RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 KRTAP1-3Q8IUG1 177 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 CEP120Q8N960 986 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 LPIN3Q9BQK8 851 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 EHD4Q9H223 541 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
ECHDC1-217ENST00000488087 M0R082 166 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 LILRB5O75023 590 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 TRPA1O75762 1119 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 ALBP02768 609 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 XPCQ01831 940 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 TAGLNQ01995 201 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 PEAR1Q5VY43 1037 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 PI16Q6UXB8 463 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 ZNF417Q8TAU3 575 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 ZNF587Q96SQ5 575 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 DUSP9Q99956 384 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 ZKSCAN3Q9BRR0 538 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 PBX4Q9BYU1 374 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 BCL11AQ9H165 835 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 DZANK1Q9NVP4 752 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 FRRS1LQ9P0K9 344 aa6.6□□□□□ -1.35
ECHDC1-217ENST00000488087 A0A1W2PP55 124 aa6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 FAM177BA6PVY3 158 aa6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 PDE2AO00408 941 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 GDF6Q6KF10 455 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 SCARF2Q96GP6 870 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 LIN7BQ9HAP6 207 aa6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 STARD13Q9Y3M8 1113 aa6.59□□□□□ -1.35
ECHDC1-217ENST00000488087 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
ECHDC1-217ENST00000488087 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
ECHDC1-217ENST00000488087 HHIPQ96QV1 700 aa6.58□□□□□ -1.36
ECHDC1-217ENST00000488087 LACRTQ9GZZ8 138 aa6.58□□□□□ -1.36
ECHDC1-217ENST00000488087 PARP2Q9UGN5 583 aa6.58□□□□□ -1.36
ECHDC1-217ENST00000488087 TRIM33Q9UPN9 1127 aa6.58□□□□□ -1.36
ECHDC1-217ENST00000488087 ADAM23O75077 832 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 ZNF16P17020 682 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 PTPRAP18433 802 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 PSMD2Q13200 908 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 GRM2Q14416 872 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 KIAA0319Q5VV43 1072 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 C20orf204Q6ZNR8 217 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 TMEM102Q8N9M5 508 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 BCO2Q9BYV7 579 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 SUV39H2Q9H5I1 410 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 MRS2Q9HD23 443 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 PPP4R2Q9NY27 417 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 TRAK1Q9UPV9 953 aa6.57□□□□□ -1.36
ECHDC1-217ENST00000488087 RBM47A0AV96 593 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 NFKBIEO00221 500 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 ARHGEF15O94989 841 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 GNA15P30679 374 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 AFF1P51825 1210 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 NXPE4Q6UWF7 544 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 TTC9Q92623 222 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 NXPE3Q969Y0 559 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 FAM161BQ96MY7 647 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 POP1Q99575 1024 aaKnown RBP6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 RNF19AQ9NV58 838 aa6.56□□□□□ -1.36
ECHDC1-217ENST00000488087 METTL12A8MUP2 240 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 MSTNO14793 375 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 GIPC1O14908 333 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 DGKGP49619 791 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 PODNQ7Z5L7 613 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 WFDC8Q8IUA0 241 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 CCNJLQ8IV13 435 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 FRMD6Q96NE9 622 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 TCF12Q99081 682 aa6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 BHLHE41Q9C0J9 482 aaPredicted RBP6.55□□□□□ -1.36
ECHDC1-217ENST00000488087 EIF4BP23588 611 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 CDC27P30260 824 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 CDC25BP30305 580 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 ITGAEP38570 1179 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 GRIA4P48058 902 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 FCGRTP55899 365 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 CABP4P57796 275 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 SNRPNP63162 240 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 DTHD1Q6ZMT9 781 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 CACTIN-AS1Q8N1I8 211 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 IL22RA1Q8N6P7 574 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 PRDM6Q9NQX0 595 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 MKL2Q9ULH7 1088 aa6.54□□□□□ -1.36
ECHDC1-217ENST00000488087 A0A096LPE4 126 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 A0A1W2PPZ6 126 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 PIK3R2O00459 728 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 SORBS3O60504 671 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 RBM25P49756 843 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 DAB2P98082 770 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 GRIK5Q16478 980 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 MSL1Q68DK7 614 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 TMC4Q7Z404 712 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 GLIS3Q8NEA6 775 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 BSNDQ8WZ55 320 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 OSBPL7Q9BZF2 842 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 SRCIN1Q9C0H9 1055 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 ABCB6Q9NP58 842 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 SH2B1Q9NRF2 756 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 VTI1BQ9UEU0 232 aa6.53□□□□□ -1.36
ECHDC1-217ENST00000488087 AK5Q9Y6K8 562 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms