56
SSR4-212ENST00000491833 PI4KAP1Q8N8J0 262 aa18.57■□□□□ 0.56
SSR4-212ENST00000491833 ANGEL1Q9UNK9 670 aaKnown RBP18.57■□□□□ 0.56
SSR4-212ENST00000491833 ECM29Q5VYK3 1845 aa18.57■□□□□ 0.56
SSR4-212ENST00000491833 ZNF804BA4D1E1 1349 aa18.56■□□□□ 0.56
SSR4-212ENST00000491833 CWF19L2Q2TBE0 894 aaKnown RBP18.56■□□□□ 0.56
SSR4-212ENST00000491833 LDLRAD1Q5T700 205 aa18.56■□□□□ 0.56
SSR4-212ENST00000491833 GCC1Q96CN9 775 aa18.56■□□□□ 0.56
SSR4-212ENST00000491833 STK31Q9BXU1 1019 aa18.56■□□□□ 0.56
SSR4-212ENST00000491833 ANKRD2Q9GZV1 360 aa18.56■□□□□ 0.56
SSR4-212ENST00000491833 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
SSR4-212ENST00000491833 NEURL1BA8MQ27 555 aa18.55■□□□□ 0.56
SSR4-212ENST00000491833 UBE3BQ7Z3V4 1068 aa18.55■□□□□ 0.56
SSR4-212ENST00000491833 ZBED3Q96IU2 234 aaPredicted RBP18.55■□□□□ 0.56
SSR4-212ENST00000491833 R3HDMLQ9H3Y0 253 aa18.55■□□□□ 0.56
SSR4-212ENST00000491833 ITGA6P23229 1130 aa18.54■□□□□ 0.56
SSR4-212ENST00000491833 KLRK1P26718 216 aa18.54■□□□□ 0.56
SSR4-212ENST00000491833 KCNJ4P48050 445 aa18.54■□□□□ 0.56
SSR4-212ENST00000491833 GTF2IP78347 998 aa18.54■□□□□ 0.56
SSR4-212ENST00000491833 MPHOSPH8Q99549 860 aa18.54■□□□□ 0.56
SSR4-212ENST00000491833 TRIM17Q9Y577 477 aa18.54■□□□□ 0.56
SSR4-212ENST00000491833 SSC5DA1L4H1 1573 aa18.54■□□□□ 0.56
SSR4-212ENST00000491833 ZBTB48P10074 688 aaPredicted RBP18.53■□□□□ 0.56
SSR4-212ENST00000491833 INHBEP58166 350 aa18.53■□□□□ 0.56
SSR4-212ENST00000491833 MAP3K11Q16584 847 aa18.53■□□□□ 0.56
SSR4-212ENST00000491833 TSPYL6Q8N831 410 aa18.53■□□□□ 0.56
SSR4-212ENST00000491833 DEFB129Q9H1M3 183 aa18.53■□□□□ 0.56
SSR4-212ENST00000491833 FZD1Q9UP38 647 aa18.53■□□□□ 0.56
SSR4-212ENST00000491833 PPP2R3BQ9Y5P8 575 aa18.53■□□□□ 0.56
SSR4-212ENST00000491833 A0A1B0GUL6 1792 aa18.53■□□□□ 0.56
SSR4-212ENST00000491833 RBBP6Q7Z6E9 1792 aaKnown RBP18.53■□□□□ 0.56
SSR4-212ENST00000491833 DLGAP5Q15398 846 aa18.52■□□□□ 0.56
SSR4-212ENST00000491833 IFNL1Q8IU54 200 aa18.52■□□□□ 0.56
SSR4-212ENST00000491833 SLC10A4Q96EP9 437 aa18.52■□□□□ 0.56
SSR4-212ENST00000491833 PLA2G12BQ9BX93 195 aa18.52■□□□□ 0.56
SSR4-212ENST00000491833 H7C1W4 665 aa18.51■□□□□ 0.55
SSR4-212ENST00000491833 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
SSR4-212ENST00000491833 OTOP1Q7RTM1 612 aa18.51■□□□□ 0.55
SSR4-212ENST00000491833 WNK4Q96J92 1243 aa18.51■□□□□ 0.55
SSR4-212ENST00000491833 CD209Q9NNX6 404 aa18.51■□□□□ 0.55
SSR4-212ENST00000491833 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.51■□□□□ 0.55
SSR4-212ENST00000491833 MYO1BO43795 1136 aa18.5■□□□□ 0.55
SSR4-212ENST00000491833 CHRNDQ07001 517 aa18.5■□□□□ 0.55
SSR4-212ENST00000491833 INTS3Q68E01 1043 aaKnown RBP18.5■□□□□ 0.55
SSR4-212ENST00000491833 MTMR14Q8NCE2 650 aa18.5■□□□□ 0.55
SSR4-212ENST00000491833 MYH16Q9H6N6 1097 aa18.5■□□□□ 0.55
SSR4-212ENST00000491833 UNCXA6NJT0 531 aa18.49■□□□□ 0.55
SSR4-212ENST00000491833 IGF2BP3O00425 579 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSR4-212ENST00000491833 GCKRQ14397 625 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms