RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 GGNBP2Q9H3C7 697 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 ZFP64Q9NPA5 681 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 SEC31BQ9NQW1 1179 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 CNTN3Q9P232 1028 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 BRPF3Q9ULD4 1205 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 POLIQ9UNA4 740 aa3.29□□□□□ -1.88
SNRNP40-207ENST00000491106 DDX3YO15523 660 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 DHX15O43143 795 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 GAS2O43903 313 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 DEAF1O75398 565 aaPredicted RBP3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 PDGFAP04085 211 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 NEFLP07196 543 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 H2AFB1P0C5Y9 115 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 H2AFB2P0C5Z0 115 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 SSTR4P31391 388 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 USP11P51784 963 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 EHHADHQ08426 723 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 PDE4CQ08493 712 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 SETDB1Q15047 1291 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 GRIK5Q16478 980 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 NKAPLQ5M9Q1 402 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 FDX2Q6P4F2 183 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 ERICH6Q7L0X2 663 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 UTP4Q969X6 686 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 KLHDC7BQ96G42 594 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 POP1Q99575 1024 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 OSMRQ99650 979 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 USP26Q9BXU7 913 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 SRA1Q9HD15 236 aaKnown RBP3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 RAD18Q9NS91 495 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 PCMTD2Q9NV79 361 aa3.28□□□□□ -1.88
SNRNP40-207ENST00000491106 DLL1O00548 723 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 POLR3DP05423 398 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 EDN3P14138 238 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 SSFA2P28290 1259 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 GSTM4Q03013 218 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 ZNF211Q13398 564 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 IKBKEQ14164 716 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 XP32Q5T750 250 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 NUTM2GQ5VZR2 741 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 GLYCTKQ8IVS8 523 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 KLHL23Q8NBE8 558 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 GIMAP7Q8NHV1 300 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 MEGF10Q96KG7 1140 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 PPP4R2Q9NY27 417 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 BIN2Q9UBW5 565 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 RAXQ9Y2V3 346 aa3.27□□□□□ -1.89
SNRNP40-207ENST00000491106 F8W735 103 aaPredicted RBP3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 EREGO14944 169 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 C19orf57Q0VDD7 668 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 SF3B2Q13435 895 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 NFKBIBQ15653 356 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 PRR23CQ6ZRP0 262 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 TMEM130Q8N3G9 435 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 CEP120Q8N960 986 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 GALNT11Q8NCW6 608 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 DDX54Q8TDD1 881 aaKnown RBP3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 RUSC1Q9BVN2 902 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 ATG3Q9NT62 314 aa3.26□□□□□ -1.89
SNRNP40-207ENST00000491106 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 H3BRB1 525 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 H3BRJ5 948 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 NDUFB5O43674 189 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 GADD45BO75293 160 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 TNFRSF21O75509 655 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 BMP3P12645 472 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 ACPPP15309 386 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 FSTP19883 344 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 EPHA1P21709 976 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 GRIK1P39086 918 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 PIP4K2BP78356 416 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 FBXL6Q8N531 539 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 SNX29Q8TEQ0 813 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 BSNDQ8WZ55 320 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 EHD4Q9H223 541 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 TUT1Q9H6E5 874 aaKnown RBP3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 CYP4F12Q9HCS2 524 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 CCDC87Q9NVE4 849 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 DZANK1Q9NVP4 752 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 KCNK4Q9NYG8 393 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 SLAIN2Q9P270 581 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 SALL4Q9UJQ4 1053 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 FOXD3Q9UJU5 478 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 AMOTL2Q9Y2J4 779 aa3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.25□□□□□ -1.89
SNRNP40-207ENST00000491106 HMX2A2RU54 273 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 GSC2O15499 205 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 HYAL3O43820 417 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 ARTNQ5T4W7 220 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 XKR5Q6UX68 686 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 BEND4Q6ZU67 534 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 TRIM42Q8IWZ5 723 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 CCER1Q8TC90 406 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 UBASH3BQ8TF42 649 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 HHIPQ96QV1 700 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 UBL7Q96S82 380 aaPredicted RBP3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 ZKSCAN3Q9BRR0 538 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 RNF208Q9H0X6 261 aa3.24□□□□□ -1.89
SNRNP40-207ENST00000491106 TMEM88BA6NKF7 163 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms