RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 DBNDD1Q9H9R9 158 aa22.54■■□□□ 1.2
SRM-206ENST00000490101 PNMA6EA0A0J9YXQ4 647 aa22.53■■□□□ 1.2
SRM-206ENST00000490101 POLA2Q14181 598 aa22.53■■□□□ 1.2
SRM-206ENST00000490101 RABL6Q3YEC7 729 aaPredicted RBP22.53■■□□□ 1.2
SRM-206ENST00000490101 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
SRM-206ENST00000490101 GCC1Q96CN9 775 aa22.53■■□□□ 1.2
SRM-206ENST00000490101 GPR101Q96P66 508 aaPredicted RBP22.53■■□□□ 1.2
SRM-206ENST00000490101 PLA2G12BQ9BX93 195 aa22.53■■□□□ 1.2
SRM-206ENST00000490101 DCTPP1Q9H773 170 aa22.53■■□□□ 1.2
SRM-206ENST00000490101 WDR33Q9C0J8 1336 aaKnown RBP22.53■■□□□ 1.2
SRM-206ENST00000490101 SHTN1A0MZ66 631 aa22.52■■□□□ 1.2
SRM-206ENST00000490101 RPS8P62241 208 aaKnown RBP22.52■■□□□ 1.2
SRM-206ENST00000490101 FOXO4P98177 505 aa22.52■■□□□ 1.2
SRM-206ENST00000490101 SEC31BQ9NQW1 1179 aa22.52■■□□□ 1.2
SRM-206ENST00000490101 POLLQ9UGP5 575 aa22.52■■□□□ 1.2
SRM-206ENST00000490101 ZBTB12Q9Y330 459 aaPredicted RBP22.52■■□□□ 1.2
SRM-206ENST00000490101 TRPM7Q96QT4 1865 aa22.51■■□□□ 1.19
SRM-206ENST00000490101 CST9Q5W186 159 aa22.51■■□□□ 1.19
SRM-206ENST00000490101 TRPM4Q8TD43 1214 aa22.51■■□□□ 1.19
SRM-206ENST00000490101 CCDC85AQ96PX6 553 aaPredicted RBP22.51■■□□□ 1.19
SRM-206ENST00000490101 GLIS2Q9BZE0 524 aaPredicted RBP22.51■■□□□ 1.19
SRM-206ENST00000490101 WBP1LQ9NX94 342 aa22.51■■□□□ 1.19
SRM-206ENST00000490101 CNOT7Q9UIV1 285 aaKnown RBP22.51■■□□□ 1.19
SRM-206ENST00000490101 PSMD14O00487 310 aa22.5■■□□□ 1.19
SRM-206ENST00000490101 SRGAP3O43295 1099 aa22.5■■□□□ 1.19
SRM-206ENST00000490101 CTCFP49711 727 aaPredicted RBP22.5■■□□□ 1.19
SRM-206ENST00000490101 DOK7Q18PE1 504 aa22.5■■□□□ 1.19
SRM-206ENST00000490101 HSP90B1P14625 803 aaKnown RBP22.49■■□□□ 1.19
SRM-206ENST00000490101 HIRAP54198 1017 aaPredicted RBP22.49■■□□□ 1.19
SRM-206ENST00000490101 CYP4F22Q6NT55 531 aa22.49■■□□□ 1.19
SRM-206ENST00000490101 MICALL2Q8IY33 904 aa22.49■■□□□ 1.19
SRM-206ENST00000490101 TBC1D16Q8TBP0 767 aa22.49■■□□□ 1.19
SRM-206ENST00000490101 CAPNS2Q96L46 248 aa22.49■■□□□ 1.19
SRM-206ENST00000490101 EYA3Q99504 573 aa22.49■■□□□ 1.19
SRM-206ENST00000490101 ZNF408Q9H9D4 720 aa22.49■■□□□ 1.19
SRM-206ENST00000490101 H7C1D1 291 aa22.48■■□□□ 1.19
SRM-206ENST00000490101 ECE2O60344 883 aa22.48■■□□□ 1.19
SRM-206ENST00000490101 CELF2O95319 508 aaKnown RBP22.48■■□□□ 1.19
SRM-206ENST00000490101 CCDC152Q4G0S7 254 aa22.48■■□□□ 1.19
SRM-206ENST00000490101 PDE8AO60658 829 aa22.47■■□□□ 1.19
SRM-206ENST00000490101 LBX1P52954 281 aa22.47■■□□□ 1.19
SRM-206ENST00000490101 LMBR1LQ6UX01 489 aa22.47■■□□□ 1.19
SRM-206ENST00000490101 KCNQ5Q9NR82 932 aa22.47■■□□□ 1.19
SRM-206ENST00000490101 ANKIB1Q9P2G1 1089 aa22.47■■□□□ 1.19
SRM-206ENST00000490101 TLL2Q9Y6L7 1015 aa22.47■■□□□ 1.19
SRM-206ENST00000490101 UFL1O94874 794 aa22.46■■□□□ 1.19
SRM-206ENST00000490101 CSF1RP07333 972 aa22.46■■□□□ 1.19
SRM-206ENST00000490101 ECE1P42892 770 aa22.46■■□□□ 1.19
SRM-206ENST00000490101 MAP2K1Q02750 393 aaPredicted RBP22.46■■□□□ 1.19
SRM-206ENST00000490101 ZC3H15Q8WU90 426 aaKnown RBP22.46■■□□□ 1.19
SRM-206ENST00000490101 ZC3H12CQ9C0D7 883 aaKnown RBP22.46■■□□□ 1.19
SRM-206ENST00000490101 PRDM10Q9NQV6 1147 aa22.46■■□□□ 1.19
SRM-206ENST00000490101 G3V3G9 751 aa22.45■■□□□ 1.18
SRM-206ENST00000490101 NUCB1Q02818 461 aa22.45■■□□□ 1.18
SRM-206ENST00000490101 TBC1D10BQ4KMP7 808 aaPredicted RBP22.45■■□□□ 1.18
SRM-206ENST00000490101 DCAF8Q5TAQ9 597 aa22.45■■□□□ 1.18
SRM-206ENST00000490101 SAMD7Q7Z3H4 446 aa22.45■■□□□ 1.18
SRM-206ENST00000490101 PGAP2Q9UHJ9 254 aa22.45■■□□□ 1.18
SRM-206ENST00000490101 NOP58Q9Y2X3 529 aaKnown RBP22.45■■□□□ 1.18
SRM-206ENST00000490101 RBM26Q5T8P6 1007 aaKnown RBP22.44■■□□□ 1.18
SRM-206ENST00000490101 RTL9Q8NET4 1388 aa22.44■■□□□ 1.18
SRM-206ENST00000490101 DPF2Q92785 391 aa22.44■■□□□ 1.18
SRM-206ENST00000490101 GGA1Q9UJY5 639 aa22.44■■□□□ 1.18
SRM-206ENST00000490101 HSPA8P11142 646 aaKnown RBP22.43■■□□□ 1.18
SRM-206ENST00000490101 RFX5P48382 616 aaPredicted RBP22.43■■□□□ 1.18
SRM-206ENST00000490101 CTSWP56202 376 aa22.43■■□□□ 1.18
SRM-206ENST00000490101 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
SRM-206ENST00000490101 USP48Q86UV5 1035 aa22.43■■□□□ 1.18
SRM-206ENST00000490101 PODXL2Q9NZ53 605 aa22.43■■□□□ 1.18
SRM-206ENST00000490101 THSD7BQ9C0I4 1608 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 AOC2O75106 756 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 RAB11FIP3O75154 756 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 EGFRP00533 1210 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 HSP90AB4PQ58FF6 505 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 DLK2Q6UY11 383 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 SAPCD2Q86UD0 394 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 ANKRD18AQ8IVF6 992 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 TTLL11Q8NHH1 800 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 COPRSQ9NQ92 184 aa22.42■■□□□ 1.18
SRM-206ENST00000490101 SURF6O75683 361 aaKnown RBP22.41■■□□□ 1.18
SRM-206ENST00000490101 RPS12P25398 132 aaKnown RBP22.41■■□□□ 1.18
SRM-206ENST00000490101 ANKRD45Q5TZF3 282 aa22.41■■□□□ 1.18
SRM-206ENST00000490101 BEGAINQ9BUH8 593 aa22.41■■□□□ 1.18
SRM-206ENST00000490101 EXOC6BQ9Y2D4 811 aa22.41■■□□□ 1.18
SRM-206ENST00000490101 SCN9AQ15858 1988 aa22.4■■□□□ 1.18
SRM-206ENST00000490101 MYH3P11055 1940 aa22.4■■□□□ 1.18
SRM-206ENST00000490101 CHD1LQ86WJ1 897 aa22.4■■□□□ 1.18
SRM-206ENST00000490101 XDHP47989 1333 aa22.39■■□□□ 1.18
SRM-206ENST00000490101 PTPN12Q05209 780 aaKnown RBP22.39■■□□□ 1.17
SRM-206ENST00000490101 PA2G4Q9UQ80 394 aaKnown RBP22.39■■□□□ 1.17
SRM-206ENST00000490101 CHMP3Q9Y3E7 222 aa22.39■■□□□ 1.17
SRM-206ENST00000490101 KRT26Q7Z3Y9 468 aa22.38■■□□□ 1.17
SRM-206ENST00000490101 CDC5LQ99459 802 aaKnown RBP22.38■■□□□ 1.17
SRM-206ENST00000490101 SPEF2Q9C093 1822 aa22.38■■□□□ 1.17
SRM-206ENST00000490101 VIL1P09327 827 aaKnown RBP22.37■■□□□ 1.17
SRM-206ENST00000490101 CCDC57Q2TAC2 916 aa22.37■■□□□ 1.17
SRM-206ENST00000490101 KIF4BQ2VIQ3 1234 aa22.37■■□□□ 1.17
SRM-206ENST00000490101 GREM2Q9H772 168 aa22.37■■□□□ 1.17
SRM-206ENST00000490101 ADM5C9JUS6 153 aa22.36■■□□□ 1.17
SRM-206ENST00000490101 G3BP1Q13283 466 aaKnown RBP eCLIP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms