RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 GLYCTKQ8IVS8 523 aa7.33□□□□□ -1.24
XRN1-213ENST00000489241 DZIP1LQ8IYY4 767 aaKnown RBP7.33□□□□□ -1.24
XRN1-213ENST00000489241 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
XRN1-213ENST00000489241 ZFP64Q9NPA5 681 aa7.33□□□□□ -1.24
XRN1-213ENST00000489241 SOWAHDA6NJG2 315 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 CYP2E1P05181 493 aaPredicted RBP7.32□□□□□ -1.24
XRN1-213ENST00000489241 CDC27P30260 824 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 ZNF211Q13398 564 aaPredicted RBP7.32□□□□□ -1.24
XRN1-213ENST00000489241 LRP8Q14114 963 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 ALKBH2Q6NS38 261 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 PRR23CQ6ZRP0 262 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 Q6ZS46 218 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 NCAPG2Q86XI2 1143 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 LACRTQ9GZZ8 138 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 ELP3Q9H9T3 547 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 ANO2Q9NQ90 1003 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 TMEM63CQ9P1W3 806 aa7.32□□□□□ -1.24
XRN1-213ENST00000489241 H3BRB1 525 aa7.31□□□□□ -1.24
XRN1-213ENST00000489241 ALX3O95076 343 aa7.31□□□□□ -1.24
XRN1-213ENST00000489241 PCSK2P16519 638 aa7.31□□□□□ -1.24
XRN1-213ENST00000489241 NOM1Q5C9Z4 860 aaKnown RBP7.31□□□□□ -1.24
XRN1-213ENST00000489241 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.31□□□□□ -1.24
XRN1-213ENST00000489241 EDEM1Q92611 657 aa7.31□□□□□ -1.24
XRN1-213ENST00000489241 PBX4Q9BYU1 374 aa7.31□□□□□ -1.24
XRN1-213ENST00000489241 TUT1Q9H6E5 874 aaKnown RBP7.31□□□□□ -1.24
XRN1-213ENST00000489241 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
XRN1-213ENST00000489241 LINC01387J3KSC0 135 aa7.3□□□□□ -1.24
XRN1-213ENST00000489241 NPR3P17342 541 aa7.3□□□□□ -1.24
XRN1-213ENST00000489241 AAMPQ13685 434 aa7.3□□□□□ -1.24
XRN1-213ENST00000489241 TXNDC11Q6PKC3 985 aa7.3□□□□□ -1.24
XRN1-213ENST00000489241 CEP120Q8N960 986 aa7.3□□□□□ -1.24
XRN1-213ENST00000489241 GALNT11Q8NCW6 608 aa7.3□□□□□ -1.24
XRN1-213ENST00000489241 KANSL3Q9P2N6 904 aa7.3□□□□□ -1.24
XRN1-213ENST00000489241 FAM177BA6PVY3 158 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 PDGFAP04085 211 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 GLB1P16278 677 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 PTPRAP18433 802 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 MPSTP25325 297 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 CD68P34810 354 aaPredicted RBP7.29□□□□□ -1.24
XRN1-213ENST00000489241 DNM1Q05193 864 aaKnown RBP7.29□□□□□ -1.24
XRN1-213ENST00000489241 MTMR3Q13615 1198 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 FAM117BQ6P1L5 589 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 XKR5Q6UX68 686 aa7.29□□□□□ -1.24
XRN1-213ENST00000489241 AGGF1Q8N302 714 aaeCLIP7.29□□□□□ -1.24
XRN1-213ENST00000489241 EPHA1P21709 976 aa7.28□□□□□ -1.24
XRN1-213ENST00000489241 MZF1P28698 734 aaPredicted RBP7.28□□□□□ -1.24
XRN1-213ENST00000489241 EIF1AXP47813 144 aaKnown RBP7.28□□□□□ -1.24
XRN1-213ENST00000489241 RBM25P49756 843 aaKnown RBP7.28□□□□□ -1.24
XRN1-213ENST00000489241 ADAMTSL4Q6UY14 1074 aa7.28□□□□□ -1.24
XRN1-213ENST00000489241 KLHL23Q8NBE8 558 aa7.28□□□□□ -1.24
XRN1-213ENST00000489241 TTC16Q8NEE8 873 aa7.28□□□□□ -1.24
XRN1-213ENST00000489241 ADAM19Q9H013 955 aa7.28□□□□□ -1.24
XRN1-213ENST00000489241 CNTN3Q9P232 1028 aa7.28□□□□□ -1.24
XRN1-213ENST00000489241 TM4SF5O14894 197 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 FSCN2O14926 492 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 WISP1O95388 367 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 CES1P23141 567 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 ACAD11Q709F0 780 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 CARD10Q9BWT7 1032 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 SALL4Q9UJQ4 1053 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 RNF112Q9ULX5 631 aa7.27□□□□□ -1.25
XRN1-213ENST00000489241 H3BRJ5 948 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 FSTP19883 344 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 CDC25BP30305 580 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 C8orf34Q49A92 452 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 NBPF11Q86T75 865 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 SLC51AQ86UW1 340 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 C1orf127Q8N9H9 656 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 POP1Q99575 1024 aaKnown RBP7.26□□□□□ -1.25
XRN1-213ENST00000489241 CEP41Q9BYV8 373 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 GGNBP2Q9H3C7 697 aa7.26□□□□□ -1.25
XRN1-213ENST00000489241 SH2B1Q9NRF2 756 aaPredicted RBP7.26□□□□□ -1.25
XRN1-213ENST00000489241 A6NHS1 94 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 CABP4P57796 275 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 WNT8BQ93098 351 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 PMEPA1Q969W9 287 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 SEC31BQ9NQW1 1179 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 KCNK4Q9NYG8 393 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 BRPF3Q9ULD4 1205 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 AMOTL2Q9Y2J4 779 aa7.25□□□□□ -1.25
XRN1-213ENST00000489241 NFKBIEO00221 500 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 NDUFB5O43674 189 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 HYAL3O43820 417 aaPredicted RBP7.24□□□□□ -1.25
XRN1-213ENST00000489241 ACPPP15309 386 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 PIP4K2BP78356 416 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 UVSSAQ2YD98 709 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 UBL7Q96S82 380 aaPredicted RBP7.24□□□□□ -1.25
XRN1-213ENST00000489241 CHRDQ9H2X0 955 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 DZANK1Q9NVP4 752 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 POLIQ9UNA4 740 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 RAXQ9Y2V3 346 aa7.24□□□□□ -1.25
XRN1-213ENST00000489241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.24□□□□□ -1.25
XRN1-213ENST00000489241 PDE2AO00408 941 aaPredicted RBP7.23□□□□□ -1.25
XRN1-213ENST00000489241 GSC2O15499 205 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 ADAM11O75078 769 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 USP5P45974 858 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 ARHGAP4P98171 946 aa7.23□□□□□ -1.25
XRN1-213ENST00000489241 ECM1Q16610 540 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms