RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
LMX1A-204ENST00000489443 COA1Q9GZY4 146 aa19.67■□□□□ 0.74
LMX1A-204ENST00000489443 MROH5Q6ZUA9 1318 aa19.67■□□□□ 0.74
LMX1A-204ENST00000489443 GNAI2P04899 355 aa19.66■□□□□ 0.74
LMX1A-204ENST00000489443 VIL1P09327 827 aaKnown RBP19.66■□□□□ 0.74
LMX1A-204ENST00000489443 HSPA6P17066 643 aa19.66■□□□□ 0.74
LMX1A-204ENST00000489443 PTPN12Q05209 780 aaKnown RBP19.66■□□□□ 0.74
LMX1A-204ENST00000489443 PANK1Q8TE04 598 aa19.66■□□□□ 0.74
LMX1A-204ENST00000489443 FBXW7Q969H0 707 aa19.66■□□□□ 0.74
LMX1A-204ENST00000489443 CNOT7Q9UIV1 285 aaKnown RBP19.66■□□□□ 0.74
LMX1A-204ENST00000489443 SHTN1A0MZ66 631 aa19.65■□□□□ 0.74
LMX1A-204ENST00000489443 USP17L3A6NCW0 530 aa19.65■□□□□ 0.74
LMX1A-204ENST00000489443 USP17L4A6NCW7 530 aa19.65■□□□□ 0.74
LMX1A-204ENST00000489443 USP17L1Q7RTZ2 530 aa19.65■□□□□ 0.74
LMX1A-204ENST00000489443 SIL1Q9H173 461 aa19.65■□□□□ 0.74
LMX1A-204ENST00000489443 ADARB2Q9NS39 739 aaKnown RBP19.65■□□□□ 0.74
LMX1A-204ENST00000489443 H7C1D1 291 aa19.64■□□□□ 0.73
LMX1A-204ENST00000489443 EYA2O00167 538 aa19.64■□□□□ 0.73
LMX1A-204ENST00000489443 RPS12P25398 132 aaKnown RBP19.64■□□□□ 0.73
LMX1A-204ENST00000489443 UBE4AQ14139 1066 aa19.64■□□□□ 0.73
LMX1A-204ENST00000489443 C15orf52Q6ZUT6 534 aaKnown RBP19.64■□□□□ 0.73
LMX1A-204ENST00000489443 USP50Q70EL3 339 aaPredicted RBP19.64■□□□□ 0.73
LMX1A-204ENST00000489443 MICALL2Q8IY33 904 aa19.64■□□□□ 0.73
LMX1A-204ENST00000489443 DPF2Q92785 391 aa19.64■□□□□ 0.73
LMX1A-204ENST00000489443 PSME4Q14997 1843 aa19.63■□□□□ 0.73
LMX1A-204ENST00000489443 IRS2Q9Y4H2 1338 aa19.63■□□□□ 0.73
LMX1A-204ENST00000489443 SRGAP3O43295 1099 aa19.63■□□□□ 0.73
LMX1A-204ENST00000489443 MS4A1P11836 297 aa19.63■□□□□ 0.73
LMX1A-204ENST00000489443 RSBN1LQ6PCB5 846 aaPredicted RBP19.63■□□□□ 0.73
LMX1A-204ENST00000489443 ZNF804AQ7Z570 1209 aa19.63■□□□□ 0.73
LMX1A-204ENST00000489443 CD209Q9NNX6 404 aa19.63■□□□□ 0.73
LMX1A-204ENST00000489443 PA2G4Q9UQ80 394 aaKnown RBP19.63■□□□□ 0.73
LMX1A-204ENST00000489443 PDE8BO95263 885 aa19.62■□□□□ 0.73
LMX1A-204ENST00000489443 MAP1SQ66K74 1059 aaPredicted RBP19.61■□□□□ 0.73
LMX1A-204ENST00000489443 TTLL5Q6EMB2 1281 aa19.61■□□□□ 0.73
LMX1A-204ENST00000489443 ATG9AQ7Z3C6 839 aa19.61■□□□□ 0.73
LMX1A-204ENST00000489443 VGLL2Q8N8G2 317 aa19.61■□□□□ 0.73
LMX1A-204ENST00000489443 MXD3Q9BW11 206 aa19.61■□□□□ 0.73
LMX1A-204ENST00000489443 ZBTB7BO15156 539 aaPredicted RBP19.6■□□□□ 0.73
LMX1A-204ENST00000489443 GYG1P46976 350 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 GTF2IP78347 998 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 MTX1Q13505 466 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 TBC1D10BQ4KMP7 808 aaPredicted RBP19.6■□□□□ 0.73
LMX1A-204ENST00000489443 DACT2Q5SW24 774 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 RBM26Q5T8P6 1007 aaKnown RBP19.6■□□□□ 0.73
LMX1A-204ENST00000489443 STRIP1Q5VSL9 837 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 SAMD7Q7Z3H4 446 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 AGBL3Q8NEM8 1001 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 TRPM4Q8TD43 1214 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 C1orf115Q9H7X2 142 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 COPRSQ9NQ92 184 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 ADAMTSL1Q8N6G6 1762 aa19.6■□□□□ 0.73
LMX1A-204ENST00000489443 CIAO1O76071 339 aa19.59■□□□□ 0.73
LMX1A-204ENST00000489443 HIBADHP31937 336 aaKnown RBP19.59■□□□□ 0.73
LMX1A-204ENST00000489443 APLP1P51693 650 aa19.59■□□□□ 0.73
LMX1A-204ENST00000489443 CNTROBQ8N137 903 aa19.59■□□□□ 0.73
LMX1A-204ENST00000489443 FAM84BQ96KN1 310 aaPredicted RBP19.59■□□□□ 0.73
LMX1A-204ENST00000489443 GMLQ99445 158 aa19.59■□□□□ 0.73
LMX1A-204ENST00000489443 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
LMX1A-204ENST00000489443 IL1R1P14778 569 aa19.58■□□□□ 0.72
LMX1A-204ENST00000489443 IL15P40933 162 aaPredicted RBP19.58■□□□□ 0.72
LMX1A-204ENST00000489443 HIRAP54198 1017 aaPredicted RBP19.58■□□□□ 0.72
LMX1A-204ENST00000489443 PUM3Q15397 648 aaKnown RBP19.58■□□□□ 0.72
LMX1A-204ENST00000489443 VPS37DQ86XT2 251 aa19.58■□□□□ 0.72
LMX1A-204ENST00000489443 CEP126Q9P2H0 1117 aa19.58■□□□□ 0.72
LMX1A-204ENST00000489443 PNMA6EA0A0J9YXQ4 647 aa19.57■□□□□ 0.72
LMX1A-204ENST00000489443 EGFRP00533 1210 aa19.57■□□□□ 0.72
LMX1A-204ENST00000489443 IFIT1P09914 478 aaKnown RBP19.57■□□□□ 0.72
LMX1A-204ENST00000489443 USP17L8P0C7I0 530 aa19.57■□□□□ 0.72
LMX1A-204ENST00000489443 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.57■□□□□ 0.72
LMX1A-204ENST00000489443 JAG2Q9Y219 1238 aa19.57■□□□□ 0.72
LMX1A-204ENST00000489443 COG6Q9Y2V7 657 aa19.57■□□□□ 0.72
LMX1A-204ENST00000489443 ITGBL1O95965 494 aaPredicted RBP19.56■□□□□ 0.72
LMX1A-204ENST00000489443 HTRA3P83110 453 aa19.56■□□□□ 0.72
LMX1A-204ENST00000489443 CAVIN4Q5BKX8 364 aa19.56■□□□□ 0.72
LMX1A-204ENST00000489443 ZNF646O15015 1829 aaPredicted RBP19.55■□□□□ 0.72
LMX1A-204ENST00000489443 MYO3BQ8WXR4 1341 aa19.55■□□□□ 0.72
LMX1A-204ENST00000489443 SLC5A1P13866 664 aa19.55■□□□□ 0.72
LMX1A-204ENST00000489443 FGFR2P21802 821 aa19.55■□□□□ 0.72
LMX1A-204ENST00000489443 ZNF280AP59817 542 aaPredicted RBP19.55■□□□□ 0.72
LMX1A-204ENST00000489443 ATP8B2P98198 1209 aa19.55■□□□□ 0.72
LMX1A-204ENST00000489443 MVPQ14764 893 aaKnown RBP19.55■□□□□ 0.72
LMX1A-204ENST00000489443 FBXO33Q7Z6M2 555 aa19.55■□□□□ 0.72
LMX1A-204ENST00000489443 TDRD7Q8NHU6 1098 aaKnown RBP19.55■□□□□ 0.72
LMX1A-204ENST00000489443 LPIN2Q92539 896 aa19.55■□□□□ 0.72
LMX1A-204ENST00000489443 IQSEC3Q9UPP2 1182 aaPredicted RBP19.55■□□□□ 0.72
LMX1A-204ENST00000489443 ZNF609O15014 1411 aa19.54■□□□□ 0.72
LMX1A-204ENST00000489443 FRAT2O75474 233 aaPredicted RBP19.54■□□□□ 0.72
LMX1A-204ENST00000489443 SASH1O94885 1247 aa19.54■□□□□ 0.72
LMX1A-204ENST00000489443 BCAMP50895 628 aa19.54■□□□□ 0.72
LMX1A-204ENST00000489443 ATP2B3Q16720 1220 aa19.54■□□□□ 0.72
LMX1A-204ENST00000489443 KIF4BQ2VIQ3 1234 aa19.54■□□□□ 0.72
LMX1A-204ENST00000489443 KIAA0825Q8IV33 1275 aa19.54■□□□□ 0.72
LMX1A-204ENST00000489443 OGFOD1Q8N543 542 aa19.54■□□□□ 0.72
LMX1A-204ENST00000489443 ZC3H15Q8WU90 426 aaKnown RBP19.54■□□□□ 0.72
LMX1A-204ENST00000489443 POLR2AP24928 1970 aaKnown RBP19.53■□□□□ 0.72
LMX1A-204ENST00000489443 PASKQ96RG2 1323 aa19.53■□□□□ 0.72
LMX1A-204ENST00000489443 G3BP1Q13283 466 aaKnown RBP eCLIP19.53■□□□□ 0.72
LMX1A-204ENST00000489443 C20orf194Q5TEA3 1177 aa19.53■□□□□ 0.72
LMX1A-204ENST00000489443 MYOZ2Q9NPC6 264 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms