RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CTCFP49711 727 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-217ENST00000491330 CHRNDQ07001 517 aa20.87■□□□□ 0.93
PDLIM2-217ENST00000491330 SLFN5Q08AF3 891 aa20.87■□□□□ 0.93
PDLIM2-217ENST00000491330 STRIP1Q5VSL9 837 aa20.87■□□□□ 0.93
PDLIM2-217ENST00000491330 ALDH1L2Q3SY69 923 aa20.86■□□□□ 0.93
PDLIM2-217ENST00000491330 ZNF804AQ7Z570 1209 aa20.86■□□□□ 0.93
PDLIM2-217ENST00000491330 HHIPL1Q96JK4 782 aa20.86■□□□□ 0.93
PDLIM2-217ENST00000491330 CAPNS2Q96L46 248 aa20.86■□□□□ 0.93
PDLIM2-217ENST00000491330 ADAMTSL1Q8N6G6 1762 aa20.86■□□□□ 0.93
PDLIM2-217ENST00000491330 FOXO4P98177 505 aa20.85■□□□□ 0.93
PDLIM2-217ENST00000491330 CST9Q5W186 159 aa20.85■□□□□ 0.93
PDLIM2-217ENST00000491330 TTLL5Q6EMB2 1281 aa20.85■□□□□ 0.93
PDLIM2-217ENST00000491330 TNS4Q8IZW8 715 aa20.85■□□□□ 0.93
PDLIM2-217ENST00000491330 MYOZ2Q9NPC6 264 aa20.85■□□□□ 0.93
PDLIM2-217ENST00000491330 TAF1P21675 1872 aa20.85■□□□□ 0.93
PDLIM2-217ENST00000491330 MAP2K2P36507 400 aa20.84■□□□□ 0.93
PDLIM2-217ENST00000491330 ZNF280AP59817 542 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-217ENST00000491330 MRPL50Q8N5N7 158 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-217ENST00000491330 SMC4Q9NTJ3 1288 aa20.84■□□□□ 0.93
PDLIM2-217ENST00000491330 SCARF1Q14162 830 aa20.83■□□□□ 0.93
PDLIM2-217ENST00000491330 SAPCD2Q86UD0 394 aa20.83■□□□□ 0.93
PDLIM2-217ENST00000491330 GGA3Q9NZ52 723 aa20.83■□□□□ 0.93
PDLIM2-217ENST00000491330 LTBP1Q14766 1721 aa20.83■□□□□ 0.92
PDLIM2-217ENST00000491330 SHTN1A0MZ66 631 aa20.82■□□□□ 0.92
PDLIM2-217ENST00000491330 PLIN1O60240 522 aa20.82■□□□□ 0.92
PDLIM2-217ENST00000491330 NF2P35240 595 aa20.82■□□□□ 0.92
PDLIM2-217ENST00000491330 WBP1LQ9NX94 342 aa20.82■□□□□ 0.92
PDLIM2-217ENST00000491330 ZNF609O15014 1411 aa20.81■□□□□ 0.92
PDLIM2-217ENST00000491330 HUNKP57058 714 aa20.81■□□□□ 0.92
PDLIM2-217ENST00000491330 FMR1Q06787 632 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDLIM2-217ENST00000491330 COL13A1Q5TAT6 717 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-217ENST00000491330 CYP4F22Q6NT55 531 aa20.81■□□□□ 0.92
PDLIM2-217ENST00000491330 SSH1Q8WYL5 1049 aa20.81■□□□□ 0.92
PDLIM2-217ENST00000491330 GBA2Q9HCG7 927 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-217ENST00000491330 CA12O43570 354 aa20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 GTF2IP78347 998 aa20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 DACT2Q5SW24 774 aa20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 ANGEL2Q5VTE6 544 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 C15orf52Q6ZUT6 534 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 CCDC102AQ96A19 550 aa20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 MYH3P11055 1940 aa20.8■□□□□ 0.92
PDLIM2-217ENST00000491330 TAF5LO75529 589 aa20.79■□□□□ 0.92
PDLIM2-217ENST00000491330 NOGQ13253 232 aa20.79■□□□□ 0.92
PDLIM2-217ENST00000491330 VPS37DQ86XT2 251 aa20.79■□□□□ 0.92
PDLIM2-217ENST00000491330 HELBQ8NG08 1087 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-217ENST00000491330 GMLQ99445 158 aa20.79■□□□□ 0.92
PDLIM2-217ENST00000491330 API5Q9BZZ5 524 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-217ENST00000491330 CD209Q9NNX6 404 aa20.79■□□□□ 0.92
PDLIM2-217ENST00000491330 MROH5Q6ZUA9 1318 aa20.78■□□□□ 0.92
PDLIM2-217ENST00000491330 PITPNM2Q9BZ72 1349 aa20.78■□□□□ 0.92
PDLIM2-217ENST00000491330 MYO1BO43795 1136 aa20.78■□□□□ 0.92
PDLIM2-217ENST00000491330 FKBP1BP68106 108 aa20.78■□□□□ 0.92
PDLIM2-217ENST00000491330 UBE4AQ14139 1066 aa20.78■□□□□ 0.92
PDLIM2-217ENST00000491330 FOXN1O15353 648 aa20.77■□□□□ 0.92
PDLIM2-217ENST00000491330 NBPF7P0C2Y1 421 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-217ENST00000491330 SUCLG2Q96I99 432 aa20.77■□□□□ 0.92
PDLIM2-217ENST00000491330 UTYO14607 1347 aa20.77■□□□□ 0.91
PDLIM2-217ENST00000491330 ADM5C9JUS6 153 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 FRAT2O75474 233 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 EGFRP00533 1210 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 CAVIN4Q5BKX8 364 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 EPHA10Q5JZY3 1008 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 RGMBQ6NW40 437 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 TXNRD3Q86VQ6 643 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 TRMT2AQ8IZ69 625 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 CDCA7LQ96GN5 454 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 ZNF594Q96JF6 807 aaPredicted RBP20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 COL4A1P02462 1669 aa20.76■□□□□ 0.91
PDLIM2-217ENST00000491330 DLGAP5Q15398 846 aa20.75■□□□□ 0.91
PDLIM2-217ENST00000491330 APOBEC3FQ8IUX4 373 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-217ENST00000491330 KIAA0825Q8IV33 1275 aa20.75■□□□□ 0.91
PDLIM2-217ENST00000491330 CDCA5Q96FF9 252 aa20.75■□□□□ 0.91
PDLIM2-217ENST00000491330 BICC1Q9H694 974 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-217ENST00000491330 WTIPA6NIX2 430 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 UBTFL1P0CB47 393 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 HIBADHP31937 336 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 ZNF157P51786 506 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 FKBP1AP62942 108 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 TTLL12Q14166 644 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 METTL24Q5JXM2 366 aa20.74■□□□□ 0.91
PDLIM2-217ENST00000491330 SASH1O94885 1247 aa20.73■□□□□ 0.91
PDLIM2-217ENST00000491330 IL1R1P14778 569 aa20.73■□□□□ 0.91
PDLIM2-217ENST00000491330 BRPF1P55201 1214 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-217ENST00000491330 RABL6Q3YEC7 729 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-217ENST00000491330 REM2Q8IYK8 340 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-217ENST00000491330 MIER1Q8N108 512 aa20.73■□□□□ 0.91
PDLIM2-217ENST00000491330 KIF16BQ96L93 1317 aa20.73■□□□□ 0.91
PDLIM2-217ENST00000491330 WNT10BO00744 389 aa20.72■□□□□ 0.91
PDLIM2-217ENST00000491330 LBX1P52954 281 aa20.72■□□□□ 0.91
PDLIM2-217ENST00000491330 KLRK1P26718 216 aa20.71■□□□□ 0.91
PDLIM2-217ENST00000491330 RBM5P52756 815 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM2-217ENST00000491330 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
PDLIM2-217ENST00000491330 MXD3Q9BW11 206 aa20.71■□□□□ 0.91
PDLIM2-217ENST00000491330 USP44Q9H0E7 712 aa20.71■□□□□ 0.91
PDLIM2-217ENST00000491330 NOB1Q9ULX3 412 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-217ENST00000491330 AOC2O75106 756 aa20.7■□□□□ 0.9
PDLIM2-217ENST00000491330 IFIT1P09914 478 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-217ENST00000491330 ARMC9Q7Z3E5 817 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms