RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 ADARB2Q9NS39 739 aaKnown RBP21.24■□□□□ 0.99
RAPGEF3-212ENST00000490387 BSDC1Q9NW68 430 aaPredicted RBP21.24■□□□□ 0.99
RAPGEF3-212ENST00000490387 PCDHB15Q9Y5E8 787 aa21.24■□□□□ 0.99
RAPGEF3-212ENST00000490387 YDJCA8MPS7 323 aa21.23■□□□□ 0.99
RAPGEF3-212ENST00000490387 KLHDC4Q8TBB5 520 aa21.23■□□□□ 0.99
RAPGEF3-212ENST00000490387 DBNDD1Q9H9R9 158 aa21.23■□□□□ 0.99
RAPGEF3-212ENST00000490387 COPRSQ9NQ92 184 aa21.23■□□□□ 0.99
RAPGEF3-212ENST00000490387 ANKIB1Q9P2G1 1089 aa21.23■□□□□ 0.99
RAPGEF3-212ENST00000490387 MKRN1Q9UHC7 482 aaKnown RBP21.23■□□□□ 0.99
RAPGEF3-212ENST00000490387 TMEM88BA6NKF7 163 aa21.22■□□□□ 0.99
RAPGEF3-212ENST00000490387 IGHMBP2P38935 993 aaKnown RBP21.22■□□□□ 0.99
RAPGEF3-212ENST00000490387 TBC1D16Q8TBP0 767 aa21.22■□□□□ 0.99
RAPGEF3-212ENST00000490387 UFL1O94874 794 aa21.21■□□□□ 0.99
RAPGEF3-212ENST00000490387 GPR101Q96P66 508 aaPredicted RBP21.21■□□□□ 0.99
RAPGEF3-212ENST00000490387 PODXL2Q9NZ53 605 aa21.21■□□□□ 0.99
RAPGEF3-212ENST00000490387 GGA1Q9UJY5 639 aa21.21■□□□□ 0.99
RAPGEF3-212ENST00000490387 PA2G4Q9UQ80 394 aaKnown RBP21.21■□□□□ 0.99
RAPGEF3-212ENST00000490387 DOK7Q18PE1 504 aa21.2■□□□□ 0.98
RAPGEF3-212ENST00000490387 PUS3Q9BZE2 481 aaKnown RBP21.2■□□□□ 0.98
RAPGEF3-212ENST00000490387 ZC3H12CQ9C0D7 883 aaKnown RBP21.2■□□□□ 0.98
RAPGEF3-212ENST00000490387 FBXO3Q9UK99 471 aa21.2■□□□□ 0.98
RAPGEF3-212ENST00000490387 RIPOR2Q9Y4F9 1068 aa21.2■□□□□ 0.98
RAPGEF3-212ENST00000490387 G3V3G9 751 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 ECE2O60344 883 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 TAF7LQ5H9L4 462 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 DCAF8Q5TAQ9 597 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 LDHAL6AQ6ZMR3 332 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 ATG9AQ7Z3C6 839 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 MPHOSPH8Q99549 860 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 MINPP1Q9UNW1 487 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 TRPM7Q96QT4 1865 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 CNTNAP1P78357 1384 aa21.19■□□□□ 0.98
RAPGEF3-212ENST00000490387 EYA2O00167 538 aa21.18■□□□□ 0.98
RAPGEF3-212ENST00000490387 PSMD14O00487 310 aa21.18■□□□□ 0.98
RAPGEF3-212ENST00000490387 CIAO1O76071 339 aa21.18■□□□□ 0.98
RAPGEF3-212ENST00000490387 LRRC24Q50LG9 513 aa21.18■□□□□ 0.98
RAPGEF3-212ENST00000490387 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
RAPGEF3-212ENST00000490387 XDHP47989 1333 aa21.18■□□□□ 0.98
RAPGEF3-212ENST00000490387 PCNTO95613 3336 aa21.17■□□□□ 0.98
RAPGEF3-212ENST00000490387 HMMRO75330 724 aa21.17■□□□□ 0.98
RAPGEF3-212ENST00000490387 CNOT7Q9UIV1 285 aaKnown RBP21.17■□□□□ 0.98
RAPGEF3-212ENST00000490387 ZBTB12Q9Y330 459 aaPredicted RBP21.17■□□□□ 0.98
RAPGEF3-212ENST00000490387 SCN9AQ15858 1988 aa21.17■□□□□ 0.98
RAPGEF3-212ENST00000490387 H7C1D1 291 aa21.16■□□□□ 0.98
RAPGEF3-212ENST00000490387 MICALL2Q8IY33 904 aa21.16■□□□□ 0.98
RAPGEF3-212ENST00000490387 SIL1Q9H173 461 aa21.16■□□□□ 0.98
RAPGEF3-212ENST00000490387 CNNM1Q9NRU3 951 aa21.16■□□□□ 0.98
RAPGEF3-212ENST00000490387 HSPA1AP0DMV8 641 aaKnown RBP21.15■□□□□ 0.98
RAPGEF3-212ENST00000490387 HSPA1BP0DMV9 641 aaKnown RBP21.15■□□□□ 0.98
RAPGEF3-212ENST00000490387 ATP2B4P23634 1241 aa21.15■□□□□ 0.98
RAPGEF3-212ENST00000490387 CHRNDQ07001 517 aa21.15■□□□□ 0.98
RAPGEF3-212ENST00000490387 VGLL2Q8N8G2 317 aa21.15■□□□□ 0.98
RAPGEF3-212ENST00000490387 ABT1Q9ULW3 272 aaKnown RBP21.15■□□□□ 0.98
RAPGEF3-212ENST00000490387 MROH5Q6ZUA9 1318 aa21.14■□□□□ 0.97
RAPGEF3-212ENST00000490387 SHTN1A0MZ66 631 aa21.14■□□□□ 0.97
RAPGEF3-212ENST00000490387 RPS12P25398 132 aaKnown RBP21.14■□□□□ 0.97
RAPGEF3-212ENST00000490387 HDAC1Q13547 482 aaPredicted RBP21.14■□□□□ 0.97
RAPGEF3-212ENST00000490387 TRPM4Q8TD43 1214 aa21.14■□□□□ 0.97
RAPGEF3-212ENST00000490387 DPF2Q92785 391 aa21.14■□□□□ 0.97
RAPGEF3-212ENST00000490387 KCNQ5Q9NR82 932 aa21.14■□□□□ 0.97
RAPGEF3-212ENST00000490387 PSME4Q14997 1843 aa21.13■□□□□ 0.97
RAPGEF3-212ENST00000490387 TRAF5O00463 557 aa21.13■□□□□ 0.97
RAPGEF3-212ENST00000490387 NEFLP07196 543 aa21.13■□□□□ 0.97
RAPGEF3-212ENST00000490387 IL15P40933 162 aaPredicted RBP21.13■□□□□ 0.97
RAPGEF3-212ENST00000490387 FMR1Q06787 632 aaKnown RBP eCLIP21.13■□□□□ 0.97
RAPGEF3-212ENST00000490387 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
RAPGEF3-212ENST00000490387 HIRAP54198 1017 aaPredicted RBP21.12■□□□□ 0.97
RAPGEF3-212ENST00000490387 ZC3H15Q8WU90 426 aaKnown RBP21.12■□□□□ 0.97
RAPGEF3-212ENST00000490387 ANKRD2Q9GZV1 360 aa21.12■□□□□ 0.97
RAPGEF3-212ENST00000490387 DEFB115Q30KQ5 88 aa21.11■□□□□ 0.97
RAPGEF3-212ENST00000490387 IFFO2Q5TF58 517 aa21.11■□□□□ 0.97
RAPGEF3-212ENST00000490387 HELBQ8NG08 1087 aaPredicted RBP21.11■□□□□ 0.97
RAPGEF3-212ENST00000490387 DCTPP1Q9H773 170 aa21.11■□□□□ 0.97
RAPGEF3-212ENST00000490387 EXOC6BQ9Y2D4 811 aa21.11■□□□□ 0.97
RAPGEF3-212ENST00000490387 WTIPA6NIX2 430 aaPredicted RBP21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 RASSF10A6NK89 507 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 TAF5LO75529 589 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 SASH1O94885 1247 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 VIL1P09327 827 aaKnown RBP21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 VEGFBP49765 207 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 G3BP1Q13283 466 aaKnown RBP eCLIP21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 METTL24Q5JXM2 366 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 SAMD7Q7Z3H4 446 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 GLIS2Q9BZE0 524 aaPredicted RBP21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 PGAP2Q9UHJ9 254 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 MED23Q9ULK4 1368 aa21.1■□□□□ 0.97
RAPGEF3-212ENST00000490387 ARAP2Q8WZ64 1704 aa21.09■□□□□ 0.97
RAPGEF3-212ENST00000490387 IRS2Q9Y4H2 1338 aa21.09■□□□□ 0.97
RAPGEF3-212ENST00000490387 PDE8BO95263 885 aa21.09■□□□□ 0.97
RAPGEF3-212ENST00000490387 TBC1D10BQ4KMP7 808 aaPredicted RBP21.09■□□□□ 0.97
RAPGEF3-212ENST00000490387 LEMD3Q9Y2U8 911 aa21.09■□□□□ 0.97
RAPGEF3-212ENST00000490387 POLR2AP24928 1970 aaKnown RBP21.08■□□□□ 0.97
RAPGEF3-212ENST00000490387 FGFR2P21802 821 aa21.08■□□□□ 0.97
RAPGEF3-212ENST00000490387 HSP90AB4PQ58FF6 505 aa21.08■□□□□ 0.97
RAPGEF3-212ENST00000490387 RBM26Q5T8P6 1007 aaKnown RBP21.08■□□□□ 0.97
RAPGEF3-212ENST00000490387 CEP126Q9P2H0 1117 aa21.08■□□□□ 0.97
RAPGEF3-212ENST00000490387 ZNF804BA4D1E1 1349 aa21.07■□□□□ 0.96
RAPGEF3-212ENST00000490387 SNAP23O00161 211 aa21.07■□□□□ 0.96
RAPGEF3-212ENST00000490387 CELF2O95319 508 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms