RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 ZC3H6P61129 1189 aaKnown RBP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 ST5P78524 1137 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 FAM53CQ9NYF3 392 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 PTPDC1A2A3K4 754 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 ATP1A3P13637 1013 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 H2AFXP16104 143 aaPredicted RBP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 NDUFA8P51970 172 aa16.54■□□□□ 0.24
COL16A1-214ENST00000488128 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL16A1-214ENST00000488128 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
COL16A1-214ENST00000488128 ARHGEF25Q86VW2 580 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 UBXN4Q92575 508 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 CTDNEP1O95476 244 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 FAM160A1Q05DH4 1040 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 CALCOCO1Q9P1Z2 691 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 NFAT5O94916 1531 aa16.53■□□□□ 0.24
COL16A1-214ENST00000488128 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 CARD6Q9BX69 1037 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 RCOR1Q9UKL0 485 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 FANCGO15287 622 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 CYP2C19P33261 490 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 SF3A1Q15459 793 aaKnown RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 NSUN7Q8NE18 718 aaKnown RBP16.52■□□□□ 0.24
COL16A1-214ENST00000488128 ENGASEQ8NFI3 743 aa16.52■□□□□ 0.24
COL16A1-214ENST00000488128 HIP1O00291 1037 aa16.52■□□□□ 0.23
COL16A1-214ENST00000488128 CAVIN2O95810 425 aa16.52■□□□□ 0.23
COL16A1-214ENST00000488128 GNL2Q13823 731 aaKnown RBP16.52■□□□□ 0.23
COL16A1-214ENST00000488128 KLHL34Q8N239 644 aa16.52■□□□□ 0.23
COL16A1-214ENST00000488128 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.23
COL16A1-214ENST00000488128 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.23
COL16A1-214ENST00000488128 PXDNQ92626 1479 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 LTN1O94822 1766 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 MNS1Q8NEH6 495 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 ADGRL3Q9HAR2 1447 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 CTAGE5O15320 804 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
COL16A1-214ENST00000488128 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
COL16A1-214ENST00000488128 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
COL16A1-214ENST00000488128 GRM8O00222 908 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-214ENST00000488128 GSDMDP57764 484 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 ILDR1Q86SU0 546 aaPredicted RBP16.5■□□□□ 0.23
COL16A1-214ENST00000488128 NAT10Q9H0A0 1025 aaKnown RBP16.5■□□□□ 0.23
COL16A1-214ENST00000488128 ZSWIM4Q9H7M6 989 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 L2HGDHQ9H9P8 463 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 MYL6BP14649 208 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 SLC39A6Q13433 755 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 MTX1Q13505 466 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 EPHA10Q5JZY3 1008 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
COL16A1-214ENST00000488128 MED23Q9ULK4 1368 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 PROSER2Q86WR7 435 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 PDIA4P13667 645 aaKnown RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 RAD51AP2Q09MP3 1159 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 DPF2Q92785 391 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 SMARCE1Q969G3 411 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 DBNLQ9UJU6 430 aaKnown RBP16.49■□□□□ 0.23
COL16A1-214ENST00000488128 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
COL16A1-214ENST00000488128 HOXB7P09629 217 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 MRPS27Q92552 414 aaKnown RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 SASH3O75995 380 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 KSR2Q6VAB6 950 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 FMR1NBQ8N0W7 255 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 OSBPL5Q9H0X9 879 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 ETF1P62495 437 aaKnown RBP16.48■□□□□ 0.23
COL16A1-214ENST00000488128 STK38Q15208 465 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 KRBA2Q6ZNG9 492 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 KIAA1468Q9P260 1216 aa16.48■□□□□ 0.23
COL16A1-214ENST00000488128 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-214ENST00000488128 TFCP2Q12800 502 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 NLRP2Q9NX02 1062 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 RGPD2P0DJD1 1756 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
COL16A1-214ENST00000488128 EVCP57679 992 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 KRT32Q14532 448 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 KIF2AO00139 706 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 OAS2P29728 719 aaKnown RBP16.46■□□□□ 0.23
COL16A1-214ENST00000488128 CFAP100Q494V2 611 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 TTLL5Q6EMB2 1281 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 SMARCC2Q8TAQ2 1214 aa16.46■□□□□ 0.23
COL16A1-214ENST00000488128 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 TRIM66O15016 1216 aa16.45■□□□□ 0.22
COL16A1-214ENST00000488128 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms