RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 FRAT2O75474 233 aaPredicted RBP12.26□□□□□ -0.45
PDPN-206ENST00000488631 EPHX2P34913 555 aa12.26□□□□□ -0.45
PDPN-206ENST00000488631 GMPSP49915 693 aaPredicted RBP12.26□□□□□ -0.45
PDPN-206ENST00000488631 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
PDPN-206ENST00000488631 SMC1BQ8NDV3 1235 aa12.26□□□□□ -0.45
PDPN-206ENST00000488631 KLHDC4Q8TBB5 520 aa12.26□□□□□ -0.45
PDPN-206ENST00000488631 SRGAP3O43295 1099 aa12.25□□□□□ -0.45
PDPN-206ENST00000488631 OS9Q13438 667 aaPredicted RBP12.25□□□□□ -0.45
PDPN-206ENST00000488631 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
PDPN-206ENST00000488631 ZNF804AQ7Z570 1209 aa12.25□□□□□ -0.45
PDPN-206ENST00000488631 PNMA8AQ86V59 439 aaPredicted RBP12.25□□□□□ -0.45
PDPN-206ENST00000488631 PANK1Q8TE04 598 aa12.25□□□□□ -0.45
PDPN-206ENST00000488631 KAZALD1Q96I82 304 aa12.25□□□□□ -0.45
PDPN-206ENST00000488631 PUS3Q9BZE2 481 aaKnown RBP12.25□□□□□ -0.45
PDPN-206ENST00000488631 MROH5Q6ZUA9 1318 aa12.25□□□□□ -0.45
PDPN-206ENST00000488631 LAMB2P55268 1798 aa12.25□□□□□ -0.45
PDPN-206ENST00000488631 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
PDPN-206ENST00000488631 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
PDPN-206ENST00000488631 PSMD14O00487 310 aa12.24□□□□□ -0.45
PDPN-206ENST00000488631 RABL6Q3YEC7 729 aaPredicted RBP12.24□□□□□ -0.45
PDPN-206ENST00000488631 LRRC24Q50LG9 513 aa12.24□□□□□ -0.45
PDPN-206ENST00000488631 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
PDPN-206ENST00000488631 TAF1DQ9H5J8 278 aaPredicted RBP12.24□□□□□ -0.45
PDPN-206ENST00000488631 USP17L3A6NCW0 530 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 USP17L4A6NCW7 530 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 SNAP23O00161 211 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 EPS15P42566 896 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 USP17L1Q7RTZ2 530 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 PODNQ7Z5L7 613 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 L3MBTL3Q96JM7 780 aaPredicted RBP12.23□□□□□ -0.45
PDPN-206ENST00000488631 COA1Q9GZY4 146 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 BCL11AQ9H165 835 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 C1orf115Q9H7X2 142 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 KCNQ5Q9NR82 932 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
PDPN-206ENST00000488631 TAF1P21675 1872 aa12.23□□□□□ -0.45
PDPN-206ENST00000488631 SNED1Q8TER0 1413 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 MED23Q9ULK4 1368 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 EYA2O00167 538 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
PDPN-206ENST00000488631 KLRK1P26718 216 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 FSTL1Q12841 308 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 G3BP1Q13283 466 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDPN-206ENST00000488631 CAVIN4Q5BKX8 364 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 GPRC5DQ9NZD1 345 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 CEP126Q9P2H0 1117 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 COG6Q9Y2V7 657 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 TIAM2Q8IVF5 1701 aa12.22□□□□□ -0.45
PDPN-206ENST00000488631 SBF1O95248 1867 aa12.21□□□□□ -0.45
PDPN-206ENST00000488631 POTECB2RU33 542 aa12.21□□□□□ -0.45
PDPN-206ENST00000488631 GTF2IP78347 998 aa12.21□□□□□ -0.45
PDPN-206ENST00000488631 LDHDQ86WU2 507 aa12.21□□□□□ -0.45
PDPN-206ENST00000488631 OGFOD1Q8N543 542 aa12.21□□□□□ -0.45
PDPN-206ENST00000488631 CHMP4BQ9H444 224 aaKnown RBP12.21□□□□□ -0.45
PDPN-206ENST00000488631 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
PDPN-206ENST00000488631 PA2G4Q9UQ80 394 aaKnown RBP12.21□□□□□ -0.45
PDPN-206ENST00000488631 JAG2Q9Y219 1238 aa12.21□□□□□ -0.45
PDPN-206ENST00000488631 COL4A1P02462 1669 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 RLBP1P12271 317 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 SLC5A1P13866 664 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 RPS12P25398 132 aaKnown RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 HIBADHP31937 336 aaKnown RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 IL15P40933 162 aaPredicted RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 GYG1P46976 350 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 SCNN1DP51172 638 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 CHAF1AQ13111 956 aaPredicted RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 UBE4AQ14139 1066 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 PUM3Q15397 648 aaKnown RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 TBC1D10BQ4KMP7 808 aaPredicted RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 GORABQ5T7V8 394 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 RSBN1LQ6PCB5 846 aaPredicted RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
PDPN-206ENST00000488631 TXNRD3Q86VQ6 643 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 CD209Q9NNX6 404 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 RIPOR2Q9Y4F9 1068 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 CCDC88AQ3V6T2 1871 aa12.2□□□□□ -0.46
PDPN-206ENST00000488631 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
PDPN-206ENST00000488631 PDE8BO95263 885 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 USP17L8P0C7I0 530 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
PDPN-206ENST00000488631 MAP1SQ66K74 1059 aaPredicted RBP12.19□□□□□ -0.46
PDPN-206ENST00000488631 NEUROD6Q96NK8 337 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 DDX19BQ9UMR2 479 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 IQSEC3Q9UPP2 1182 aaPredicted RBP12.19□□□□□ -0.46
PDPN-206ENST00000488631 COL4A5P29400 1685 aa12.19□□□□□ -0.46
PDPN-206ENST00000488631 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
PDPN-206ENST00000488631 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
PDPN-206ENST00000488631 HSPA6P17066 643 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
PDPN-206ENST00000488631 RBM5P52756 815 aaKnown RBP eCLIP12.18□□□□□ -0.46
PDPN-206ENST00000488631 MVPQ14764 893 aaKnown RBP12.18□□□□□ -0.46
PDPN-206ENST00000488631 ATP2B3Q16720 1220 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
PDPN-206ENST00000488631 SAMD7Q7Z3H4 446 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms