RNA–Protein interactions for RNA: ENST00000491816.1

PARP1-208, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 416 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-208ENST00000491816 PCSK7Q16549 785 aa9.6□□□□□ -0.87
PARP1-208ENST00000491816 FNBP4Q8N3X1 1017 aaPredicted RBP9.6□□□□□ -0.87
PARP1-208ENST00000491816 SMG9Q9H0W8 520 aaKnown RBP9.6□□□□□ -0.87
PARP1-208ENST00000491816 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
PARP1-208ENST00000491816 MICAL2O94851 1124 aa9.59□□□□□ -0.87
PARP1-208ENST00000491816 PTPRTO14522 1441 aa9.58□□□□□ -0.88
PARP1-208ENST00000491816 ARSDP51689 593 aa9.58□□□□□ -0.88
PARP1-208ENST00000491816 GPLD1P80108 840 aa9.58□□□□□ -0.88
PARP1-208ENST00000491816 IGF2-ASQ6U949 168 aa9.58□□□□□ -0.88
PARP1-208ENST00000491816 ANKMY2Q8IV38 441 aa9.58□□□□□ -0.88
PARP1-208ENST00000491816 IQSEC2Q5JU85 1478 aa9.58□□□□□ -0.88
PARP1-208ENST00000491816 C9orf84Q5VXU9 1444 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 MYO5CQ9NQX4 1742 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 PLEKHD1A6NEE1 506 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L15C9J2P7 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L10C9JJH3 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L13C9JLJ4 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L12C9JPN9 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L11C9JVI0 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L21D6R901 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L18D6R9N7 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L22D6RA61 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L17D6RBQ6 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L19D6RCP7 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L20D6RJB6 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 OPLAHO14841 1288 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 USP17L24Q0WX57 530 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 TTC9Q92623 222 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 PPP1R12CQ9BZL4 782 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 ATP10AO60312 1499 aa9.57□□□□□ -0.88
PARP1-208ENST00000491816 SCAPERQ9BY12 1400 aa9.56□□□□□ -0.88
PARP1-208ENST00000491816 J3QW42 95 aa9.56□□□□□ -0.88
PARP1-208ENST00000491816 ALX3O95076 343 aa9.56□□□□□ -0.88
PARP1-208ENST00000491816 LCE3BQ5TA77 95 aa9.56□□□□□ -0.88
PARP1-208ENST00000491816 C11orf91Q3C1V1 193 aa9.55□□□□□ -0.88
PARP1-208ENST00000491816 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
PARP1-208ENST00000491816 LRFN2Q9ULH4 789 aa9.55□□□□□ -0.88
PARP1-208ENST00000491816 RNF112Q9ULX5 631 aa9.55□□□□□ -0.88
PARP1-208ENST00000491816 RTCBQ9Y3I0 505 aaKnown RBP9.55□□□□□ -0.88
PARP1-208ENST00000491816 DLL1O00548 723 aa9.54□□□□□ -0.88
PARP1-208ENST00000491816 EIF2AK2P19525 551 aaKnown RBP9.54□□□□□ -0.88
PARP1-208ENST00000491816 WEE1P30291 646 aa9.54□□□□□ -0.88
PARP1-208ENST00000491816 PRR23CQ6ZRP0 262 aa9.54□□□□□ -0.88
PARP1-208ENST00000491816 ARXQ96QS3 562 aa9.54□□□□□ -0.88
PARP1-208ENST00000491816 TLR7Q9NYK1 1049 aaKnown RBP9.54□□□□□ -0.88
PARP1-208ENST00000491816 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
PARP1-208ENST00000491816 FAM196BA6NMK8 535 aa9.53□□□□□ -0.88
PARP1-208ENST00000491816 LMOD1P29536 600 aaPredicted RBP9.53□□□□□ -0.88
PARP1-208ENST00000491816 RANGAP1P46060 587 aaPredicted RBP9.53□□□□□ -0.88
PARP1-208ENST00000491816 NRLP54845 237 aa9.53□□□□□ -0.88
PARP1-208ENST00000491816 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
PARP1-208ENST00000491816 DIP2CQ9Y2E4 1556 aa9.53□□□□□ -0.88
PARP1-208ENST00000491816 CDK13Q14004 1512 aaKnown RBP9.52□□□□□ -0.88
PARP1-208ENST00000491816 PLCH2O75038 1416 aa9.52□□□□□ -0.89
PARP1-208ENST00000491816 CMTR1Q8N1G2 835 aaKnown RBP9.52□□□□□ -0.89
PARP1-208ENST00000491816 VTI1AQ96AJ9 217 aa9.52□□□□□ -0.89
PARP1-208ENST00000491816 PLD4Q96BZ4 506 aa9.52□□□□□ -0.89
PARP1-208ENST00000491816 CALR3Q96L12 384 aaKnown RBP9.52□□□□□ -0.89
PARP1-208ENST00000491816 C11orf16Q9NQ32 467 aa9.52□□□□□ -0.89
PARP1-208ENST00000491816 ABCA6Q8N139 1617 aa9.52□□□□□ -0.89
PARP1-208ENST00000491816 MED1Q15648 1581 aaPredicted RBP9.51□□□□□ -0.89
PARP1-208ENST00000491816 NCOA1Q15788 1441 aa9.51□□□□□ -0.89
PARP1-208ENST00000491816 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
PARP1-208ENST00000491816 SIK1P57059 783 aa9.51□□□□□ -0.89
PARP1-208ENST00000491816 GDF6Q6KF10 455 aaPredicted RBP9.51□□□□□ -0.89
PARP1-208ENST00000491816 DZIP1LQ8IYY4 767 aaKnown RBP9.51□□□□□ -0.89
PARP1-208ENST00000491816 RGL4Q8IZJ4 473 aa9.51□□□□□ -0.89
PARP1-208ENST00000491816 MYO19Q96H55 970 aa9.51□□□□□ -0.89
PARP1-208ENST00000491816 AKTIPQ9H8T0 292 aa9.51□□□□□ -0.89
PARP1-208ENST00000491816 CAMSAP1Q5T5Y3 1602 aa9.51□□□□□ -0.89
PARP1-208ENST00000491816 KDM5CP41229 1560 aa9.5□□□□□ -0.89
PARP1-208ENST00000491816 UBAP1LF5GYI3 381 aa9.5□□□□□ -0.89
PARP1-208ENST00000491816 FOXO3O43524 673 aa9.5□□□□□ -0.89
PARP1-208ENST00000491816 XYLBO75191 536 aa9.5□□□□□ -0.89
PARP1-208ENST00000491816 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
PARP1-208ENST00000491816 NSUN5Q96P11 429 aaKnown RBP9.5□□□□□ -0.89
PARP1-208ENST00000491816 REREQ9P2R6 1566 aa9.5□□□□□ -0.89
PARP1-208ENST00000491816 MMP20O60882 483 aa9.49□□□□□ -0.89
PARP1-208ENST00000491816 EGFRP00533 1210 aa9.49□□□□□ -0.89
PARP1-208ENST00000491816 TREML1Q86YW5 311 aa9.49□□□□□ -0.89
PARP1-208ENST00000491816 KCNMB2Q9Y691 235 aa9.49□□□□□ -0.89
PARP1-208ENST00000491816 KIF14Q15058 1648 aa9.49□□□□□ -0.89
PARP1-208ENST00000491816 ZNF518AQ6AHZ1 1483 aa9.48□□□□□ -0.89
PARP1-208ENST00000491816 F8W735 103 aaPredicted RBP9.48□□□□□ -0.89
PARP1-208ENST00000491816 ARID4AP29374 1257 aaPredicted RBP9.48□□□□□ -0.89
PARP1-208ENST00000491816 ZNF335Q9H4Z2 1342 aaPredicted RBP9.48□□□□□ -0.89
PARP1-208ENST00000491816 CDC42BPBQ9Y5S2 1711 aa9.48□□□□□ -0.89
PARP1-208ENST00000491816 TRAPPC8Q9Y2L5 1435 aa9.48□□□□□ -0.89
PARP1-208ENST00000491816 FSTP19883 344 aa9.47□□□□□ -0.89
PARP1-208ENST00000491816 SSTR4P31391 388 aa9.47□□□□□ -0.89
PARP1-208ENST00000491816 SETDB1Q15047 1291 aa9.47□□□□□ -0.89
PARP1-208ENST00000491816 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
PARP1-208ENST00000491816 AGGF1Q8N302 714 aaeCLIP9.47□□□□□ -0.89
PARP1-208ENST00000491816 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
PARP1-208ENST00000491816 MROH2AA6NES4 1674 aa9.46□□□□□ -0.89
PARP1-208ENST00000491816 GHRHP01286 108 aa9.46□□□□□ -0.9
PARP1-208ENST00000491816 PSAPP07602 524 aa9.46□□□□□ -0.9
PARP1-208ENST00000491816 COX20Q5RI15 118 aa9.46□□□□□ -0.9
PARP1-208ENST00000491816 EFCAB2Q5VUJ9 269 aa9.46□□□□□ -0.9
PARP1-208ENST00000491816 TMEM130Q8N3G9 435 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms