RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 HUNKP57058 714 aa20.05■□□□□ 0.8
SMPD4-220ENST00000491319 ZNF280AP59817 542 aaPredicted RBP20.05■□□□□ 0.8
SMPD4-220ENST00000491319 PODNQ7Z5L7 613 aa20.05■□□□□ 0.8
SMPD4-220ENST00000491319 GMLQ99445 158 aa20.05■□□□□ 0.8
SMPD4-220ENST00000491319 BEGAINQ9BUH8 593 aa20.05■□□□□ 0.8
SMPD4-220ENST00000491319 USP17L3A6NCW0 530 aa20.04■□□□□ 0.8
SMPD4-220ENST00000491319 USP17L4A6NCW7 530 aa20.04■□□□□ 0.8
SMPD4-220ENST00000491319 USP17L1Q7RTZ2 530 aa20.04■□□□□ 0.8
SMPD4-220ENST00000491319 TSKSQ9UJT2 592 aa20.04■□□□□ 0.8
SMPD4-220ENST00000491319 TXNRD3Q86VQ6 643 aa20.03■□□□□ 0.8
SMPD4-220ENST00000491319 SULF1Q8IWU6 871 aa20.03■□□□□ 0.8
SMPD4-220ENST00000491319 GBA2Q9HCG7 927 aaPredicted RBP20.03■□□□□ 0.8
SMPD4-220ENST00000491319 ECM29Q5VYK3 1845 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 CSF1RP07333 972 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 USP17L8P0C7I0 530 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 KLRK1P26718 216 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 SCARF1Q14162 830 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 ANGEL2Q5VTE6 544 aaKnown RBP20.02■□□□□ 0.8
SMPD4-220ENST00000491319 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 MXD3Q9BW11 206 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 MYOZ2Q9NPC6 264 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 PAPPA2Q9BXP8 1791 aa20.02■□□□□ 0.8
SMPD4-220ENST00000491319 BRPF1P55201 1214 aaPredicted RBP20.01■□□□□ 0.79
SMPD4-220ENST00000491319 BEND3Q5T5X7 828 aa20.01■□□□□ 0.79
SMPD4-220ENST00000491319 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
SMPD4-220ENST00000491319 ZIC5Q96T25 663 aa20.01■□□□□ 0.79
SMPD4-220ENST00000491319 LEMD3Q9Y2U8 911 aa20.01■□□□□ 0.79
SMPD4-220ENST00000491319 ZNF804BA4D1E1 1349 aa20.01■□□□□ 0.79
SMPD4-220ENST00000491319 DACT2Q5SW24 774 aa20■□□□□ 0.79
SMPD4-220ENST00000491319 C2orf69Q8N8R5 385 aa20■□□□□ 0.79
SMPD4-220ENST00000491319 CDCA5Q96FF9 252 aa20■□□□□ 0.79
SMPD4-220ENST00000491319 COA1Q9GZY4 146 aa20■□□□□ 0.79
SMPD4-220ENST00000491319 ANKRD18BA2A2Z9 1011 aa19.99■□□□□ 0.79
SMPD4-220ENST00000491319 FOXO4P98177 505 aa19.99■□□□□ 0.79
SMPD4-220ENST00000491319 CHRNDQ07001 517 aa19.99■□□□□ 0.79
SMPD4-220ENST00000491319 NOGQ13253 232 aa19.99■□□□□ 0.79
SMPD4-220ENST00000491319 RGMBQ6NW40 437 aa19.99■□□□□ 0.79
SMPD4-220ENST00000491319 ANKRD2Q9GZV1 360 aa19.99■□□□□ 0.79
SMPD4-220ENST00000491319 FAM155AB1AL88 458 aaPredicted RBP19.98■□□□□ 0.79
SMPD4-220ENST00000491319 SCAF8Q9UPN6 1271 aaKnown RBP19.98■□□□□ 0.79
SMPD4-220ENST00000491319 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
SMPD4-220ENST00000491319 STRIP1Q5VSL9 837 aa19.97■□□□□ 0.79
SMPD4-220ENST00000491319 MYO3BQ8WXR4 1341 aa19.97■□□□□ 0.79
SMPD4-220ENST00000491319 ZNF521Q96K83 1311 aa19.97■□□□□ 0.79
SMPD4-220ENST00000491319 PITPNM2Q9BZ72 1349 aa19.97■□□□□ 0.79
SMPD4-220ENST00000491319 SNAP23O00161 211 aa19.96■□□□□ 0.79
SMPD4-220ENST00000491319 CA12O43570 354 aa19.96■□□□□ 0.79
SMPD4-220ENST00000491319 KCNJ4P48050 445 aa19.96■□□□□ 0.79
SMPD4-220ENST00000491319 IFIT5Q13325 482 aaKnown RBP19.96■□□□□ 0.79
SMPD4-220ENST00000491319 NBPF9Q3BBW0 867 aa19.96■□□□□ 0.79
SMPD4-220ENST00000491319 EPHA10Q5JZY3 1008 aa19.96■□□□□ 0.79
SMPD4-220ENST00000491319 GRM8O00222 908 aa19.95■□□□□ 0.78
SMPD4-220ENST00000491319 TAF5LO75529 589 aa19.95■□□□□ 0.78
SMPD4-220ENST00000491319 ZNF157P51786 506 aaPredicted RBP19.95■□□□□ 0.78
SMPD4-220ENST00000491319 HELBQ8NG08 1087 aaPredicted RBP19.95■□□□□ 0.78
SMPD4-220ENST00000491319 ARAP2Q8WZ64 1704 aa19.95■□□□□ 0.78
SMPD4-220ENST00000491319 IRS2Q9Y4H2 1338 aa19.95■□□□□ 0.78
SMPD4-220ENST00000491319 TTLL5Q6EMB2 1281 aa19.94■□□□□ 0.78
SMPD4-220ENST00000491319 SLC4A10Q6U841 1118 aa19.94■□□□□ 0.78
SMPD4-220ENST00000491319 LMBR1LQ6UX01 489 aa19.94■□□□□ 0.78
SMPD4-220ENST00000491319 OGFOD1Q8N543 542 aa19.94■□□□□ 0.78
SMPD4-220ENST00000491319 ABHD8Q96I13 439 aa19.94■□□□□ 0.78
SMPD4-220ENST00000491319 WNT10BO00744 389 aa19.93■□□□□ 0.78
SMPD4-220ENST00000491319 SASH1O94885 1247 aa19.93■□□□□ 0.78
SMPD4-220ENST00000491319 SLC10A3P09131 477 aa19.93■□□□□ 0.78
SMPD4-220ENST00000491319 GTF2IP78347 998 aa19.93■□□□□ 0.78
SMPD4-220ENST00000491319 KIAA0825Q8IV33 1275 aa19.93■□□□□ 0.78
SMPD4-220ENST00000491319 CCDC102AQ96A19 550 aa19.93■□□□□ 0.78
SMPD4-220ENST00000491319 ZNF594Q96JF6 807 aaPredicted RBP19.93■□□□□ 0.78
SMPD4-220ENST00000491319 CD209Q9NNX6 404 aa19.92■□□□□ 0.78
SMPD4-220ENST00000491319 C9orf78Q9NZ63 289 aaPredicted RBP19.92■□□□□ 0.78
SMPD4-220ENST00000491319 ALDH1L1O75891 902 aa19.91■□□□□ 0.78
SMPD4-220ENST00000491319 KIF23Q02241 960 aaPredicted RBP19.91■□□□□ 0.78
SMPD4-220ENST00000491319 PRAMEF18Q5VWM3 479 aa19.91■□□□□ 0.78
SMPD4-220ENST00000491319 SRCIN1Q9C0H9 1055 aa19.91■□□□□ 0.78
SMPD4-220ENST00000491319 CCDC57Q2TAC2 916 aa19.9■□□□□ 0.78
SMPD4-220ENST00000491319 TAF7LQ5H9L4 462 aa19.9■□□□□ 0.78
SMPD4-220ENST00000491319 C15orf52Q6ZUT6 534 aaKnown RBP19.9■□□□□ 0.78
SMPD4-220ENST00000491319 MOB2Q70IA6 237 aa19.9■□□□□ 0.78
SMPD4-220ENST00000491319 RASAL3Q86YV0 1011 aa19.9■□□□□ 0.78
SMPD4-220ENST00000491319 FKBP1BP68106 108 aa19.89■□□□□ 0.77
SMPD4-220ENST00000491319 CERS5Q8N5B7 392 aa19.89■□□□□ 0.77
SMPD4-220ENST00000491319 SUCLG2Q96I99 432 aa19.89■□□□□ 0.77
SMPD4-220ENST00000491319 HDAC9Q9UKV0 1011 aa19.89■□□□□ 0.77
SMPD4-220ENST00000491319 PLIN1O60240 522 aa19.88■□□□□ 0.77
SMPD4-220ENST00000491319 LDHAL6AQ6ZMR3 332 aa19.88■□□□□ 0.77
SMPD4-220ENST00000491319 ZNF804AQ7Z570 1209 aa19.88■□□□□ 0.77
SMPD4-220ENST00000491319 KAZALD1Q96I82 304 aa19.88■□□□□ 0.77
SMPD4-220ENST00000491319 ZBED3Q96IU2 234 aaPredicted RBP19.88■□□□□ 0.77
SMPD4-220ENST00000491319 CNNM1Q9NRU3 951 aa19.88■□□□□ 0.77
SMPD4-220ENST00000491319 MYH13Q9UKX3 1938 aa19.88■□□□□ 0.77
SMPD4-220ENST00000491319 NBPF7P0C2Y1 421 aaPredicted RBP19.87■□□□□ 0.77
SMPD4-220ENST00000491319 MMP14P50281 582 aa19.87■□□□□ 0.77
SMPD4-220ENST00000491319 UBE2Q2LH0YL09 131 aa19.86■□□□□ 0.77
SMPD4-220ENST00000491319 IL1R1P14778 569 aa19.86■□□□□ 0.77
SMPD4-220ENST00000491319 APOBEC3FQ8IUX4 373 aaKnown RBP19.86■□□□□ 0.77
SMPD4-220ENST00000491319 MRPL50Q8N5N7 158 aaKnown RBP19.86■□□□□ 0.77
SMPD4-220ENST00000491319 CSRNP1Q96S65 589 aa19.86■□□□□ 0.77
SMPD4-220ENST00000491319 MCOLN1Q9GZU1 580 aa19.86■□□□□ 0.77
SMPD4-220ENST00000491319 SAGE1Q9NXZ1 904 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms