RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 SLC5A1P13866 664 aa17.51■□□□□ 0.39
CLDN11-209ENST00000489485 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLDN11-209ENST00000489485 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
CLDN11-209ENST00000489485 AACSQ86V21 672 aa17.51■□□□□ 0.39
CLDN11-209ENST00000489485 SUPT20HQ8NEM7 779 aa17.51■□□□□ 0.39
CLDN11-209ENST00000489485 EAF2Q96CJ1 260 aaPredicted RBP17.51■□□□□ 0.39
CLDN11-209ENST00000489485 PSMD1Q99460 953 aa17.51■□□□□ 0.39
CLDN11-209ENST00000489485 GPR108Q9NPR9 543 aa17.51■□□□□ 0.39
CLDN11-209ENST00000489485 NFKBIEO00221 500 aa17.5■□□□□ 0.39
CLDN11-209ENST00000489485 FGFR2P21802 821 aa17.5■□□□□ 0.39
CLDN11-209ENST00000489485 EYA3Q99504 573 aa17.5■□□□□ 0.39
CLDN11-209ENST00000489485 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
CLDN11-209ENST00000489485 ZC3H12CQ9C0D7 883 aaKnown RBP17.5■□□□□ 0.39
CLDN11-209ENST00000489485 CCDC8Q9H0W5 538 aaPredicted RBP17.5■□□□□ 0.39
CLDN11-209ENST00000489485 ZNF609O15014 1411 aa17.5■□□□□ 0.39
CLDN11-209ENST00000489485 KLRK1P26718 216 aa17.5■□□□□ 0.39
CLDN11-209ENST00000489485 ZNF277Q9NRM2 450 aaPredicted RBP17.5■□□□□ 0.39
CLDN11-209ENST00000489485 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
CLDN11-209ENST00000489485 RASSF7Q02833 373 aa17.49■□□□□ 0.39
CLDN11-209ENST00000489485 GORABQ5T7V8 394 aa17.49■□□□□ 0.39
CLDN11-209ENST00000489485 TXNRD3Q86VQ6 643 aa17.49■□□□□ 0.39
CLDN11-209ENST00000489485 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
CLDN11-209ENST00000489485 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 GRIN3BO60391 1043 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 AOC3Q16853 763 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 CAVIN4Q5BKX8 364 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 C16orf71Q8IYS4 520 aaPredicted RBP17.48■□□□□ 0.39
CLDN11-209ENST00000489485 XAGE2Q96GT9 111 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 G3V3G9 751 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 ADORA1P30542 326 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 GYG1P46976 350 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 DCAF8Q5TAQ9 597 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 VPS37DQ86XT2 251 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 DBNDD2Q9BQY9 259 aa17.48■□□□□ 0.39
CLDN11-209ENST00000489485 TLR7Q9NYK1 1049 aaKnown RBP17.48■□□□□ 0.39
CLDN11-209ENST00000489485 RGS3P49796 1198 aa17.47■□□□□ 0.39
CLDN11-209ENST00000489485 DBNLQ9UJU6 430 aaKnown RBP17.47■□□□□ 0.39
CLDN11-209ENST00000489485 LTBP3Q9NS15 1303 aa17.46■□□□□ 0.39
CLDN11-209ENST00000489485 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
CLDN11-209ENST00000489485 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.39
CLDN11-209ENST00000489485 LARGE2Q8N3Y3 721 aa17.46■□□□□ 0.39
CLDN11-209ENST00000489485 FAM84BQ96KN1 310 aaPredicted RBP17.46■□□□□ 0.39
CLDN11-209ENST00000489485 ARAP2Q8WZ64 1704 aa17.46■□□□□ 0.39
CLDN11-209ENST00000489485 PDE4AP27815 886 aa17.46■□□□□ 0.38
CLDN11-209ENST00000489485 BCAMP50895 628 aa17.46■□□□□ 0.38
CLDN11-209ENST00000489485 DOK7Q18PE1 504 aa17.46■□□□□ 0.38
CLDN11-209ENST00000489485 ZNF804AQ7Z570 1209 aa17.46■□□□□ 0.38
CLDN11-209ENST00000489485 OTUD7AQ8TE49 926 aaPredicted RBP17.46■□□□□ 0.38
CLDN11-209ENST00000489485 HIBADHP31937 336 aaKnown RBP17.45■□□□□ 0.38
CLDN11-209ENST00000489485 C15orf52Q6ZUT6 534 aaKnown RBP17.45■□□□□ 0.38
CLDN11-209ENST00000489485 SBF1O95248 1867 aa17.45■□□□□ 0.38
CLDN11-209ENST00000489485 IRS2Q9Y4H2 1338 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 CHD4Q14839 1912 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 FRAT2O75474 233 aaPredicted RBP17.44■□□□□ 0.38
CLDN11-209ENST00000489485 LMNB1P20700 586 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 PHKA1P46020 1223 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
CLDN11-209ENST00000489485 IQSEC3Q9UPP2 1182 aaPredicted RBP17.44■□□□□ 0.38
CLDN11-209ENST00000489485 PRELPP51888 382 aa17.43■□□□□ 0.38
CLDN11-209ENST00000489485 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
CLDN11-209ENST00000489485 FBXO33Q7Z6M2 555 aa17.43■□□□□ 0.38
CLDN11-209ENST00000489485 GPATCH3Q96I76 525 aa17.42■□□□□ 0.38
CLDN11-209ENST00000489485 COA1Q9GZY4 146 aa17.42■□□□□ 0.38
CLDN11-209ENST00000489485 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
CLDN11-209ENST00000489485 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
CLDN11-209ENST00000489485 ECE2O60344 883 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 MX1P20591 662 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 NIM1KQ8IY84 436 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 TSHZ3Q63HK5 1081 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 ECHDC1Q9NTX5 307 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 RNF181Q9P0P0 153 aa17.41■□□□□ 0.38
CLDN11-209ENST00000489485 DICER1Q9UPY3 1922 aaKnown RBP17.4■□□□□ 0.38
CLDN11-209ENST00000489485 COL4A5P29400 1685 aa17.4■□□□□ 0.38
CLDN11-209ENST00000489485 PODNQ7Z5L7 613 aa17.4■□□□□ 0.38
CLDN11-209ENST00000489485 UQCRFS1P1P0C7P4 283 aa17.39■□□□□ 0.38
CLDN11-209ENST00000489485 IL1R1P14778 569 aa17.39■□□□□ 0.38
CLDN11-209ENST00000489485 PDE1AP54750 535 aa17.39■□□□□ 0.37
CLDN11-209ENST00000489485 C9orf131Q5VYM1 1079 aa17.39■□□□□ 0.37
CLDN11-209ENST00000489485 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
CLDN11-209ENST00000489485 FBXW7Q969H0 707 aa17.39■□□□□ 0.37
CLDN11-209ENST00000489485 ZNRF3Q9ULT6 936 aa17.39■□□□□ 0.37
CLDN11-209ENST00000489485 JAG2Q9Y219 1238 aa17.39■□□□□ 0.37
CLDN11-209ENST00000489485 SALL3Q9BXA9 1300 aa17.39■□□□□ 0.37
CLDN11-209ENST00000489485 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
CLDN11-209ENST00000489485 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
CLDN11-209ENST00000489485 KCNQ5Q9NR82 932 aa17.38■□□□□ 0.37
CLDN11-209ENST00000489485 TTC41PQ6P2S7 1318 aa17.38■□□□□ 0.37
CLDN11-209ENST00000489485 SCN9AQ15858 1988 aa17.38■□□□□ 0.37
CLDN11-209ENST00000489485 MCAMP43121 646 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
CLDN11-209ENST00000489485 SCARF1Q14162 830 aa17.37■□□□□ 0.37
CLDN11-209ENST00000489485 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms