RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 GTF2E1P29083 439 aaPredicted RBP14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 NUCB1Q02818 461 aa14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 TCIRG1Q13488 830 aa14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 CCDC191Q8NCU4 936 aa14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 CWC25Q9NXE8 425 aaPredicted RBP14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 COLQQ9Y215 455 aaPredicted RBP14.92□□□□□ -0.02
HLA-DOB-209ENST00000488325 ABCC12Q96J65 1359 aa14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 SHTN1A0MZ66 631 aa14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 RGS3P49796 1198 aa14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 TRIM28Q13263 835 aaKnown RBP14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 KRT26Q7Z3Y9 468 aa14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 REM2Q8IYK8 340 aaPredicted RBP14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 RPGRQ92834 1020 aaKnown RBP14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 CNOT7Q9UIV1 285 aaKnown RBP14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 TRIOBPQ9H2D6 2365 aa14.91□□□□□ -0.02
HLA-DOB-209ENST00000488325 POTEFA5A3E0 1075 aa14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 ATP5J2-PTCD1G3V325 749 aa14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 PPEF1O14829 653 aaPredicted RBP14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 HOXA10P31260 410 aaPredicted RBP14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 MTX1Q13505 466 aa14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 ANKRD45Q5TZF3 282 aa14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 GIGYF2Q6Y7W6 1299 aaKnown RBP14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 CHD1LQ86WJ1 897 aa14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 ISCA1Q9BUE6 129 aa14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 VPS33BQ9H267 617 aa14.9□□□□□ -0.02
HLA-DOB-209ENST00000488325 ADM5C9JUS6 153 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 H7C1D1 291 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 RAD17O75943 681 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 TBC1D8O95759 1140 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 POLA2Q14181 598 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 HSP90AB4PQ58FF6 505 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 SUCLG2Q96I99 432 aa14.89□□□□□ -0.03
HLA-DOB-209ENST00000488325 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 RGL2O15211 777 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 SRGAP3O43295 1099 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 TNIP1Q15025 636 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 PPP1R42Q7Z4L9 355 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 NUTM1Q86Y26 1132 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 RASAL3Q86YV0 1011 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 MICALL2Q8IY33 904 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 HTTP42858 3142 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 RIC1Q4ADV7 1423 aa14.88□□□□□ -0.03
HLA-DOB-209ENST00000488325 H7C1W4 665 aa14.87□□□□□ -0.03
HLA-DOB-209ENST00000488325 RAB11FIP3O75154 756 aa14.87□□□□□ -0.03
HLA-DOB-209ENST00000488325 CRAMP1Q96RY5 1269 aa14.87□□□□□ -0.03
HLA-DOB-209ENST00000488325 LNPKQ9C0E8 428 aa14.87□□□□□ -0.03
HLA-DOB-209ENST00000488325 GPR25O00155 361 aa14.86□□□□□ -0.03
HLA-DOB-209ENST00000488325 HLFQ16534 295 aa14.86□□□□□ -0.03
HLA-DOB-209ENST00000488325 SAMD7Q7Z3H4 446 aa14.86□□□□□ -0.03
HLA-DOB-209ENST00000488325 UBE3BQ7Z3V4 1068 aa14.86□□□□□ -0.03
HLA-DOB-209ENST00000488325 RBM17Q96I25 401 aaKnown RBP14.86□□□□□ -0.03
HLA-DOB-209ENST00000488325 BICC1Q9H694 974 aaKnown RBP14.86□□□□□ -0.03
HLA-DOB-209ENST00000488325 PCCAP05165 728 aaPredicted RBP14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 CASP7P55210 303 aa14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 TBC1D10BQ4KMP7 808 aaPredicted RBP14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 NOM1Q5C9Z4 860 aaKnown RBP14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 SKAP1Q86WV1 359 aa14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 SUPT20HQ8NEM7 779 aa14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 DCPSQ96C86 337 aaKnown RBP14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 NYXQ9GZU5 481 aa14.85□□□□□ -0.03
HLA-DOB-209ENST00000488325 POLR2AP24928 1970 aaKnown RBP14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 CEP290O15078 2479 aa14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 SURF6O75683 361 aaKnown RBP14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 EGFRP00533 1210 aa14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 PARP10Q53GL7 1025 aa14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 RTFDC1Q9BY42 306 aaPredicted RBP14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 TMX4Q9H1E5 349 aaPredicted RBP14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 ATP6V0A2Q9Y487 856 aa14.84□□□□□ -0.03
HLA-DOB-209ENST00000488325 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.03
HLA-DOB-209ENST00000488325 KIAA0100Q14667 2235 aaKnown RBP14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 PDE4AP27815 886 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 KIAA2012Q0VF49 1180 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 RABL6Q3YEC7 729 aaPredicted RBP14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 NLRP10Q86W26 655 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 ERC1Q8IUD2 1116 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 KIF1BPQ96EK5 621 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 KAZALD1Q96I82 304 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 LRRCC1Q9C099 1032 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 EXOC6BQ9Y2D4 811 aa14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 NOP58Q9Y2X3 529 aaKnown RBP14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
HLA-DOB-209ENST00000488325 CENPFP49454 3210 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 YDJCA8MPS7 323 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 FKTNO75072 461 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 HSP90B1P14625 803 aaKnown RBP14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 GPTP24298 496 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 OS9Q13438 667 aaPredicted RBP14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 ZNF34Q8IZ26 560 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 DPF2Q92785 391 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 PLA2G12BQ9BX93 195 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
HLA-DOB-209ENST00000488325 NUP98P52948 1817 aa14.81□□□□□ -0.04
HLA-DOB-209ENST00000488325 COL6A3P12111 3177 aa14.81□□□□□ -0.04
HLA-DOB-209ENST00000488325 G3BP1Q13283 466 aaKnown RBP eCLIP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms