RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 DCPSQ96C86 337 aaKnown RBP21.94■■□□□ 1.1
SEC13-218ENST00000490283 ZNF594Q96JF6 807 aaPredicted RBP21.94■■□□□ 1.1
SEC13-218ENST00000490283 BICC1Q9H694 974 aaKnown RBP21.94■■□□□ 1.1
SEC13-218ENST00000490283 MYO3BQ8WXR4 1341 aa21.94■■□□□ 1.1
SEC13-218ENST00000490283 PLIN1O60240 522 aa21.93■■□□□ 1.1
SEC13-218ENST00000490283 TAF5LO75529 589 aa21.93■■□□□ 1.1
SEC13-218ENST00000490283 STRIP1Q5VSL9 837 aa21.93■■□□□ 1.1
SEC13-218ENST00000490283 KIF16BQ96L93 1317 aa21.93■■□□□ 1.1
SEC13-218ENST00000490283 NOB1Q9ULX3 412 aaKnown RBP21.93■■□□□ 1.1
SEC13-218ENST00000490283 RASSF10A6NK89 507 aa21.92■■□□□ 1.1
SEC13-218ENST00000490283 CELF2O95319 508 aaKnown RBP21.92■■□□□ 1.1
SEC13-218ENST00000490283 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
SEC13-218ENST00000490283 PAXIP1Q6ZW49 1069 aaPredicted RBP21.92■■□□□ 1.1
SEC13-218ENST00000490283 ZNF804AQ7Z570 1209 aa21.92■■□□□ 1.1
SEC13-218ENST00000490283 TXNRD3Q86VQ6 643 aa21.92■■□□□ 1.1
SEC13-218ENST00000490283 OGFOD1Q8N543 542 aa21.92■■□□□ 1.1
SEC13-218ENST00000490283 ZNF408Q9H9D4 720 aa21.92■■□□□ 1.1
SEC13-218ENST00000490283 SCN9AQ15858 1988 aa21.91■■□□□ 1.1
SEC13-218ENST00000490283 KLRK1P26718 216 aa21.91■■□□□ 1.1
SEC13-218ENST00000490283 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
SEC13-218ENST00000490283 ZNF280AP59817 542 aaPredicted RBP21.91■■□□□ 1.1
SEC13-218ENST00000490283 FMR1Q06787 632 aaKnown RBP eCLIP21.91■■□□□ 1.1
SEC13-218ENST00000490283 RABL6Q3YEC7 729 aaPredicted RBP21.91■■□□□ 1.1
SEC13-218ENST00000490283 KRT26Q7Z3Y9 468 aa21.91■■□□□ 1.1
SEC13-218ENST00000490283 KAZALD1Q96I82 304 aa21.91■■□□□ 1.1
SEC13-218ENST00000490283 EGFRP00533 1210 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 VEGFBP49765 207 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 RARSP54136 660 aaKnown RBP21.9■■□□□ 1.1
SEC13-218ENST00000490283 DACT2Q5SW24 774 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 TTLL5Q6EMB2 1281 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 C15orf52Q6ZUT6 534 aaKnown RBP21.9■■□□□ 1.1
SEC13-218ENST00000490283 USP48Q86UV5 1035 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 SULF1Q8IWU6 871 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 GMLQ99445 158 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 USP44Q9H0E7 712 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 MYOZ2Q9NPC6 264 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 HDAC5Q9UQL6 1122 aa21.9■■□□□ 1.1
SEC13-218ENST00000490283 HSPA1AP0DMV8 641 aaKnown RBP21.89■■□□□ 1.09
SEC13-218ENST00000490283 HSPA1BP0DMV9 641 aaKnown RBP21.89■■□□□ 1.09
SEC13-218ENST00000490283 ECE1P42892 770 aa21.89■■□□□ 1.09
SEC13-218ENST00000490283 MMP14P50281 582 aa21.89■■□□□ 1.09
SEC13-218ENST00000490283 CST9Q5W186 159 aa21.89■■□□□ 1.09
SEC13-218ENST00000490283 CD209Q9NNX6 404 aa21.89■■□□□ 1.09
SEC13-218ENST00000490283 GGA3Q9NZ52 723 aa21.89■■□□□ 1.09
SEC13-218ENST00000490283 MROH5Q6ZUA9 1318 aa21.88■■□□□ 1.09
SEC13-218ENST00000490283 UBTFL1P0CB47 393 aaPredicted RBP21.88■■□□□ 1.09
SEC13-218ENST00000490283 GTF2IP78347 998 aa21.88■■□□□ 1.09
SEC13-218ENST00000490283 ANKRD44Q8N8A2 993 aa21.88■■□□□ 1.09
SEC13-218ENST00000490283 HDAC9Q9UKV0 1011 aa21.88■■□□□ 1.09
SEC13-218ENST00000490283 TLL2Q9Y6L7 1015 aa21.88■■□□□ 1.09
SEC13-218ENST00000490283 SNAP23O00161 211 aa21.87■■□□□ 1.09
SEC13-218ENST00000490283 IPO8O15397 1037 aaKnown RBP21.87■■□□□ 1.09
SEC13-218ENST00000490283 UBE4AQ14139 1066 aa21.87■■□□□ 1.09
SEC13-218ENST00000490283 SCARF1Q14162 830 aa21.87■■□□□ 1.09
SEC13-218ENST00000490283 WDR33Q9C0J8 1336 aaKnown RBP21.86■■□□□ 1.09
SEC13-218ENST00000490283 PSME4Q14997 1843 aa21.86■■□□□ 1.09
SEC13-218ENST00000490283 ARHGAP45Q92619 1136 aa21.86■■□□□ 1.09
SEC13-218ENST00000490283 AIDAQ96BJ3 306 aa21.86■■□□□ 1.09
SEC13-218ENST00000490283 PUS3Q9BZE2 481 aaKnown RBP21.86■■□□□ 1.09
SEC13-218ENST00000490283 GRM1Q13255 1194 aa21.85■■□□□ 1.09
SEC13-218ENST00000490283 METTL24Q5JXM2 366 aa21.85■■□□□ 1.09
SEC13-218ENST00000490283 ANGEL2Q5VTE6 544 aaKnown RBP21.85■■□□□ 1.09
SEC13-218ENST00000490283 MXD3Q9BW11 206 aa21.85■■□□□ 1.09
SEC13-218ENST00000490283 TRPM7Q96QT4 1865 aa21.84■■□□□ 1.09
SEC13-218ENST00000490283 ADM5C9JUS6 153 aa21.84■■□□□ 1.09
SEC13-218ENST00000490283 SAPCD2Q86UD0 394 aa21.84■■□□□ 1.09
SEC13-218ENST00000490283 CAPNS2Q96L46 248 aa21.84■■□□□ 1.09
SEC13-218ENST00000490283 RIPOR2Q9Y4F9 1068 aa21.84■■□□□ 1.09
SEC13-218ENST00000490283 PITPNM2Q9BZ72 1349 aa21.83■■□□□ 1.09
SEC13-218ENST00000490283 IRS2Q9Y4H2 1338 aa21.83■■□□□ 1.09
SEC13-218ENST00000490283 IL1R1P14778 569 aa21.83■■□□□ 1.09
SEC13-218ENST00000490283 KIAA0825Q8IV33 1275 aa21.83■■□□□ 1.09
SEC13-218ENST00000490283 MAP2K1Q02750 393 aaPredicted RBP21.82■■□□□ 1.08
SEC13-218ENST00000490283 CYP4F22Q6NT55 531 aa21.82■■□□□ 1.08
SEC13-218ENST00000490283 VPS37DQ86XT2 251 aa21.82■■□□□ 1.08
SEC13-218ENST00000490283 C2orf69Q8N8R5 385 aa21.82■■□□□ 1.08
SEC13-218ENST00000490283 FRAT1Q92837 279 aaPredicted RBP21.82■■□□□ 1.08
SEC13-218ENST00000490283 HHIPL1Q96JK4 782 aa21.82■■□□□ 1.08
SEC13-218ENST00000490283 ASTN2O75129 1339 aaPredicted RBP21.81■■□□□ 1.08
SEC13-218ENST00000490283 HIBADHP31937 336 aaKnown RBP21.81■■□□□ 1.08
SEC13-218ENST00000490283 LRRC24Q50LG9 513 aa21.81■■□□□ 1.08
SEC13-218ENST00000490283 GBA2Q9HCG7 927 aaPredicted RBP21.81■■□□□ 1.08
SEC13-218ENST00000490283 HUNKP57058 714 aa21.8■■□□□ 1.08
SEC13-218ENST00000490283 FKBP1AP62942 108 aaKnown RBP21.8■■□□□ 1.08
SEC13-218ENST00000490283 CAVIN4Q5BKX8 364 aa21.8■■□□□ 1.08
SEC13-218ENST00000490283 KLHDC4Q8TBB5 520 aa21.8■■□□□ 1.08
SEC13-218ENST00000490283 WNT10BO00744 389 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 SASH1O94885 1247 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 PDE8BO95263 885 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 GNAI3P08754 354 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 GYG1P46976 350 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 NBPF9Q3BBW0 867 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 CDCA5Q96FF9 252 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 BEGAINQ9BUH8 593 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 A0A1B0GUL6 1792 aa21.79■■□□□ 1.08
SEC13-218ENST00000490283 EYA2O00167 538 aa21.78■■□□□ 1.08
SEC13-218ENST00000490283 FRAT2O75474 233 aaPredicted RBP21.78■■□□□ 1.08
SEC13-218ENST00000490283 DLGAP5Q15398 846 aa21.78■■□□□ 1.08
SEC13-218ENST00000490283 INTS3Q68E01 1043 aaKnown RBP21.78■■□□□ 1.08
SEC13-218ENST00000490283 DLK2Q6UY11 383 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms