RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 NF2P35240 595 aa13.32□□□□□ -0.28
CHKB-211ENST00000489453 BSDC1Q9NW68 430 aaPredicted RBP13.32□□□□□ -0.28
CHKB-211ENST00000489453 MYO3BQ8WXR4 1341 aa13.32□□□□□ -0.28
CHKB-211ENST00000489453 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
CHKB-211ENST00000489453 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 KCNJ4P48050 445 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
CHKB-211ENST00000489453 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 TTLL11Q8NHH1 800 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 GMLQ99445 158 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 GREM2Q9H772 168 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
CHKB-211ENST00000489453 IGKV5-2P06315 115 aa13.3□□□□□ -0.28
CHKB-211ENST00000489453 CWF19L2Q2TBE0 894 aaKnown RBP13.3□□□□□ -0.28
CHKB-211ENST00000489453 TSPYL6Q8N831 410 aa13.3□□□□□ -0.28
CHKB-211ENST00000489453 TSR2Q969E8 191 aaKnown RBP13.3□□□□□ -0.28
CHKB-211ENST00000489453 COA1Q9GZY4 146 aa13.3□□□□□ -0.28
CHKB-211ENST00000489453 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
CHKB-211ENST00000489453 NEURL1BA8MQ27 555 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 UBE2Q2LH0YL09 131 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 SOX10P56693 466 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 TWISTNBQ3B726 338 aaPredicted RBP13.29□□□□□ -0.28
CHKB-211ENST00000489453 NBPF9Q3BBW0 867 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 STRIP1Q5VSL9 837 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 CTU1Q7Z7A3 348 aaKnown RBP13.29□□□□□ -0.28
CHKB-211ENST00000489453 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 ANKRD2Q9GZV1 360 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 LEMD3Q9Y2U8 911 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 A0A1B0GUL6 1792 aa13.29□□□□□ -0.28
CHKB-211ENST00000489453 SLC34A2O95436 690 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 MMP14P50281 582 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 DACT2Q5SW24 774 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 PRAMEF18Q5VWM3 479 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 MOB2Q70IA6 237 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
CHKB-211ENST00000489453 MXD3Q9BW11 206 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 MYH16Q9H6N6 1097 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
CHKB-211ENST00000489453 WNT10BO00744 389 aa13.27□□□□□ -0.29
CHKB-211ENST00000489453 SASH1O94885 1247 aa13.27□□□□□ -0.29
CHKB-211ENST00000489453 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
CHKB-211ENST00000489453 ITGA6P23229 1130 aa13.27□□□□□ -0.29
CHKB-211ENST00000489453 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
CHKB-211ENST00000489453 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
CHKB-211ENST00000489453 ARMC9Q7Z3E5 817 aa13.27□□□□□ -0.29
CHKB-211ENST00000489453 WTIPA6NIX2 430 aaPredicted RBP13.26□□□□□ -0.29
CHKB-211ENST00000489453 H7C1W4 665 aa13.26□□□□□ -0.29
CHKB-211ENST00000489453 SREBF2Q12772 1141 aa13.26□□□□□ -0.29
CHKB-211ENST00000489453 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
CHKB-211ENST00000489453 KIAA0825Q8IV33 1275 aa13.26□□□□□ -0.29
CHKB-211ENST00000489453 TNRC18O15417 2968 aaPredicted RBP13.25□□□□□ -0.29
CHKB-211ENST00000489453 ANKRD18BA2A2Z9 1011 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 TBC1D8O95759 1140 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 GTF2IP78347 998 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 FLIIQ13045 1269 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 PRKG1Q13976 671 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 GCKRQ14397 625 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 PKN2Q16513 984 aaKnown RBP13.25□□□□□ -0.29
CHKB-211ENST00000489453 CCDC27Q2M243 656 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 G2E3Q7L622 706 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 PLA2G12BQ9BX93 195 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
CHKB-211ENST00000489453 COL1A1P02452 1464 aaPredicted RBP13.24□□□□□ -0.29
CHKB-211ENST00000489453 TXNRD3Q86VQ6 643 aa13.24□□□□□ -0.29
CHKB-211ENST00000489453 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
CHKB-211ENST00000489453 DNAAF4Q8WXU2 420 aa13.24□□□□□ -0.29
CHKB-211ENST00000489453 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
CHKB-211ENST00000489453 IL16Q14005 1332 aa13.23□□□□□ -0.29
CHKB-211ENST00000489453 KLRK1P26718 216 aa13.23□□□□□ -0.29
CHKB-211ENST00000489453 CHRNDQ07001 517 aa13.23□□□□□ -0.29
CHKB-211ENST00000489453 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
CHKB-211ENST00000489453 LINS1Q8NG48 757 aa13.23□□□□□ -0.29
CHKB-211ENST00000489453 ZNF296Q8WUU4 475 aaPredicted RBP13.23□□□□□ -0.29
CHKB-211ENST00000489453 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
CHKB-211ENST00000489453 HPS5Q9UPZ3 1129 aa13.23□□□□□ -0.29
CHKB-211ENST00000489453 MYO1BO43795 1136 aa13.22□□□□□ -0.29
CHKB-211ENST00000489453 TM4SF4P48230 202 aa13.22□□□□□ -0.29
CHKB-211ENST00000489453 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
CHKB-211ENST00000489453 IFIT5Q13325 482 aaKnown RBP13.22□□□□□ -0.29
CHKB-211ENST00000489453 TAF7LQ5H9L4 462 aa13.22□□□□□ -0.29
CHKB-211ENST00000489453 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
CHKB-211ENST00000489453 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.29
CHKB-211ENST00000489453 CSF1RP07333 972 aa13.21□□□□□ -0.29
CHKB-211ENST00000489453 CD209Q9NNX6 404 aa13.21□□□□□ -0.29
CHKB-211ENST00000489453 LAMB1P07942 1786 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 ARAP2Q8WZ64 1704 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
CHKB-211ENST00000489453 GPR25O00155 361 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
CHKB-211ENST00000489453 FKTNO75072 461 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 TAF5LO75529 589 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 CASP7P55210 303 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 SPRYD7Q5W111 196 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
CHKB-211ENST00000489453 SLC10A4Q96EP9 437 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
CHKB-211ENST00000489453 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms