RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 IRS2Q9Y4H2 1338 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 C1QTNF8P60827 252 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 LEMD3Q9Y2U8 911 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 ZNF804BA4D1E1 1349 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 GNAI3P08754 354 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 SCNN1DP51172 638 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 PTPN12Q05209 780 aaKnown RBP11.64□□□□□ -0.55
BRCA1-219ENST00000491747 MED23Q9ULK4 1368 aa11.64□□□□□ -0.55
BRCA1-219ENST00000491747 ADAMTSL1Q8N6G6 1762 aa11.63□□□□□ -0.55
BRCA1-219ENST00000491747 CIAPIN1Q6FI81 312 aa11.63□□□□□ -0.55
BRCA1-219ENST00000491747 FTSJ3Q8IY81 847 aaKnown RBP11.63□□□□□ -0.55
BRCA1-219ENST00000491747 PSMD14O00487 310 aa11.63□□□□□ -0.55
BRCA1-219ENST00000491747 ZBTB7BO15156 539 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-219ENST00000491747 TOMM70O94826 608 aa11.63□□□□□ -0.55
BRCA1-219ENST00000491747 SHTN1A0MZ66 631 aa11.62□□□□□ -0.55
BRCA1-219ENST00000491747 EPS15P42566 896 aa11.62□□□□□ -0.55
BRCA1-219ENST00000491747 ITPRIPQ8IWB1 547 aa11.62□□□□□ -0.55
BRCA1-219ENST00000491747 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-219ENST00000491747 PA2G4Q9UQ80 394 aaKnown RBP11.62□□□□□ -0.55
BRCA1-219ENST00000491747 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-219ENST00000491747 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
BRCA1-219ENST00000491747 GMPSP49915 693 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-219ENST00000491747 ATG9AQ7Z3C6 839 aa11.62□□□□□ -0.55
BRCA1-219ENST00000491747 VGLL2Q8N8G2 317 aa11.62□□□□□ -0.55
BRCA1-219ENST00000491747 GNAI2P04899 355 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 KCNJ4P48050 445 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 RGS3P49796 1198 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-219ENST00000491747 C1orf115Q9H7X2 142 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 HACL1Q9UJ83 578 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 MROH5Q6ZUA9 1318 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 G3V3G9 751 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-219ENST00000491747 EPHX2P34913 555 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 MTX1Q13505 466 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 TNIP1Q15025 636 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 RBM46Q8TBY0 533 aaKnown RBP11.61□□□□□ -0.55
BRCA1-219ENST00000491747 SIL1Q9H173 461 aa11.61□□□□□ -0.55
BRCA1-219ENST00000491747 PNMA6EA0A0J9YXQ4 647 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 IQCA1LA6NCM1 817 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 EYA2O00167 538 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
BRCA1-219ENST00000491747 GPRC5DQ9NZD1 345 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 HDAC5Q9UQL6 1122 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 VIL1P09327 827 aaKnown RBP11.6□□□□□ -0.55
BRCA1-219ENST00000491747 METTL24Q5JXM2 366 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 PODNQ7Z5L7 613 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 MXD3Q9BW11 206 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
BRCA1-219ENST00000491747 COG6Q9Y2V7 657 aa11.6□□□□□ -0.55
BRCA1-219ENST00000491747 PDE8BO95263 885 aa11.59□□□□□ -0.55
BRCA1-219ENST00000491747 UBE4AQ14139 1066 aa11.59□□□□□ -0.55
BRCA1-219ENST00000491747 CD209Q9NNX6 404 aa11.59□□□□□ -0.55
BRCA1-219ENST00000491747 COPRSQ9NQ92 184 aa11.59□□□□□ -0.55
BRCA1-219ENST00000491747 MVPQ14764 893 aaKnown RBP11.59□□□□□ -0.55
BRCA1-219ENST00000491747 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-219ENST00000491747 CNOT7Q9UIV1 285 aaKnown RBP11.59□□□□□ -0.55
BRCA1-219ENST00000491747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-219ENST00000491747 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-219ENST00000491747 GYG1P46976 350 aa11.58□□□□□ -0.56
BRCA1-219ENST00000491747 PDE3AQ14432 1141 aa11.58□□□□□ -0.56
BRCA1-219ENST00000491747 USP17L3A6NCW0 530 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 USP17L4A6NCW7 530 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 CIAO1O76071 339 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 EGFRP00533 1210 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 FGFR2P21802 821 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 HIRAP54198 1017 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-219ENST00000491747 DACT2Q5SW24 774 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 RSBN1LQ6PCB5 846 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-219ENST00000491747 USP17L1Q7RTZ2 530 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 FAM84BQ96KN1 310 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-219ENST00000491747 GMLQ99445 158 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 IL1R1P14778 569 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 ATP8B2P98198 1209 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 POLA2Q14181 598 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 MICALL2Q8IY33 904 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 SMC1BQ8NDV3 1235 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 DPF2Q92785 391 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 ARAP2Q8WZ64 1704 aa11.57□□□□□ -0.56
BRCA1-219ENST00000491747 POLR2AP24928 1970 aaKnown RBP11.57□□□□□ -0.56
BRCA1-219ENST00000491747 GTF2IP78347 998 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 FSTL1Q12841 308 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 LDHDQ86WU2 507 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 TRPM4Q8TD43 1214 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 ADARB2Q9NS39 739 aaKnown RBP11.56□□□□□ -0.56
BRCA1-219ENST00000491747 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 ZNF609O15014 1411 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 MYH13Q9UKX3 1938 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 ZNF804AQ7Z570 1209 aa11.56□□□□□ -0.56
BRCA1-219ENST00000491747 PNMA8AQ86V59 439 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms