RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 PDE4AP27815 886 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 C16orf71Q8IYS4 520 aaPredicted RBP22.84■■□□□ 1.25
MCF2L-230ENST00000491028 XAGE2Q96GT9 111 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 PSMD1Q99460 953 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 EYA3Q99504 573 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 DBNDD2Q9BQY9 259 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 BCL11AQ9H165 835 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 POLLQ9UGP5 575 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 WWC3Q9ULE0 1092 aa22.84■■□□□ 1.25
MCF2L-230ENST00000491028 IRS2Q9Y4H2 1338 aa22.83■■□□□ 1.25
MCF2L-230ENST00000491028 C6orf229H3BNL8 230 aa22.83■■□□□ 1.25
MCF2L-230ENST00000491028 SNAP23O00161 211 aa22.83■■□□□ 1.25
MCF2L-230ENST00000491028 MX1P20591 662 aa22.83■■□□□ 1.25
MCF2L-230ENST00000491028 TLR7Q9NYK1 1049 aaKnown RBP22.83■■□□□ 1.25
MCF2L-230ENST00000491028 AOX1Q06278 1338 aa22.82■■□□□ 1.24
MCF2L-230ENST00000491028 TTC41PQ6P2S7 1318 aa22.82■■□□□ 1.24
MCF2L-230ENST00000491028 ADORA1P30542 326 aa22.82■■□□□ 1.24
MCF2L-230ENST00000491028 GORABQ5T7V8 394 aa22.82■■□□□ 1.24
MCF2L-230ENST00000491028 STAP2Q9UGK3 403 aa22.82■■□□□ 1.24
MCF2L-230ENST00000491028 FKBP4Q02790 459 aaKnown RBP eCLIP22.81■■□□□ 1.242e-6■□□□□ 10.6
MCF2L-230ENST00000491028 CAVIN4Q5BKX8 364 aa22.81■■□□□ 1.24
MCF2L-230ENST00000491028 CCDC158Q5M9N0 1113 aa22.81■■□□□ 1.24
MCF2L-230ENST00000491028 OTUD7AQ8TE49 926 aaPredicted RBP22.81■■□□□ 1.24
MCF2L-230ENST00000491028 OSBPL3Q9H4L5 887 aa22.81■■□□□ 1.24
MCF2L-230ENST00000491028 ECHDC1Q9NTX5 307 aa22.81■■□□□ 1.24
MCF2L-230ENST00000491028 LTBP3Q9NS15 1303 aa22.81■■□□□ 1.24
MCF2L-230ENST00000491028 WTIPA6NIX2 430 aaPredicted RBP22.8■■□□□ 1.24
MCF2L-230ENST00000491028 PLEKHM2Q8IWE5 1019 aa22.8■■□□□ 1.24
MCF2L-230ENST00000491028 VPS33BQ9H267 617 aa22.8■■□□□ 1.24
MCF2L-230ENST00000491028 ZBTB22O15209 634 aa22.79■■□□□ 1.24
MCF2L-230ENST00000491028 PDE1AP54750 535 aa22.79■■□□□ 1.24
MCF2L-230ENST00000491028 WASHC4Q2M389 1173 aa22.79■■□□□ 1.24
MCF2L-230ENST00000491028 ZNF804AQ7Z570 1209 aa22.79■■□□□ 1.24
MCF2L-230ENST00000491028 ZC3H12CQ9C0D7 883 aaKnown RBP22.79■■□□□ 1.24
MCF2L-230ENST00000491028 MYH13Q9UKX3 1938 aa22.78■■□□□ 1.24
MCF2L-230ENST00000491028 ERC2O15083 957 aa22.78■■□□□ 1.24
MCF2L-230ENST00000491028 KLRK1P26718 216 aa22.78■■□□□ 1.24
MCF2L-230ENST00000491028 TTC39AQ5SRH9 613 aa22.78■■□□□ 1.24
MCF2L-230ENST00000491028 CCDC102BQ68D86 513 aa22.78■■□□□ 1.24
MCF2L-230ENST00000491028 ZNF512BQ96KM6 892 aaPredicted RBP22.78■■□□□ 1.24
MCF2L-230ENST00000491028 FAM84BQ96KN1 310 aaPredicted RBP22.78■■□□□ 1.24
MCF2L-230ENST00000491028 TAOK3Q9H2K8 898 aa22.78■■□□□ 1.24
MCF2L-230ENST00000491028 UQCRFS1P1P0C7P4 283 aa22.77■■□□□ 1.24
MCF2L-230ENST00000491028 ATP5JP18859 108 aa22.77■■□□□ 1.24
MCF2L-230ENST00000491028 ARID4AP29374 1257 aaPredicted RBP22.77■■□□□ 1.24
MCF2L-230ENST00000491028 HIBADHP31937 336 aaKnown RBP22.77■■□□□ 1.24
MCF2L-230ENST00000491028 GYG1P46976 350 aa22.77■■□□□ 1.24
MCF2L-230ENST00000491028 FBXO33Q7Z6M2 555 aa22.77■■□□□ 1.24
MCF2L-230ENST00000491028 TXNRD3Q86VQ6 643 aa22.77■■□□□ 1.24
MCF2L-230ENST00000491028 VPS37DQ86XT2 251 aa22.77■■□□□ 1.24
MCF2L-230ENST00000491028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.77■■□□□ 1.24
MCF2L-230ENST00000491028 GPR101Q96P66 508 aaPredicted RBP22.77■■□□□ 1.24
MCF2L-230ENST00000491028 GNL3LQ9NVN8 582 aaKnown RBP22.77■■□□□ 1.24
MCF2L-230ENST00000491028 NFKBIEO00221 500 aa22.76■■□□□ 1.23
MCF2L-230ENST00000491028 GLRX3O76003 335 aaKnown RBP22.76■■□□□ 1.23
MCF2L-230ENST00000491028 PHKA1P46020 1223 aa22.76■■□□□ 1.23
MCF2L-230ENST00000491028 RGS3P49796 1198 aa22.76■■□□□ 1.23
MCF2L-230ENST00000491028 KIAA2012Q0VF49 1180 aa22.76■■□□□ 1.23
MCF2L-230ENST00000491028 SEMA3EO15041 775 aa22.75■■□□□ 1.23
MCF2L-230ENST00000491028 BCAMP50895 628 aa22.75■■□□□ 1.23
MCF2L-230ENST00000491028 SKAP1Q86WV1 359 aa22.75■■□□□ 1.23
MCF2L-230ENST00000491028 PI4K2BQ8TCG2 481 aa22.75■■□□□ 1.23
MCF2L-230ENST00000491028 COA1Q9GZY4 146 aa22.75■■□□□ 1.23
MCF2L-230ENST00000491028 AKAP11Q9UKA4 1901 aa22.74■■□□□ 1.23
MCF2L-230ENST00000491028 RIMBP2O15034 1052 aa22.73■■□□□ 1.23
MCF2L-230ENST00000491028 PPIP5K2O43314 1243 aa22.73■■□□□ 1.23
MCF2L-230ENST00000491028 YBX3P16989 372 aaKnown RBP eCLIP22.73■■□□□ 1.23
MCF2L-230ENST00000491028 TSHZ3Q63HK5 1081 aa22.73■■□□□ 1.23
MCF2L-230ENST00000491028 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
MCF2L-230ENST00000491028 IL1R1P14778 569 aa22.72■■□□□ 1.23
MCF2L-230ENST00000491028 IARSP41252 1262 aaKnown RBP22.72■■□□□ 1.23
MCF2L-230ENST00000491028 AOC3Q16853 763 aa22.72■■□□□ 1.23
MCF2L-230ENST00000491028 CD209Q9NNX6 404 aa22.72■■□□□ 1.23
MCF2L-230ENST00000491028 ZNF277Q9NRM2 450 aaPredicted RBP22.72■■□□□ 1.23
MCF2L-230ENST00000491028 PDS5AQ29RF7 1337 aaKnown RBP22.72■■□□□ 1.23
MCF2L-230ENST00000491028 G3V3G9 751 aa22.71■■□□□ 1.23
MCF2L-230ENST00000491028 TTC22Q5TAA0 569 aa22.71■■□□□ 1.23
MCF2L-230ENST00000491028 DCAF8Q5TAQ9 597 aa22.71■■□□□ 1.23
MCF2L-230ENST00000491028 TDRD7Q8NHU6 1098 aaKnown RBP22.71■■□□□ 1.23
MCF2L-230ENST00000491028 DENND2AQ9ULE3 1009 aa22.71■■□□□ 1.23
MCF2L-230ENST00000491028 MCAMP43121 646 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 RASSF7Q02833 373 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 RASGRF1Q13972 1273 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 GPR162Q16538 588 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 ARHGAP27Q6ZUM4 889 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 PODNQ7Z5L7 613 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 LARGE2Q8N3Y3 721 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 HAUS7Q99871 368 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 BOLA2Q9H3K6 86 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 PSME4Q14997 1843 aa22.7■■□□□ 1.22
MCF2L-230ENST00000491028 DICER1Q9UPY3 1922 aaKnown RBP22.7■■□□□ 1.22
MCF2L-230ENST00000491028 SBF1O95248 1867 aa22.69■■□□□ 1.22
MCF2L-230ENST00000491028 CCDC88AQ3V6T2 1871 aa22.69■■□□□ 1.22
MCF2L-230ENST00000491028 COL1A1P02452 1464 aaPredicted RBP22.69■■□□□ 1.22
MCF2L-230ENST00000491028 GRIN3BO60391 1043 aa22.69■■□□□ 1.22
MCF2L-230ENST00000491028 FRAT2O75474 233 aaPredicted RBP22.69■■□□□ 1.22
MCF2L-230ENST00000491028 AK9Q5TCS8 1911 aa22.69■■□□□ 1.22
MCF2L-230ENST00000491028 ECE2O60344 883 aa22.68■■□□□ 1.22
MCF2L-230ENST00000491028 SCARF1Q14162 830 aa22.68■■□□□ 1.22
MCF2L-230ENST00000491028 SPATA5Q8NB90 893 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms