RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 GPATCH3Q96I76 525 aa26.63■■□□□ 1.85
VCPKMT-204ENST00000491402 TTC41PQ6P2S7 1318 aa26.63■■□□□ 1.85
VCPKMT-204ENST00000491402 IFIT1P09914 478 aaKnown RBP26.63■■□□□ 1.85
VCPKMT-204ENST00000491402 KCNJ4P48050 445 aa26.63■■□□□ 1.85
VCPKMT-204ENST00000491402 ARHGAP27Q6ZUM4 889 aa26.63■■□□□ 1.85
VCPKMT-204ENST00000491402 PODXL2Q9NZ53 605 aa26.63■■□□□ 1.85
VCPKMT-204ENST00000491402 ZNF804BA4D1E1 1349 aa26.63■■□□□ 1.85
VCPKMT-204ENST00000491402 ECHDC1Q9NTX5 307 aa26.62■■□□□ 1.85
VCPKMT-204ENST00000491402 LEMD3Q9Y2U8 911 aa26.62■■□□□ 1.85
VCPKMT-204ENST00000491402 CCDC93Q567U6 631 aa26.61■■□□□ 1.85
VCPKMT-204ENST00000491402 SOGA3Q5TF21 947 aa26.61■■□□□ 1.85
VCPKMT-204ENST00000491402 AOX1Q06278 1338 aa26.61■■□□□ 1.85
VCPKMT-204ENST00000491402 DCAF8L1A6NGE4 600 aa26.61■■□□□ 1.85
VCPKMT-204ENST00000491402 CC2D2BQ6DHV5 1058 aa26.61■■□□□ 1.85
VCPKMT-204ENST00000491402 DUOX1Q9NRD9 1551 aa26.6■■□□□ 1.85
VCPKMT-204ENST00000491402 GRIN3BO60391 1043 aa26.6■■□□□ 1.85
VCPKMT-204ENST00000491402 PI4K2BQ8TCG2 481 aa26.6■■□□□ 1.85
VCPKMT-204ENST00000491402 GORABQ5T7V8 394 aa26.59■■□□□ 1.85
VCPKMT-204ENST00000491402 GGA1Q9UJY5 639 aa26.59■■□□□ 1.85
VCPKMT-204ENST00000491402 UFL1O94874 794 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 ATP2B4P23634 1241 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 RTKN2Q8IZC4 609 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 MPNDQ8N594 471 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 SNED1Q8TER0 1413 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 ERC2O15083 957 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 KLRK1P26718 216 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 TBC1D16Q8TBP0 767 aa26.58■■□□□ 1.85
VCPKMT-204ENST00000491402 CCDC158Q5M9N0 1113 aa26.57■■□□□ 1.84
VCPKMT-204ENST00000491402 TTC22Q5TAA0 569 aa26.57■■□□□ 1.84
VCPKMT-204ENST00000491402 DPP8Q6V1X1 898 aaPredicted RBP26.57■■□□□ 1.84
VCPKMT-204ENST00000491402 POLLQ9UGP5 575 aa26.57■■□□□ 1.84
VCPKMT-204ENST00000491402 NFKBIEO00221 500 aa26.56■■□□□ 1.84
VCPKMT-204ENST00000491402 GLRX3O76003 335 aaKnown RBP26.56■■□□□ 1.84
VCPKMT-204ENST00000491402 IRS2Q9Y4H2 1338 aa26.56■■□□□ 1.84
VCPKMT-204ENST00000491402 GSPT1P15170 499 aaKnown RBP26.56■■□□□ 1.84
VCPKMT-204ENST00000491402 ATP5JP18859 108 aa26.56■■□□□ 1.84
VCPKMT-204ENST00000491402 CCDC102BQ68D86 513 aa26.56■■□□□ 1.84
VCPKMT-204ENST00000491402 PHKA1P46020 1223 aa26.55■■□□□ 1.84
VCPKMT-204ENST00000491402 C6orf229H3BNL8 230 aa26.54■■□□□ 1.84
VCPKMT-204ENST00000491402 RASSF7Q02833 373 aa26.54■■□□□ 1.84
VCPKMT-204ENST00000491402 GRIPAP1Q4V328 841 aa26.54■■□□□ 1.84
VCPKMT-204ENST00000491402 TTC39AQ5SRH9 613 aa26.54■■□□□ 1.84
VCPKMT-204ENST00000491402 GPR101Q96P66 508 aaPredicted RBP26.54■■□□□ 1.84
VCPKMT-204ENST00000491402 FER1L6Q2WGJ9 1857 aa26.54■■□□□ 1.84
VCPKMT-204ENST00000491402 GYG1P46976 350 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 BCAMP50895 628 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 CAVIN4Q5BKX8 364 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 BMP2KLQ5H9B9 411 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 C15orf52Q6ZUT6 534 aaKnown RBP26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 TXNRD3Q86VQ6 643 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 TAOK3Q9H2K8 898 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 AKAP11Q9UKA4 1901 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 FKBP4Q02790 459 aaKnown RBP eCLIP26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 FAM84BQ96KN1 310 aaPredicted RBP26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 BOLA2Q9H3K6 86 aa26.53■■□□□ 1.84
VCPKMT-204ENST00000491402 MED23Q9ULK4 1368 aa26.52■■□□□ 1.84
VCPKMT-204ENST00000491402 ZNF512BQ96KM6 892 aaPredicted RBP26.52■■□□□ 1.84
VCPKMT-204ENST00000491402 AK9Q5TCS8 1911 aa26.51■■□□□ 1.84
VCPKMT-204ENST00000491402 ARID4AP29374 1257 aaPredicted RBP26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 PSMD1Q99460 953 aa26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 RTFDC1Q9BY42 306 aaPredicted RBP26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 MYH13Q9UKX3 1938 aa26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 FBXO33Q7Z6M2 555 aa26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 VPS37DQ86XT2 251 aa26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 ZNF277Q9NRM2 450 aaPredicted RBP26.51■■□□□ 1.83
VCPKMT-204ENST00000491402 UQCRFS1P1P0C7P4 283 aa26.5■■□□□ 1.83
VCPKMT-204ENST00000491402 HIBADHP31937 336 aaKnown RBP26.49■■□□□ 1.83
VCPKMT-204ENST00000491402 PRELPP51888 382 aa26.49■■□□□ 1.83
VCPKMT-204ENST00000491402 SCARF1Q14162 830 aa26.49■■□□□ 1.83
VCPKMT-204ENST00000491402 HAUS7Q99871 368 aa26.49■■□□□ 1.83
VCPKMT-204ENST00000491402 MCAMP43121 646 aa26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 LTBP3Q9NS15 1303 aa26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 MAP4K4O95819 1239 aaPredicted RBP26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 SDSP20132 328 aa26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 SUPT20HQ8NEM7 779 aa26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 EYA3Q99504 573 aa26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 GNL3LQ9NVN8 582 aaKnown RBP26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 NDUFB9Q9Y6M9 179 aa26.48■■□□□ 1.83
VCPKMT-204ENST00000491402 RASGRF1Q13972 1273 aa26.47■■□□□ 1.83
VCPKMT-204ENST00000491402 WASHC4Q2M389 1173 aa26.47■■□□□ 1.83
VCPKMT-204ENST00000491402 ZNF804AQ7Z570 1209 aa26.47■■□□□ 1.83
VCPKMT-204ENST00000491402 DNAJC2Q99543 621 aaKnown RBP26.47■■□□□ 1.83
VCPKMT-204ENST00000491402 TRIM6-TRIM34B2RNG4 842 aa26.46■■□□□ 1.83
VCPKMT-204ENST00000491402 RIMBP2O15034 1052 aa26.46■■□□□ 1.83
VCPKMT-204ENST00000491402 PI16Q6UXB8 463 aa26.46■■□□□ 1.83
VCPKMT-204ENST00000491402 ZC3H12CQ9C0D7 883 aaKnown RBP26.46■■□□□ 1.83
VCPKMT-204ENST00000491402 IQSEC3Q9UPP2 1182 aaPredicted RBP26.46■■□□□ 1.83
VCPKMT-204ENST00000491402 LMNB1P20700 586 aa26.45■■□□□ 1.82
VCPKMT-204ENST00000491402 CCDC88AQ3V6T2 1871 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 IARSP41252 1262 aaKnown RBP26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 AOC3Q16853 763 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 CNTROBQ8N137 903 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 SPATA5Q8NB90 893 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 RILPL2Q969X0 211 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 EDC3Q96F86 508 aaKnown RBP26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 SNRKQ9NRH2 765 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 HMG20BQ9P0W2 317 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 SBF1O95248 1867 aa26.44■■□□□ 1.82
VCPKMT-204ENST00000491402 COL1A1P02452 1464 aaPredicted RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms