RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 FAM35AQ86V20 835 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 GALNT12Q8IXK2 581 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 Q8N3U1 123 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 FBF1Q8TES7 1133 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 GIPC2Q8TF65 315 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 CCDC74AQ96AQ1 378 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 LATS2Q9NRM7 1088 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 SALL4Q9UJQ4 1053 aa6.92□□□□□ -1.3
RTN4-215ENST00000491592 E9PSI1 815 aa6.91□□□□□ -1.3
RTN4-215ENST00000491592 PRPF40AO75400 957 aaKnown RBP6.91□□□□□ -1.3
RTN4-215ENST00000491592 GHRHP01286 108 aa6.91□□□□□ -1.3
RTN4-215ENST00000491592 ACPPP15309 386 aa6.91□□□□□ -1.3
RTN4-215ENST00000491592 DGKGP49619 791 aa6.91□□□□□ -1.3
RTN4-215ENST00000491592 ALG1LQ6GMV1 187 aa6.91□□□□□ -1.3
RTN4-215ENST00000491592 SPACA7Q96KW9 195 aa6.91□□□□□ -1.3
RTN4-215ENST00000491592 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
RTN4-215ENST00000491592 LOC102724428A0A0B4J2F2 783 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 J3QW42 95 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 ALAS2P22557 587 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 SIK1P57059 783 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 FGD1P98174 961 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 ATP11AP98196 1134 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 PERM1Q5SV97 790 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.3
RTN4-215ENST00000491592 CHSY3Q70JA7 882 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 CD163Q86VB7 1156 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 UBE2Q2Q8WVN8 375 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 POLR3GLQ9BT43 218 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 RBSNQ9H1K0 784 aa6.9□□□□□ -1.3
RTN4-215ENST00000491592 TAGLNQ01995 201 aaKnown RBP6.89□□□□□ -1.31
RTN4-215ENST00000491592 PSAPL1Q6NUJ1 521 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 ELMSAN1Q6PJG2 1045 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 PI16Q6UXB8 463 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 CEP120Q8N960 986 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 EPS8L3Q8TE67 593 aaKnown RBP6.89□□□□□ -1.31
RTN4-215ENST00000491592 ZKSCAN3Q9BRR0 538 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 FRRS1LQ9P0K9 344 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 STARD13Q9Y3M8 1113 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 DCAF1Q9Y4B6 1507 aa6.89□□□□□ -1.31
RTN4-215ENST00000491592 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
RTN4-215ENST00000491592 ALBP02768 609 aa6.88□□□□□ -1.31
RTN4-215ENST00000491592 ZNF16P17020 682 aaPredicted RBP6.88□□□□□ -1.31
RTN4-215ENST00000491592 PLD4Q96BZ4 506 aa6.88□□□□□ -1.31
RTN4-215ENST00000491592 DUSP9Q99956 384 aaKnown RBP6.88□□□□□ -1.31
RTN4-215ENST00000491592 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
RTN4-215ENST00000491592 RASSF4Q9H2L5 321 aa6.88□□□□□ -1.31
RTN4-215ENST00000491592 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
RTN4-215ENST00000491592 A0A1W2PP55 124 aa6.87□□□□□ -1.31
RTN4-215ENST00000491592 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
RTN4-215ENST00000491592 CHRNA4P43681 627 aa6.87□□□□□ -1.31
RTN4-215ENST00000491592 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
RTN4-215ENST00000491592 ZNF326Q5BKZ1 582 aaKnown RBP6.87□□□□□ -1.31
RTN4-215ENST00000491592 HHIPQ96QV1 700 aa6.87□□□□□ -1.31
RTN4-215ENST00000491592 OSMRQ99650 979 aa6.87□□□□□ -1.31
RTN4-215ENST00000491592 PBX4Q9BYU1 374 aa6.87□□□□□ -1.31
RTN4-215ENST00000491592 JPH1Q9HDC5 661 aaPredicted RBP6.87□□□□□ -1.31
RTN4-215ENST00000491592 DZANK1Q9NVP4 752 aa6.87□□□□□ -1.31
RTN4-215ENST00000491592 M0R082 166 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 TRPA1O75762 1119 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 SMNDC1O75940 238 aaKnown RBP eCLIP6.86□□□□□ -1.312e-15■■■□□ 16
RTN4-215ENST00000491592 GNA15P30679 374 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 ZEB1P37275 1124 aaPredicted RBP6.86□□□□□ -1.31
RTN4-215ENST00000491592 KIAA0319Q5VV43 1072 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 MICALL1Q8N3F8 863 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 NUDT8Q8WV74 236 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
RTN4-215ENST00000491592 PCGF6Q9BYE7 350 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 BHLHE41Q9C0J9 482 aaPredicted RBP6.86□□□□□ -1.31
RTN4-215ENST00000491592 EHD4Q9H223 541 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 RNF19AQ9NV58 838 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 SPG7Q9UQ90 795 aa6.86□□□□□ -1.31
RTN4-215ENST00000491592 NFKBIEO00221 500 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 RGS9O75916 674 aaPredicted RBP6.85□□□□□ -1.31
RTN4-215ENST00000491592 GATA4P43694 442 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 GRM2Q14416 872 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 CEP135Q66GS9 1140 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 PRPF40BQ6NWY9 871 aaKnown RBP6.85□□□□□ -1.31
RTN4-215ENST00000491592 C20orf204Q6ZNR8 217 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 TMEM102Q8N9M5 508 aaPredicted RBP6.85□□□□□ -1.31
RTN4-215ENST00000491592 TCF12Q99081 682 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 LIN7BQ9HAP6 207 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 PARP2Q9UGN5 583 aa6.85□□□□□ -1.31
RTN4-215ENST00000491592 SPDYE3A6NKU9 549 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 PDE2AO00408 941 aaPredicted RBP6.84□□□□□ -1.31
RTN4-215ENST00000491592 SPATA31C1P0DKV0 1188 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 XPCQ01831 940 aaPredicted RBP6.84□□□□□ -1.31
RTN4-215ENST00000491592 C8orf86Q6ZUL3 223 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 CCNJLQ8IV13 435 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 FAM161BQ96MY7 647 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 SEMA6BQ9H3T3 888 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 TRIM33Q9UPN9 1127 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 TRAK1Q9UPV9 953 aa6.84□□□□□ -1.31
RTN4-215ENST00000491592 LILRB5O75023 590 aa6.83□□□□□ -1.32
RTN4-215ENST00000491592 DAB2P98082 770 aa6.83□□□□□ -1.32
RTN4-215ENST00000491592 PSMD2Q13200 908 aa6.83□□□□□ -1.32
RTN4-215ENST00000491592 DOC2BQ14184 412 aa6.83□□□□□ -1.32
RTN4-215ENST00000491592 GRIK5Q16478 980 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms