RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 ZNF853P0CG23 659 aa25.43■■□□□ 1.66
UPK3B-205ENST00000490360 NBPF9Q3BBW0 867 aa25.43■■□□□ 1.66
UPK3B-205ENST00000490360 STRIP1Q5VSL9 837 aa25.43■■□□□ 1.66
UPK3B-205ENST00000490360 BSDC1Q9NW68 430 aaPredicted RBP25.43■■□□□ 1.66
UPK3B-205ENST00000490360 WNT10BO00744 389 aa25.42■■□□□ 1.66
UPK3B-205ENST00000490360 DACT2Q5SW24 774 aa25.42■■□□□ 1.66
UPK3B-205ENST00000490360 ARMC9Q7Z3E5 817 aa25.42■■□□□ 1.66
UPK3B-205ENST00000490360 GCC1Q96CN9 775 aa25.42■■□□□ 1.66
UPK3B-205ENST00000490360 CCDC85AQ96PX6 553 aaPredicted RBP25.42■■□□□ 1.66
UPK3B-205ENST00000490360 COA1Q9GZY4 146 aa25.42■■□□□ 1.66
UPK3B-205ENST00000490360 IFT57Q9NWB7 429 aa25.42■■□□□ 1.66
UPK3B-205ENST00000490360 FKTNO75072 461 aa25.41■■□□□ 1.66
UPK3B-205ENST00000490360 ALDH1A1P00352 501 aa25.41■■□□□ 1.66
UPK3B-205ENST00000490360 CTSWP56202 376 aa25.41■■□□□ 1.66
UPK3B-205ENST00000490360 GNAI1P63096 354 aa25.41■■□□□ 1.66
UPK3B-205ENST00000490360 APOBEC3FQ8IUX4 373 aaKnown RBP25.4■■□□□ 1.66
UPK3B-205ENST00000490360 MINPP1Q9UNW1 487 aa25.4■■□□□ 1.66
UPK3B-205ENST00000490360 ADAMTS8Q9UP79 889 aa25.4■■□□□ 1.66
UPK3B-205ENST00000490360 MYH3P11055 1940 aa25.39■■□□□ 1.66
UPK3B-205ENST00000490360 INHBEP58166 350 aa25.39■■□□□ 1.66
UPK3B-205ENST00000490360 PRAMEF18Q5VWM3 479 aa25.39■■□□□ 1.66
UPK3B-205ENST00000490360 LEMD3Q9Y2U8 911 aa25.39■■□□□ 1.66
UPK3B-205ENST00000490360 CCT4P50991 539 aaKnown RBP25.38■■□□□ 1.65
UPK3B-205ENST00000490360 CCDC30Q5VVM6 783 aa25.38■■□□□ 1.65
UPK3B-205ENST00000490360 TTLL11Q8NHH1 800 aa25.38■■□□□ 1.65
UPK3B-205ENST00000490360 SCAF8Q9UPN6 1271 aaKnown RBP25.38■■□□□ 1.65
UPK3B-205ENST00000490360 PTPN12Q05209 780 aaKnown RBP25.36■■□□□ 1.65
UPK3B-205ENST00000490360 NEXNQ0ZGT2 675 aa25.36■■□□□ 1.65
UPK3B-205ENST00000490360 LDLRAD1Q5T700 205 aa25.36■■□□□ 1.65
UPK3B-205ENST00000490360 JARID2Q92833 1246 aaPredicted RBP25.36■■□□□ 1.65
UPK3B-205ENST00000490360 COL1A1P02452 1464 aaPredicted RBP25.35■■□□□ 1.65
UPK3B-205ENST00000490360 ELL2O00472 640 aaPredicted RBP25.35■■□□□ 1.65
UPK3B-205ENST00000490360 TTLL5Q6EMB2 1281 aa25.35■■□□□ 1.65
UPK3B-205ENST00000490360 FBXW7Q969H0 707 aa25.35■■□□□ 1.65
UPK3B-205ENST00000490360 MAP3K2Q9Y2U5 619 aa25.35■■□□□ 1.65
UPK3B-205ENST00000490360 ZNF646O15015 1829 aaPredicted RBP25.35■■□□□ 1.65
UPK3B-205ENST00000490360 MANSC4A6NHS7 340 aaPredicted RBP25.34■■□□□ 1.65
UPK3B-205ENST00000490360 MKRN3Q13064 507 aaKnown RBP25.34■■□□□ 1.65
UPK3B-205ENST00000490360 SPRYD7Q5W111 196 aa25.34■■□□□ 1.65
UPK3B-205ENST00000490360 INTS3Q68E01 1043 aaKnown RBP25.34■■□□□ 1.65
UPK3B-205ENST00000490360 KSR2Q6VAB6 950 aa25.34■■□□□ 1.65
UPK3B-205ENST00000490360 ANKRD2Q9GZV1 360 aa25.34■■□□□ 1.65
UPK3B-205ENST00000490360 GREM2Q9H772 168 aa25.34■■□□□ 1.65
UPK3B-205ENST00000490360 UNCXA6NJT0 531 aa25.33■■□□□ 1.65
UPK3B-205ENST00000490360 IGHMBP2P38935 993 aaKnown RBP25.33■■□□□ 1.65
UPK3B-205ENST00000490360 MXD3Q9BW11 206 aa25.33■■□□□ 1.65
UPK3B-205ENST00000490360 SPEF2Q9C093 1822 aa25.33■■□□□ 1.64
UPK3B-205ENST00000490360 SASH1O94885 1247 aa25.32■■□□□ 1.64
UPK3B-205ENST00000490360 WTIPA6NIX2 430 aaPredicted RBP25.31■■□□□ 1.64
UPK3B-205ENST00000490360 ZBTB48P10074 688 aaPredicted RBP25.31■■□□□ 1.64
UPK3B-205ENST00000490360 SLC10A4Q96EP9 437 aa25.31■■□□□ 1.64
UPK3B-205ENST00000490360 ZBED3Q96IU2 234 aaPredicted RBP25.31■■□□□ 1.64
UPK3B-205ENST00000490360 ANGEL1Q9UNK9 670 aaKnown RBP25.31■■□□□ 1.64
UPK3B-205ENST00000490360 ZNF804BA4D1E1 1349 aa25.31■■□□□ 1.64
UPK3B-205ENST00000490360 PI4KAP2A4QPH2 592 aa25.3■■□□□ 1.64
UPK3B-205ENST00000490360 IGKV5-2P06315 115 aa25.3■■□□□ 1.64
UPK3B-205ENST00000490360 PI4KAP1Q8N8J0 262 aa25.3■■□□□ 1.64
UPK3B-205ENST00000490360 C8orf58Q8NAV2 365 aa25.3■■□□□ 1.64
UPK3B-205ENST00000490360 PPP2R3BQ9Y5P8 575 aa25.3■■□□□ 1.64
UPK3B-205ENST00000490360 PPP1R12BO60237 982 aaPredicted RBP25.29■■□□□ 1.64
UPK3B-205ENST00000490360 MAP3K11Q16584 847 aa25.29■■□□□ 1.64
UPK3B-205ENST00000490360 KIAA0825Q8IV33 1275 aa25.29■■□□□ 1.64
UPK3B-205ENST00000490360 PRKG1Q13976 671 aa25.28■■□□□ 1.64
UPK3B-205ENST00000490360 TXNRD3Q86VQ6 643 aa25.28■■□□□ 1.64
UPK3B-205ENST00000490360 IFNL1Q8IU54 200 aa25.28■■□□□ 1.64
UPK3B-205ENST00000490360 MPHOSPH8Q99549 860 aa25.28■■□□□ 1.64
UPK3B-205ENST00000490360 STK31Q9BXU1 1019 aa25.28■■□□□ 1.64
UPK3B-205ENST00000490360 DEFB129Q9H1M3 183 aa25.28■■□□□ 1.64
UPK3B-205ENST00000490360 R3HDMLQ9H3Y0 253 aa25.28■■□□□ 1.64
UPK3B-205ENST00000490360 APAF1O14727 1248 aa25.27■■□□□ 1.64
UPK3B-205ENST00000490360 DLGAP5Q15398 846 aa25.27■■□□□ 1.64
UPK3B-205ENST00000490360 MTMR14Q8NCE2 650 aa25.27■■□□□ 1.64
UPK3B-205ENST00000490360 TRIM17Q9Y577 477 aa25.27■■□□□ 1.64
UPK3B-205ENST00000490360 LAMB1P07942 1786 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 NEURL1BA8MQ27 555 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 H7C1W4 665 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 KCNJ4P48050 445 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 GTF2IP78347 998 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 SUPT20HL1Q3ZLR7 823 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 OTUD7BQ6GQQ9 843 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 PLA2G12BQ9BX93 195 aa25.26■■□□□ 1.63
UPK3B-205ENST00000490360 MYO1BO43795 1136 aa25.25■■□□□ 1.63
UPK3B-205ENST00000490360 OTOP1Q7RTM1 612 aa25.25■■□□□ 1.63
UPK3B-205ENST00000490360 UBE3BQ7Z3V4 1068 aa25.25■■□□□ 1.63
UPK3B-205ENST00000490360 ERO1AQ96HE7 468 aa25.25■■□□□ 1.63
UPK3B-205ENST00000490360 HTTP42858 3142 aa25.25■■□□□ 1.63
UPK3B-205ENST00000490360 ITGA6P23229 1130 aa25.24■■□□□ 1.63
UPK3B-205ENST00000490360 ECM29Q5VYK3 1845 aa25.23■■□□□ 1.63
UPK3B-205ENST00000490360 DDX10Q13206 875 aaKnown RBP25.23■■□□□ 1.63
UPK3B-205ENST00000490360 CWF19L2Q2TBE0 894 aaKnown RBP25.23■■□□□ 1.63
UPK3B-205ENST00000490360 WNK4Q96J92 1243 aa25.23■■□□□ 1.63
UPK3B-205ENST00000490360 CD209Q9NNX6 404 aa25.23■■□□□ 1.63
UPK3B-205ENST00000490360 C15orf52Q6ZUT6 534 aaKnown RBP25.22■■□□□ 1.63
UPK3B-205ENST00000490360 RBBP6Q7Z6E9 1792 aaKnown RBP25.22■■□□□ 1.63
UPK3B-205ENST00000490360 FKBP1AP62942 108 aaKnown RBP25.21■■□□□ 1.63
UPK3B-205ENST00000490360 MYH16Q9H6N6 1097 aa25.21■■□□□ 1.63
UPK3B-205ENST00000490360 MKI67P46013 3256 aaKnown RBP25.21■■□□□ 1.63
UPK3B-205ENST00000490360 CSF1RP07333 972 aa25.2■■□□□ 1.62
UPK3B-205ENST00000490360 KLRK1P26718 216 aa25.2■■□□□ 1.62
UPK3B-205ENST00000490360 IREB2P48200 963 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms