RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
LINC00173-204ENST00000489452 FAM155AB1AL88 458 aaPredicted RBP17.09■□□□□ 0.33
LINC00173-204ENST00000489452 ITGA6P23229 1130 aa17.09■□□□□ 0.33
LINC00173-204ENST00000489452 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
LINC00173-204ENST00000489452 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
LINC00173-204ENST00000489452 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
LINC00173-204ENST00000489452 IL16Q14005 1332 aa17.09■□□□□ 0.33
LINC00173-204ENST00000489452 CASP8AP2Q9UKL3 1982 aa17.08■□□□□ 0.33
LINC00173-204ENST00000489452 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.32
LINC00173-204ENST00000489452 FANCIQ9NVI1 1328 aa17.08■□□□□ 0.32
LINC00173-204ENST00000489452 ANP32CO43423 234 aa17.08■□□□□ 0.32
LINC00173-204ENST00000489452 VAMP4O75379 141 aa17.08■□□□□ 0.32
LINC00173-204ENST00000489452 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.32
LINC00173-204ENST00000489452 FAM161AQ3B820 660 aa17.08■□□□□ 0.32
LINC00173-204ENST00000489452 NBPF9Q3BBW0 867 aa17.08■□□□□ 0.32
LINC00173-204ENST00000489452 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
LINC00173-204ENST00000489452 MOB2Q70IA6 237 aa17.07■□□□□ 0.32
LINC00173-204ENST00000489452 OGFOD1Q8N543 542 aa17.07■□□□□ 0.32
LINC00173-204ENST00000489452 MCOLN1Q9GZU1 580 aa17.07■□□□□ 0.32
LINC00173-204ENST00000489452 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
LINC00173-204ENST00000489452 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
LINC00173-204ENST00000489452 MED23Q9ULK4 1368 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 F6X3S4 739 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 SNAP23O00161 211 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 TRPA1O75762 1119 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 KLRK1P26718 216 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 KCNJ4P48050 445 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 CASP7P55210 303 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 DGKZQ13574 1117 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
LINC00173-204ENST00000489452 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
LINC00173-204ENST00000489452 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
LINC00173-204ENST00000489452 CSF1RP07333 972 aa17.05■□□□□ 0.32
LINC00173-204ENST00000489452 CSRNP1Q96S65 589 aa17.05■□□□□ 0.32
LINC00173-204ENST00000489452 PLA2G12BQ9BX93 195 aa17.05■□□□□ 0.32
LINC00173-204ENST00000489452 RNF186Q9NXI6 227 aa17.05■□□□□ 0.32
LINC00173-204ENST00000489452 ANKRD18BA2A2Z9 1011 aa17.04■□□□□ 0.32
LINC00173-204ENST00000489452 GTF2IP78347 998 aa17.04■□□□□ 0.32
LINC00173-204ENST00000489452 CHRNDQ07001 517 aa17.04■□□□□ 0.32
LINC00173-204ENST00000489452 TTLL12Q14166 644 aaPredicted RBP17.04■□□□□ 0.32
LINC00173-204ENST00000489452 STRIP1Q5VSL9 837 aa17.04■□□□□ 0.32
LINC00173-204ENST00000489452 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
LINC00173-204ENST00000489452 ZNF316A6NFI3 1004 aaPredicted RBP17.03■□□□□ 0.32
LINC00173-204ENST00000489452 TAF5LO75529 589 aa17.03■□□□□ 0.32
LINC00173-204ENST00000489452 SASH1O94885 1247 aa17.03■□□□□ 0.32
LINC00173-204ENST00000489452 SLC10A3P09131 477 aa17.03■□□□□ 0.32
LINC00173-204ENST00000489452 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
LINC00173-204ENST00000489452 KIAA0825Q8IV33 1275 aa17.03■□□□□ 0.32
LINC00173-204ENST00000489452 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
LINC00173-204ENST00000489452 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.32
LINC00173-204ENST00000489452 WNT10BO00744 389 aa17.02■□□□□ 0.32
LINC00173-204ENST00000489452 IFIT5Q13325 482 aaKnown RBP17.02■□□□□ 0.32
LINC00173-204ENST00000489452 SPEF2Q9C093 1822 aa17.02■□□□□ 0.31
LINC00173-204ENST00000489452 PLIN1O60240 522 aa17.01■□□□□ 0.31
LINC00173-204ENST00000489452 FOXO4P98177 505 aa17.01■□□□□ 0.31
LINC00173-204ENST00000489452 PRKG1Q13976 671 aa17.01■□□□□ 0.31
LINC00173-204ENST00000489452 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
LINC00173-204ENST00000489452 RASAL3Q86YV0 1011 aa17.01■□□□□ 0.31
LINC00173-204ENST00000489452 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
LINC00173-204ENST00000489452 ZNF609O15014 1411 aa17.01■□□□□ 0.31
LINC00173-204ENST00000489452 MYO3BQ8WXR4 1341 aa17■□□□□ 0.31
LINC00173-204ENST00000489452 MYH3P11055 1940 aa17■□□□□ 0.31
LINC00173-204ENST00000489452 FKBP1BP68106 108 aa17■□□□□ 0.31
LINC00173-204ENST00000489452 MKRN3Q13064 507 aaKnown RBP17■□□□□ 0.31
LINC00173-204ENST00000489452 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
LINC00173-204ENST00000489452 LMBR1LQ6UX01 489 aa17■□□□□ 0.31
LINC00173-204ENST00000489452 ZNF594Q96JF6 807 aaPredicted RBP17■□□□□ 0.31
LINC00173-204ENST00000489452 CD209Q9NNX6 404 aa17■□□□□ 0.31
LINC00173-204ENST00000489452 HDAC9Q9UKV0 1011 aa17■□□□□ 0.31
LINC00173-204ENST00000489452 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
LINC00173-204ENST00000489452 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
LINC00173-204ENST00000489452 SLC4A10Q6U841 1118 aa16.99■□□□□ 0.31
LINC00173-204ENST00000489452 SAGE1Q9NXZ1 904 aa16.99■□□□□ 0.31
LINC00173-204ENST00000489452 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
LINC00173-204ENST00000489452 F8W031 263 aaPredicted RBP16.98■□□□□ 0.31
LINC00173-204ENST00000489452 NF2P35240 595 aa16.98■□□□□ 0.31
LINC00173-204ENST00000489452 MLLT1Q03111 559 aaPredicted RBP16.98■□□□□ 0.31
LINC00173-204ENST00000489452 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
LINC00173-204ENST00000489452 DLGAP5Q15398 846 aa16.97■□□□□ 0.31
LINC00173-204ENST00000489452 CCDC57Q2TAC2 916 aa16.97■□□□□ 0.31
LINC00173-204ENST00000489452 LDHAL6AQ6ZMR3 332 aa16.97■□□□□ 0.31
LINC00173-204ENST00000489452 CNNM1Q9NRU3 951 aa16.97■□□□□ 0.31
LINC00173-204ENST00000489452 PSME4Q14997 1843 aa16.97■□□□□ 0.31
LINC00173-204ENST00000489452 GRM8O00222 908 aa16.96■□□□□ 0.31
LINC00173-204ENST00000489452 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
LINC00173-204ENST00000489452 CERS5Q8N5B7 392 aa16.96■□□□□ 0.31
LINC00173-204ENST00000489452 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
LINC00173-204ENST00000489452 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.31
LINC00173-204ENST00000489452 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
LINC00173-204ENST00000489452 MMP14P50281 582 aa16.95■□□□□ 0.3
LINC00173-204ENST00000489452 PTPN12Q05209 780 aaKnown RBP16.95■□□□□ 0.3
LINC00173-204ENST00000489452 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
LINC00173-204ENST00000489452 APOBEC3FQ8IUX4 373 aaKnown RBP16.95■□□□□ 0.3
LINC00173-204ENST00000489452 RGS19P49795 217 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms