RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 TMEM132AQ24JP5 1023 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 LARP1BQ659C4 914 aaKnown RBP10.47□□□□□ -0.73
CSMD2-209ENST00000489419 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
CSMD2-209ENST00000489419 ZNF34Q8IZ26 560 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 FBXL16Q8N461 479 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 CTNNA3Q9UI47 895 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 NDUFB9Q9Y6M9 179 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 SPATA31A1Q5TZJ5 1347 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 ANKRD36CQ5JPF3 1778 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
CSMD2-209ENST00000489419 CCDC129Q6ZRS4 1044 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 NECAB1Q8N987 351 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 CHAMP1Q96JM3 812 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 LLPHQ9BRT6 129 aaKnown RBP10.47□□□□□ -0.73
CSMD2-209ENST00000489419 RBM27Q9P2N5 1060 aaKnown RBP10.47□□□□□ -0.73
CSMD2-209ENST00000489419 NSFL1CQ9UNZ2 370 aaKnown RBP10.47□□□□□ -0.73
CSMD2-209ENST00000489419 TAF6LQ9Y6J9 622 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 IRS4O14654 1257 aaPredicted RBP10.46□□□□□ -0.73
CSMD2-209ENST00000489419 HSPD1P10809 573 aaKnown RBP10.46□□□□□ -0.73
CSMD2-209ENST00000489419 LDHAL6AQ6ZMR3 332 aa10.46□□□□□ -0.73
CSMD2-209ENST00000489419 GTF3C6Q969F1 213 aa10.46□□□□□ -0.73
CSMD2-209ENST00000489419 AGXT2Q9BYV1 514 aa10.46□□□□□ -0.73
CSMD2-209ENST00000489419 ZBTB1Q9Y2K1 713 aa10.46□□□□□ -0.73
CSMD2-209ENST00000489419 ITGA6P23229 1130 aa10.46□□□□□ -0.74
CSMD2-209ENST00000489419 EIF5P55010 431 aaKnown RBP10.46□□□□□ -0.74
CSMD2-209ENST00000489419 DDB1Q16531 1140 aa10.46□□□□□ -0.74
CSMD2-209ENST00000489419 ATP2B3Q16720 1220 aa10.46□□□□□ -0.74
CSMD2-209ENST00000489419 ZSCAN25Q6NSZ9 544 aa10.46□□□□□ -0.74
CSMD2-209ENST00000489419 DZIP3Q86Y13 1208 aaKnown RBP10.46□□□□□ -0.74
CSMD2-209ENST00000489419 TRIM44Q96DX7 344 aaPredicted RBP10.46□□□□□ -0.74
CSMD2-209ENST00000489419 TRMT112Q9UI30 125 aaKnown RBP10.46□□□□□ -0.74
CSMD2-209ENST00000489419 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.74
CSMD2-209ENST00000489419 MAST3O60307 1309 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 GADD45BO75293 160 aaPredicted RBP10.45□□□□□ -0.74
CSMD2-209ENST00000489419 TPM2P07951 284 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 FAM193AP78312 1265 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 EXOSC10Q01780 885 aaKnown RBP10.45□□□□□ -0.74
CSMD2-209ENST00000489419 HS1BP3Q53T59 392 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 METTL24Q5JXM2 366 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 CCDC183Q5T5S1 534 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 Q6ZUG5 572 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 RBSNQ9H1K0 784 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 ELP1O95163 1332 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 SYCE3A1L190 88 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 CLGNO14967 610 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 PFKFB2O60825 505 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 GPTP24298 496 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 FKBP4Q02790 459 aaKnown RBP eCLIP10.45□□□□□ -0.74
CSMD2-209ENST00000489419 TTF1Q15361 905 aaPredicted RBP10.45□□□□□ -0.74
CSMD2-209ENST00000489419 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 APPBP2Q92624 585 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.45□□□□□ -0.74
CSMD2-209ENST00000489419 GREM2Q9H772 168 aa10.45□□□□□ -0.74
CSMD2-209ENST00000489419 CICQ96RK0 1608 aaPredicted RBP10.45□□□□□ -0.74
CSMD2-209ENST00000489419 RIC1Q4ADV7 1423 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 ADORA1P30542 326 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 KRT85P78386 507 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 VGLL2Q8N8G2 317 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 FAM184AQ8NB25 1140 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 SYTL4Q96C24 671 aaPredicted RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 TSPY26PQ9H489 355 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 CCDC87Q9NVE4 849 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 KIF3AQ9Y496 699 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 NUP98P52948 1817 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 MROH5Q6ZUA9 1318 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 LTBP4Q8N2S1 1624 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 VPS37CA5D8V6 355 aaPredicted RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 PDE8BO95263 885 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 CHGBP05060 677 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 UQCRFS1P1P0C7P4 283 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 COL9A3Q14050 684 aaPredicted RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 PARP10Q53GL7 1025 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 INTS5Q6P9B9 1019 aaKnown RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 SMARCC2Q8TAQ2 1214 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 SMARCC1Q92922 1105 aaPredicted RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 OSBP2Q969R2 916 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 ZNF274Q96GC6 653 aaPredicted RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 SCAND2PQ9GZW5 306 aaPredicted RBP10.44□□□□□ -0.74
CSMD2-209ENST00000489419 GDPD2Q9HCC8 539 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 CNNM1Q9NRU3 951 aa10.44□□□□□ -0.74
CSMD2-209ENST00000489419 NRAPQ86VF7 1730 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 MYH3P11055 1940 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 SPATA31A5Q5VU36 1347 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 SPATA31A7Q8IWB4 1347 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 E7EWF7 191 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 EVCP57679 992 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 HMGN5P82970 282 aaKnown RBP10.43□□□□□ -0.74
CSMD2-209ENST00000489419 DNM1Q05193 864 aaKnown RBP10.43□□□□□ -0.74
CSMD2-209ENST00000489419 UVSSAQ2YD98 709 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 STOX1Q6ZVD7 989 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 PDLIM2Q96JY6 352 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 TCEANC2Q96MN5 208 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 DOT1LQ8TEK3 1739 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 RGL2O15211 777 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 FOXD4L6Q3SYB3 417 aaPredicted RBP10.43□□□□□ -0.74
CSMD2-209ENST00000489419 FOXD4L3Q6VB84 417 aaPredicted RBP10.43□□□□□ -0.74
CSMD2-209ENST00000489419 SYNE4Q8N205 404 aa10.43□□□□□ -0.74
CSMD2-209ENST00000489419 ZSCAN16Q9H4T2 348 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms