RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 IGLV1-40P01703 118 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 CDC27P30260 824 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 TMEM164Q5U3C3 297 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 ACAD11Q709F0 780 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 SH2B1Q9NRF2 756 aaPredicted RBP6.3□□□□□ -1.4
CD46-215ENST00000488596 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 STIM2Q9P246 746 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 SLAIN2Q9P270 581 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 STOML1Q9UBI4 398 aa6.3□□□□□ -1.4
CD46-215ENST00000488596 FNDC3AQ9Y2H6 1198 aaKnown RBP6.3□□□□□ -1.4
CD46-215ENST00000488596 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.3□□□□□ -1.4
CD46-215ENST00000488596 FSCN2O14926 492 aa6.29□□□□□ -1.4
CD46-215ENST00000488596 DDX3YO15523 660 aaKnown RBP6.29□□□□□ -1.4
CD46-215ENST00000488596 PTCD1O75127 700 aaKnown RBP6.29□□□□□ -1.4
CD46-215ENST00000488596 TGFB1P01137 390 aa6.29□□□□□ -1.4
CD46-215ENST00000488596 EPHA1P21709 976 aa6.29□□□□□ -1.4
CD46-215ENST00000488596 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
CD46-215ENST00000488596 CEP120Q8N960 986 aa6.29□□□□□ -1.4
CD46-215ENST00000488596 POP1Q99575 1024 aaKnown RBP6.29□□□□□ -1.4
CD46-215ENST00000488596 PBX4Q9BYU1 374 aa6.29□□□□□ -1.4
CD46-215ENST00000488596 ABI2Q9NYB9 513 aaPredicted RBP6.29□□□□□ -1.4
CD46-215ENST00000488596 ARID1BQ8NFD5 2236 aaPredicted RBP6.28□□□□□ -1.4
CD46-215ENST00000488596 KIAA1324LA8MWY0 1029 aaPredicted RBP6.28□□□□□ -1.4
CD46-215ENST00000488596 DHX15O43143 795 aaKnown RBP6.28□□□□□ -1.4
CD46-215ENST00000488596 ATG7O95352 703 aa6.28□□□□□ -1.4
CD46-215ENST00000488596 TMEM63CQ9P1W3 806 aa6.28□□□□□ -1.4
CD46-215ENST00000488596 ADAM11O75078 769 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 ATCAYQ86WG3 371 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 NCAPG2Q86XI2 1143 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 ZDHHC13Q8IUH4 622 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 KLHL23Q8NBE8 558 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 FOXD4L4Q8WXT5 416 aaPredicted RBP6.27□□□□□ -1.41
CD46-215ENST00000488596 CLP1Q92989 425 aaKnown RBP6.27□□□□□ -1.41
CD46-215ENST00000488596 CCDC97Q96F63 343 aaPredicted RBP6.27□□□□□ -1.41
CD46-215ENST00000488596 KLHDC7BQ96G42 594 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 FAM46AQ96IP4 442 aaKnown RBP6.27□□□□□ -1.41
CD46-215ENST00000488596 ELP3Q9H9T3 547 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 CNTN3Q9P232 1028 aa6.27□□□□□ -1.41
CD46-215ENST00000488596 OAS3Q9Y6K5 1087 aaKnown RBP6.27□□□□□ -1.41
CD46-215ENST00000488596 HMX2A2RU54 273 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 GSC2O15499 205 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 ACPPP15309 386 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 GP2P55259 537 aaKnown RBP6.26□□□□□ -1.41
CD46-215ENST00000488596 NFIAQ12857 509 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 DUOXA2Q1HG44 320 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 TRIM42Q8IWZ5 723 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 ABTB2Q8N961 1025 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 UBASH3BQ8TF42 649 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 UTP4Q969X6 686 aaKnown RBP6.26□□□□□ -1.41
CD46-215ENST00000488596 NUDT16Q96DE0 195 aaKnown RBP6.26□□□□□ -1.41
CD46-215ENST00000488596 CEP41Q9BYV8 373 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 ADAM19Q9H013 955 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 KANSL3Q9P2N6 904 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 SEPT3Q9UH03 358 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 SERPINA10Q9UK55 444 aa6.26□□□□□ -1.41
CD46-215ENST00000488596 NFKBIEO00221 500 aa6.25□□□□□ -1.41
CD46-215ENST00000488596 ADAMTS4O75173 837 aa6.25□□□□□ -1.41
CD46-215ENST00000488596 UVSSAQ2YD98 709 aa6.25□□□□□ -1.41
CD46-215ENST00000488596 FAM117BQ6P1L5 589 aa6.25□□□□□ -1.41
CD46-215ENST00000488596 SEC31BQ9NQW1 1179 aa6.25□□□□□ -1.41
CD46-215ENST00000488596 SALL4Q9UJQ4 1053 aa6.25□□□□□ -1.41
CD46-215ENST00000488596 TRPA1O75762 1119 aa6.24□□□□□ -1.41
CD46-215ENST00000488596 PTPRAP18433 802 aa6.24□□□□□ -1.41
CD46-215ENST00000488596 PDE12Q6L8Q7 609 aaKnown RBP6.24□□□□□ -1.41
CD46-215ENST00000488596 ZNF438Q7Z4V0 828 aa6.24□□□□□ -1.41
CD46-215ENST00000488596 C1orf127Q8N9H9 656 aa6.24□□□□□ -1.41
CD46-215ENST00000488596 MYRFLQ96LU7 910 aa6.24□□□□□ -1.41
CD46-215ENST00000488596 KRTAP4-2Q9BYR5 136 aa6.24□□□□□ -1.41
CD46-215ENST00000488596 PRR19A6NJB7 356 aa6.23□□□□□ -1.41
CD46-215ENST00000488596 RNF43Q68DV7 783 aa6.23□□□□□ -1.41
CD46-215ENST00000488596 HHIPQ96QV1 700 aa6.23□□□□□ -1.41
CD46-215ENST00000488596 GGNBP2Q9H3C7 697 aa6.23□□□□□ -1.41
CD46-215ENST00000488596 A6NHS1 94 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 H3BRJ5 948 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 ATP2B4P23634 1241 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 HGSNATQ68CP4 663 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 XKR5Q6UX68 686 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 FAM20CQ8IXL6 584 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 EDEM1Q92611 657 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 FAM83CQ9BQN1 747 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 DZANK1Q9NVP4 752 aa6.22□□□□□ -1.41
CD46-215ENST00000488596 BMP3P12645 472 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 SPINK2P20155 84 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 CES1P23141 567 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 PREPP48147 710 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 NLRP12P59046 1061 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 PIP4K2BP78356 416 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 JAG1P78504 1218 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 CLEC10AQ8IUN9 316 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 DBNDD2Q9BQY9 259 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 CHRDQ9H2X0 955 aa6.21□□□□□ -1.42
CD46-215ENST00000488596 FAM177BA6PVY3 158 aa6.2□□□□□ -1.42
CD46-215ENST00000488596 SART1O43290 800 aaKnown RBP6.2□□□□□ -1.42
CD46-215ENST00000488596 DNM1Q05193 864 aaKnown RBP6.2□□□□□ -1.42
CD46-215ENST00000488596 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.2□□□□□ -1.42
CD46-215ENST00000488596 BEND4Q6ZU67 534 aa6.2□□□□□ -1.42
CD46-215ENST00000488596 SHKBP1Q8TBC3 707 aa6.2□□□□□ -1.42
CD46-215ENST00000488596 SLC7A3Q8WY07 619 aa6.2□□□□□ -1.42
CD46-215ENST00000488596 WNT8BQ93098 351 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms