RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 MED23Q9ULK4 1368 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 USP17L3A6NCW0 530 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 USP17L4A6NCW7 530 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 AOC2O75106 756 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 TAF5LO75529 589 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 KCNJ4P48050 445 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 CHRNDQ07001 517 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 LMBR1LQ6UX01 489 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 USP17L1Q7RTZ2 530 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 PODNQ7Z5L7 613 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 ZNF594Q96JF6 807 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 SCAF8Q9UPN6 1271 aaKnown RBP14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 ZNF804BA4D1E1 1349 aa14.34□□□□□ -0.11
NIPAL3-207ENST00000488155 GRM8O00222 908 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 PLIN1O60240 522 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 ECE1P42892 770 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 IFIT5Q13325 482 aaKnown RBP14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 SAPCD2Q86UD0 394 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 AGBL3Q8NEM8 1001 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 CDCA7LQ96GN5 454 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 SRCIN1Q9C0H9 1055 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 ANKRD2Q9GZV1 360 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 GGA3Q9NZ52 723 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 LEMD3Q9Y2U8 911 aa14.33□□□□□ -0.12
NIPAL3-207ENST00000488155 USP17L8P0C7I0 530 aa14.32□□□□□ -0.12
NIPAL3-207ENST00000488155 CTCFP49711 727 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-207ENST00000488155 LBX1P52954 281 aa14.32□□□□□ -0.12
NIPAL3-207ENST00000488155 SCARF1Q14162 830 aa14.32□□□□□ -0.12
NIPAL3-207ENST00000488155 TAF7LQ5H9L4 462 aa14.32□□□□□ -0.12
NIPAL3-207ENST00000488155 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
NIPAL3-207ENST00000488155 GMLQ99445 158 aa14.32□□□□□ -0.12
NIPAL3-207ENST00000488155 E9PSI1 815 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 ALDH1L1O75891 902 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 HUNKP57058 714 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 ZNF280AP59817 542 aaPredicted RBP14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 MAP2K1Q02750 393 aaPredicted RBP14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 CCDC57Q2TAC2 916 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 ANGEL2Q5VTE6 544 aaKnown RBP14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 COA1Q9GZY4 146 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 MYOZ2Q9NPC6 264 aa14.31□□□□□ -0.12
NIPAL3-207ENST00000488155 THSD7BQ9C0I4 1608 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 ECM29Q5VYK3 1845 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 GTF2IP78347 998 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 SLFN5Q08AF3 891 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 TTLL5Q6EMB2 1281 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 SSH1Q8WYL5 1049 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 SUCLG2Q96I99 432 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 TSKSQ9UJT2 592 aa14.3□□□□□ -0.12
NIPAL3-207ENST00000488155 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 HSPA8P11142 646 aaKnown RBP14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 NBPF9Q3BBW0 867 aa14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 LDHAL6AQ6ZMR3 332 aa14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 CDCA5Q96FF9 252 aa14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 BEGAINQ9BUH8 593 aa14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 GBA2Q9HCG7 927 aaPredicted RBP14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
NIPAL3-207ENST00000488155 STRIP1Q5VSL9 837 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 PRAMEF18Q5VWM3 479 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 KIAA0825Q8IV33 1275 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 C2orf69Q8N8R5 385 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 KAZALD1Q96I82 304 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 ZIC5Q96T25 663 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 CD209Q9NNX6 404 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 JAG2Q9Y219 1238 aa14.28□□□□□ -0.12
NIPAL3-207ENST00000488155 MYH13Q9UKX3 1938 aa14.27□□□□□ -0.12
NIPAL3-207ENST00000488155 ZNF609O15014 1411 aa14.27□□□□□ -0.12
NIPAL3-207ENST00000488155 SASH1O94885 1247 aa14.27□□□□□ -0.13
NIPAL3-207ENST00000488155 OGFOD1Q8N543 542 aa14.27□□□□□ -0.13
NIPAL3-207ENST00000488155 PUS3Q9BZE2 481 aaKnown RBP14.27□□□□□ -0.13
NIPAL3-207ENST00000488155 PRDM10Q9NQV6 1147 aa14.27□□□□□ -0.13
NIPAL3-207ENST00000488155 F8W031 263 aaPredicted RBP14.26□□□□□ -0.13
NIPAL3-207ENST00000488155 MAP2K2P36507 400 aa14.26□□□□□ -0.13
NIPAL3-207ENST00000488155 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
NIPAL3-207ENST00000488155 HHIPL1Q96JK4 782 aa14.26□□□□□ -0.13
NIPAL3-207ENST00000488155 BICC1Q9H694 974 aaKnown RBP14.26□□□□□ -0.13
NIPAL3-207ENST00000488155 MYO3BQ8WXR4 1341 aa14.25□□□□□ -0.13
NIPAL3-207ENST00000488155 IRS2Q9Y4H2 1338 aa14.25□□□□□ -0.13
NIPAL3-207ENST00000488155 WNT10BO00744 389 aa14.25□□□□□ -0.13
NIPAL3-207ENST00000488155 ZNF157P51786 506 aaPredicted RBP14.25□□□□□ -0.13
NIPAL3-207ENST00000488155 MOB2Q70IA6 237 aa14.25□□□□□ -0.13
NIPAL3-207ENST00000488155 SMC4Q9NTJ3 1288 aa14.25□□□□□ -0.13
NIPAL3-207ENST00000488155 PTPRCP08575 1304 aa14.24□□□□□ -0.13
NIPAL3-207ENST00000488155 ZNF804AQ7Z570 1209 aa14.24□□□□□ -0.13
NIPAL3-207ENST00000488155 CERS5Q8N5B7 392 aa14.24□□□□□ -0.13
NIPAL3-207ENST00000488155 KLHDC4Q8TBB5 520 aa14.24□□□□□ -0.13
NIPAL3-207ENST00000488155 HDAC9Q9UKV0 1011 aa14.24□□□□□ -0.13
NIPAL3-207ENST00000488155 AK9Q5TCS8 1911 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 CCER2I3L3R5 266 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 GYG1P46976 350 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 NOGQ13253 232 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 TTLL12Q14166 644 aaPredicted RBP14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 ANKRD44Q8N8A2 993 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 PCDHAC2Q9Y5I4 1007 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 PAPPA2Q9BXP8 1791 aa14.23□□□□□ -0.13
NIPAL3-207ENST00000488155 UTYO14607 1347 aa14.22□□□□□ -0.13
NIPAL3-207ENST00000488155 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms