RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 RFX1P22670 979 aa5.81□□□□□ -1.48
DEPDC1-204ENST00000489862 GDF6Q6KF10 455 aaPredicted RBP5.81□□□□□ -1.48
DEPDC1-204ENST00000489862 FAM168AQ92567 244 aa5.81□□□□□ -1.48
DEPDC1-204ENST00000489862 NGLY1Q96IV0 654 aa5.81□□□□□ -1.48
DEPDC1-204ENST00000489862 METTL22Q9BUU2 404 aaPredicted RBP5.81□□□□□ -1.48
DEPDC1-204ENST00000489862 PAK6Q9NQU5 681 aaPredicted RBP5.81□□□□□ -1.48
DEPDC1-204ENST00000489862 MLLT1Q03111 559 aaPredicted RBP5.8□□□□□ -1.48
DEPDC1-204ENST00000489862 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.8□□□□□ -1.48
DEPDC1-204ENST00000489862 LMCD1Q9NZU5 365 aa5.8□□□□□ -1.48
DEPDC1-204ENST00000489862 LRRC56Q8IYG6 542 aaPredicted RBP5.79□□□□□ -1.48
DEPDC1-204ENST00000489862 STAG2Q8N3U4 1231 aa5.79□□□□□ -1.48
DEPDC1-204ENST00000489862 ZSCAN22P10073 491 aaPredicted RBP5.78□□□□□ -1.48
DEPDC1-204ENST00000489862 CD68P34810 354 aaPredicted RBP5.78□□□□□ -1.48
DEPDC1-204ENST00000489862 LCNL1Q6ZST4 164 aa5.78□□□□□ -1.48
DEPDC1-204ENST00000489862 ATG4DQ86TL0 474 aaPredicted RBP5.78□□□□□ -1.48
DEPDC1-204ENST00000489862 PLD4Q96BZ4 506 aa5.78□□□□□ -1.48
DEPDC1-204ENST00000489862 RBSNQ9H1K0 784 aa5.78□□□□□ -1.48
DEPDC1-204ENST00000489862 CYP26A1O43174 497 aa5.77□□□□□ -1.48
DEPDC1-204ENST00000489862 NRLP54845 237 aa5.77□□□□□ -1.48
DEPDC1-204ENST00000489862 ERICH6Q7L0X2 663 aa5.77□□□□□ -1.48
DEPDC1-204ENST00000489862 CILP2Q8IUL8 1156 aa5.77□□□□□ -1.48
DEPDC1-204ENST00000489862 PPME1Q9Y570 386 aa5.77□□□□□ -1.48
DEPDC1-204ENST00000489862 F13BP05160 661 aa5.77□□□□□ -1.49
DEPDC1-204ENST00000489862 IGFBP4P22692 258 aa5.77□□□□□ -1.49
DEPDC1-204ENST00000489862 CTSWP56202 376 aa5.77□□□□□ -1.49
DEPDC1-204ENST00000489862 ANKRD34AQ69YU3 496 aa5.77□□□□□ -1.49
DEPDC1-204ENST00000489862 FBXL6Q8N531 539 aa5.77□□□□□ -1.49
DEPDC1-204ENST00000489862 PPP1R16BQ96T49 567 aa5.77□□□□□ -1.49
DEPDC1-204ENST00000489862 WISP1O95388 367 aa5.76□□□□□ -1.49
DEPDC1-204ENST00000489862 GHRHP01286 108 aa5.76□□□□□ -1.49
DEPDC1-204ENST00000489862 DUOXA2Q1HG44 320 aa5.76□□□□□ -1.49
DEPDC1-204ENST00000489862 C1QL4Q86Z23 238 aa5.76□□□□□ -1.49
DEPDC1-204ENST00000489862 FAM200AQ8TCP9 573 aa5.76□□□□□ -1.49
DEPDC1-204ENST00000489862 RARAP10276 462 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 MESP2Q0VG99 397 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 PLCL1Q15111 1095 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 IER5Q5VY09 327 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 HFE2Q6ZVN8 426 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 ANKLE2Q86XL3 938 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 ZMYND15Q9H091 742 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 C11orf16Q9NQ32 467 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 NOVA2Q9UNW9 492 aaKnown RBP5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 BCS1LQ9Y276 419 aa5.75□□□□□ -1.49
DEPDC1-204ENST00000489862 WEE1P30291 646 aa5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 KRTAP1-1Q07627 177 aa5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 KLK14Q9P0G3 267 aa5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 GAS2O43903 313 aaKnown RBP5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 TRIM26Q12899 539 aaPredicted RBP5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 ZNF792Q3KQV3 632 aa5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 KIAA1211Q6ZU35 1233 aa5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 KRT25Q7Z3Z0 450 aa5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 QTRT2Q9H974 415 aaKnown RBP5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 FAM53CQ9NYF3 392 aa5.74□□□□□ -1.49
DEPDC1-204ENST00000489862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.73□□□□□ -1.49
DEPDC1-204ENST00000489862 TSPAN15O95858 294 aa5.73□□□□□ -1.49
DEPDC1-204ENST00000489862 GALNT11Q8NCW6 608 aa5.73□□□□□ -1.49
DEPDC1-204ENST00000489862 ZFATQ9P243 1243 aa5.73□□□□□ -1.49
DEPDC1-204ENST00000489862 DMGDHQ9UI17 866 aaKnown RBP5.73□□□□□ -1.49
DEPDC1-204ENST00000489862 TGFBR3LH3BV60 316 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 FOXO3O43524 673 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 MAP4P27816 1152 aaKnown RBP5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 SRPK2P78362 688 aaKnown RBP5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 DGKZQ13574 1117 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 ECM1Q16610 540 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 VTI1AQ96AJ9 217 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 PRIMPOLQ96LW4 560 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 ZMIZ1Q9ULJ6 1067 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 SLC5A6Q9Y289 635 aa5.72□□□□□ -1.49
DEPDC1-204ENST00000489862 LOC102724428A0A0B4J2F2 783 aa5.71□□□□□ -1.5
DEPDC1-204ENST00000489862 SIK1P57059 783 aa5.71□□□□□ -1.5
DEPDC1-204ENST00000489862 KLHL23Q8NBE8 558 aa5.71□□□□□ -1.5
DEPDC1-204ENST00000489862 STK32AQ8WU08 396 aa5.71□□□□□ -1.5
DEPDC1-204ENST00000489862 LRRC10BA6NIK2 292 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 PRMT3O60678 531 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 RXRBP28702 533 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 PREPP48147 710 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 IDH3AP50213 366 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 FKBP5Q13451 457 aaPredicted RBP5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 FAM117BQ6P1L5 589 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 STK11IPQ8N1F8 1099 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 IFT43Q96FT9 208 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 LRFN2Q9ULH4 789 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 ARID3CA6NKF2 412 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 LINC01387J3KSC0 135 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 INHBBP09529 407 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 TARSP26639 723 aaKnown RBP5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 INPP5BP32019 993 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 FAM69CQ0P6D2 419 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 C11orf91Q3C1V1 193 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 FDX2Q6P4F2 183 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 ADAM19Q9H013 955 aa5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 TLR7Q9NYK1 1049 aaKnown RBP5.7□□□□□ -1.5
DEPDC1-204ENST00000489862 ACIN1Q9UKV3 1341 aaKnown RBP5.69□□□□□ -1.5
DEPDC1-204ENST00000489862 MICAL2O94851 1124 aa5.69□□□□□ -1.5
DEPDC1-204ENST00000489862 ELOAQ14241 798 aaKnown RBP5.69□□□□□ -1.5
DEPDC1-204ENST00000489862 PAOXQ6QHF9 649 aa5.69□□□□□ -1.5
DEPDC1-204ENST00000489862 MYO19Q96H55 970 aa5.69□□□□□ -1.5
DEPDC1-204ENST00000489862 RNF208Q9H0X6 261 aa5.69□□□□□ -1.5
DEPDC1-204ENST00000489862 KCNK4Q9NYG8 393 aa5.69□□□□□ -1.5
DEPDC1-204ENST00000489862 PSAPP07602 524 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms