RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 JAG2Q9Y219 1238 aa11.4□□□□□ -0.58
HDAC3-211ENST00000491581 CCT4P50991 539 aaKnown RBP11.39□□□□□ -0.59
HDAC3-211ENST00000491581 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
HDAC3-211ENST00000491581 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
HDAC3-211ENST00000491581 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-211ENST00000491581 KRT26Q7Z3Y9 468 aa11.39□□□□□ -0.59
HDAC3-211ENST00000491581 WDR63Q8IWG1 891 aa11.39□□□□□ -0.59
HDAC3-211ENST00000491581 DPF2Q92785 391 aa11.39□□□□□ -0.59
HDAC3-211ENST00000491581 GMLQ99445 158 aa11.39□□□□□ -0.59
HDAC3-211ENST00000491581 FZD1Q9UP38 647 aa11.39□□□□□ -0.59
HDAC3-211ENST00000491581 AOX1Q06278 1338 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 CASP8AP2Q9UKL3 1982 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 SASH1O94885 1247 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 SCARF1Q14162 830 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 CDC37L1Q7L3B6 337 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 LINS1Q8NG48 757 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 BSDC1Q9NW68 430 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-211ENST00000491581 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
HDAC3-211ENST00000491581 ZNF521Q96K83 1311 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 PLIN1O60240 522 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 CSF1RP07333 972 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 ATP2B4P23634 1241 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-211ENST00000491581 HUNKP57058 714 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 CHRNDQ07001 517 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 DACT2Q5SW24 774 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 KAZALD1Q96I82 304 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
HDAC3-211ENST00000491581 MED23Q9ULK4 1368 aa11.37□□□□□ -0.59
HDAC3-211ENST00000491581 IRS2Q9Y4H2 1338 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 USP17L3A6NCW0 530 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 USP17L4A6NCW7 530 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 FAM155AB1AL88 458 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-211ENST00000491581 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 USP17L1Q7RTZ2 530 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 CERS5Q8N5B7 392 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 ZC3H15Q8WU90 426 aaKnown RBP11.36□□□□□ -0.59
HDAC3-211ENST00000491581 SUCLG2Q96I99 432 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 PLA2G12BQ9BX93 195 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 PUS3Q9BZE2 481 aaKnown RBP11.36□□□□□ -0.59
HDAC3-211ENST00000491581 MYOZ2Q9NPC6 264 aa11.36□□□□□ -0.59
HDAC3-211ENST00000491581 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-211ENST00000491581 ZNF804BA4D1E1 1349 aa11.35□□□□□ -0.59
HDAC3-211ENST00000491581 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-211ENST00000491581 USP17L8P0C7I0 530 aa11.35□□□□□ -0.59
HDAC3-211ENST00000491581 RPS12P25398 132 aaKnown RBP11.35□□□□□ -0.59
HDAC3-211ENST00000491581 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
HDAC3-211ENST00000491581 ZNF280AP59817 542 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-211ENST00000491581 GTF2IP78347 998 aa11.35□□□□□ -0.59
HDAC3-211ENST00000491581 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
HDAC3-211ENST00000491581 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
HDAC3-211ENST00000491581 GBA2Q9HCG7 927 aaPredicted RBP11.35□□□□□ -0.59
HDAC3-211ENST00000491581 F8W031 263 aaPredicted RBP11.34□□□□□ -0.59
HDAC3-211ENST00000491581 PRKG1Q13976 671 aa11.34□□□□□ -0.59
HDAC3-211ENST00000491581 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
HDAC3-211ENST00000491581 KLHDC4Q8TBB5 520 aa11.34□□□□□ -0.59
HDAC3-211ENST00000491581 MPHOSPH8Q99549 860 aa11.34□□□□□ -0.59
HDAC3-211ENST00000491581 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
HDAC3-211ENST00000491581 ECM29Q5VYK3 1845 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 ANKRD18BA2A2Z9 1011 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 GRM8O00222 908 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
HDAC3-211ENST00000491581 ECE1P42892 770 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 MAP2K1Q02750 393 aaPredicted RBP11.33□□□□□ -0.6
HDAC3-211ENST00000491581 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
HDAC3-211ENST00000491581 PODNQ7Z5L7 613 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 AGBL3Q8NEM8 1001 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 PRDM10Q9NQV6 1147 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 ZNF609O15014 1411 aa11.33□□□□□ -0.6
HDAC3-211ENST00000491581 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 WNT10BO00744 389 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 KCNJ4P48050 445 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 KIF23Q02241 960 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-211ENST00000491581 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
HDAC3-211ENST00000491581 GRIK5Q16478 980 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 TTLL5Q6EMB2 1281 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 RGMBQ6NW40 437 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 SSH1Q8WYL5 1049 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 CD209Q9NNX6 404 aa11.32□□□□□ -0.6
HDAC3-211ENST00000491581 IQSEC3Q9UPP2 1182 aaPredicted RBP11.32□□□□□ -0.6
HDAC3-211ENST00000491581 PAPPA2Q9BXP8 1791 aa11.31□□□□□ -0.6
HDAC3-211ENST00000491581 AKAP11Q9UKA4 1901 aa11.31□□□□□ -0.6
HDAC3-211ENST00000491581 GYG1P46976 350 aa11.31□□□□□ -0.6
HDAC3-211ENST00000491581 ZNF157P51786 506 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-211ENST00000491581 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
HDAC3-211ENST00000491581 COA1Q9GZY4 146 aa11.31□□□□□ -0.6
HDAC3-211ENST00000491581 BICC1Q9H694 974 aaKnown RBP11.31□□□□□ -0.6
HDAC3-211ENST00000491581 C9orf78Q9NZ63 289 aaPredicted RBP11.31□□□□□ -0.6
HDAC3-211ENST00000491581 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
HDAC3-211ENST00000491581 ARAP2Q8WZ64 1704 aa11.3□□□□□ -0.6
HDAC3-211ENST00000491581 SSC5DA1L4H1 1573 aa11.3□□□□□ -0.6
HDAC3-211ENST00000491581 CLRN2A0PK11 232 aa11.3□□□□□ -0.6
HDAC3-211ENST00000491581 MAP2K2P36507 400 aa11.3□□□□□ -0.6
HDAC3-211ENST00000491581 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms