RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 BICC1Q9H694 974 aaKnown RBP16.6■□□□□ 0.25
NUP188-208ENST00000491502 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
NUP188-208ENST00000491502 COL4A1P02462 1669 aa16.59■□□□□ 0.25
NUP188-208ENST00000491502 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
NUP188-208ENST00000491502 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
NUP188-208ENST00000491502 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
NUP188-208ENST00000491502 FAM161AQ3B820 660 aa16.59■□□□□ 0.25
NUP188-208ENST00000491502 LMBR1LQ6UX01 489 aa16.59■□□□□ 0.25
NUP188-208ENST00000491502 ANKRD2Q9GZV1 360 aa16.59■□□□□ 0.25
NUP188-208ENST00000491502 RAD17O75943 681 aa16.58■□□□□ 0.24
NUP188-208ENST00000491502 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.247e-7■■■■□ 20.9
NUP188-208ENST00000491502 CCDC57Q2TAC2 916 aa16.58■□□□□ 0.24
NUP188-208ENST00000491502 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
NUP188-208ENST00000491502 KIF1BPQ96EK5 621 aa16.58■□□□□ 0.24
NUP188-208ENST00000491502 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
NUP188-208ENST00000491502 LEMD3Q9Y2U8 911 aa16.58■□□□□ 0.24
NUP188-208ENST00000491502 NOP58Q9Y2X3 529 aaKnown RBP16.58■□□□□ 0.24
NUP188-208ENST00000491502 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.24
NUP188-208ENST00000491502 LTBP1Q14766 1721 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 YDJCA8MPS7 323 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 ECE2O60344 883 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 SCNN1DP51172 638 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 EAPPQ56P03 285 aaPredicted RBP16.57■□□□□ 0.24
NUP188-208ENST00000491502 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
NUP188-208ENST00000491502 EIF5BO60841 1220 aaKnown RBP16.56■□□□□ 0.24
NUP188-208ENST00000491502 EPS15P42566 896 aa16.56■□□□□ 0.24
NUP188-208ENST00000491502 GMPSP49915 693 aaPredicted RBP16.56■□□□□ 0.24
NUP188-208ENST00000491502 TAF7LQ5H9L4 462 aa16.56■□□□□ 0.24
NUP188-208ENST00000491502 EPHA10Q5JZY3 1008 aa16.56■□□□□ 0.24
NUP188-208ENST00000491502 USP50Q70EL3 339 aaPredicted RBP16.56■□□□□ 0.24
NUP188-208ENST00000491502 POTEIP0CG38 1075 aa16.55■□□□□ 0.24
NUP188-208ENST00000491502 POTEJP0CG39 1038 aa16.55■□□□□ 0.24
NUP188-208ENST00000491502 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
NUP188-208ENST00000491502 DPF2Q92785 391 aa16.55■□□□□ 0.24
NUP188-208ENST00000491502 ADARB2Q9NS39 739 aaKnown RBP16.55■□□□□ 0.24
NUP188-208ENST00000491502 EXOC6BQ9Y2D4 811 aa16.55■□□□□ 0.24
NUP188-208ENST00000491502 H7C1D1 291 aa16.54■□□□□ 0.24
NUP188-208ENST00000491502 PSMD14O00487 310 aa16.54■□□□□ 0.24
NUP188-208ENST00000491502 RPS12P25398 132 aaKnown RBP16.54■□□□□ 0.24
NUP188-208ENST00000491502 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
NUP188-208ENST00000491502 KAZALD1Q96I82 304 aa16.54■□□□□ 0.24
NUP188-208ENST00000491502 GPR101Q96P66 508 aaPredicted RBP16.54■□□□□ 0.24
NUP188-208ENST00000491502 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
NUP188-208ENST00000491502 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
NUP188-208ENST00000491502 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
NUP188-208ENST00000491502 ZNF804BA4D1E1 1349 aa16.53■□□□□ 0.24
NUP188-208ENST00000491502 APBB1O00213 710 aa16.53■□□□□ 0.24
NUP188-208ENST00000491502 KCNJ4P48050 445 aa16.53■□□□□ 0.24
NUP188-208ENST00000491502 CHRNDQ07001 517 aa16.53■□□□□ 0.24
NUP188-208ENST00000491502 CNOT7Q9UIV1 285 aaKnown RBP16.53■□□□□ 0.24
NUP188-208ENST00000491502 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.24
NUP188-208ENST00000491502 CLASRPQ8N2M8 674 aaKnown RBP16.52■□□□□ 0.24
NUP188-208ENST00000491502 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
NUP188-208ENST00000491502 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
NUP188-208ENST00000491502 COA1Q9GZY4 146 aa16.52■□□□□ 0.24
NUP188-208ENST00000491502 CNNM1Q9NRU3 951 aa16.52■□□□□ 0.24
NUP188-208ENST00000491502 SPEF2Q9C093 1822 aa16.52■□□□□ 0.23
NUP188-208ENST00000491502 PDE4AP27815 886 aa16.51■□□□□ 0.23
NUP188-208ENST00000491502 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
NUP188-208ENST00000491502 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
NUP188-208ENST00000491502 KCNQ5Q9NR82 932 aa16.51■□□□□ 0.23
NUP188-208ENST00000491502 USP17L3A6NCW0 530 aa16.5■□□□□ 0.23
NUP188-208ENST00000491502 USP17L4A6NCW7 530 aa16.5■□□□□ 0.23
NUP188-208ENST00000491502 ITGBL1O95965 494 aaPredicted RBP16.5■□□□□ 0.23
NUP188-208ENST00000491502 C15orf52Q6ZUT6 534 aaKnown RBP16.5■□□□□ 0.23
NUP188-208ENST00000491502 USP17L1Q7RTZ2 530 aa16.5■□□□□ 0.23
NUP188-208ENST00000491502 AGBL3Q8NEM8 1001 aa16.5■□□□□ 0.23
NUP188-208ENST00000491502 ZC3H15Q8WU90 426 aaKnown RBP16.5■□□□□ 0.23
NUP188-208ENST00000491502 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
NUP188-208ENST00000491502 AOX1Q06278 1338 aa16.49■□□□□ 0.23
NUP188-208ENST00000491502 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
NUP188-208ENST00000491502 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
NUP188-208ENST00000491502 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
NUP188-208ENST00000491502 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
NUP188-208ENST00000491502 MAP1SQ66K74 1059 aaPredicted RBP16.49■□□□□ 0.23
NUP188-208ENST00000491502 RSBN1LQ6PCB5 846 aaPredicted RBP16.49■□□□□ 0.23
NUP188-208ENST00000491502 MICALL2Q8IY33 904 aa16.49■□□□□ 0.23
NUP188-208ENST00000491502 DNAJC5GQ8N7S2 189 aa16.49■□□□□ 0.23
NUP188-208ENST00000491502 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
NUP188-208ENST00000491502 SMARCA5O60264 1052 aaPredicted RBP16.48■□□□□ 0.23
NUP188-208ENST00000491502 TAF5LO75529 589 aa16.48■□□□□ 0.23
NUP188-208ENST00000491502 CIAO1O76071 339 aa16.48■□□□□ 0.23
NUP188-208ENST00000491502 IFIT2P09913 472 aaKnown RBP16.48■□□□□ 0.23
NUP188-208ENST00000491502 IL15P40933 162 aaPredicted RBP16.48■□□□□ 0.23
NUP188-208ENST00000491502 PTPN12Q05209 780 aaKnown RBP16.48■□□□□ 0.23
NUP188-208ENST00000491502 SKAP1Q86WV1 359 aa16.48■□□□□ 0.23
NUP188-208ENST00000491502 PLEKHM2Q8IWE5 1019 aa16.48■□□□□ 0.23
NUP188-208ENST00000491502 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
NUP188-208ENST00000491502 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
NUP188-208ENST00000491502 PGAP2Q9UHJ9 254 aa16.48■□□□□ 0.23
NUP188-208ENST00000491502 MROH5Q6ZUA9 1318 aa16.47■□□□□ 0.23
NUP188-208ENST00000491502 MX1P20591 662 aa16.47■□□□□ 0.23
NUP188-208ENST00000491502 RFX5P48382 616 aaPredicted RBP16.47■□□□□ 0.23
NUP188-208ENST00000491502 MMP14P50281 582 aa16.47■□□□□ 0.23
NUP188-208ENST00000491502 UBE4AQ14139 1066 aa16.47■□□□□ 0.23
NUP188-208ENST00000491502 TXNRD3Q86VQ6 643 aa16.47■□□□□ 0.23
NUP188-208ENST00000491502 BACH2Q9BYV9 841 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms