RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 HELBQ8NG08 1087 aaPredicted RBP12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 XAGE2Q96GT9 111 aa12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 DBNDD2Q9BQY9 259 aa12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 TAF5LO75529 589 aa12.89□□□□□ -0.35
HLA-DMB-261ENST00000487996 ATP5JP18859 108 aa12.89□□□□□ -0.35
HLA-DMB-261ENST00000487996 ATP2B4P23634 1241 aa12.89□□□□□ -0.35
HLA-DMB-261ENST00000487996 CAVIN4Q5BKX8 364 aa12.89□□□□□ -0.35
HLA-DMB-261ENST00000487996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
HLA-DMB-261ENST00000487996 ZNF804BA4D1E1 1349 aa12.89□□□□□ -0.35
HLA-DMB-261ENST00000487996 UQCRFS1P1P0C7P4 283 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 TTC39AQ5SRH9 613 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 GNL3LQ9NVN8 582 aaKnown RBP12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 TLR7Q9NYK1 1049 aaKnown RBP12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 PIM2Q9P1W9 311 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 GGA1Q9UJY5 639 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 DPEP1P16444 411 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 PI4K2BQ8TCG2 481 aa12.88□□□□□ -0.35
HLA-DMB-261ENST00000487996 A0A0G2JLW4 131 aa12.87□□□□□ -0.35
HLA-DMB-261ENST00000487996 CNTROBQ8N137 903 aa12.87□□□□□ -0.35
HLA-DMB-261ENST00000487996 KLHL34Q8N239 644 aa12.87□□□□□ -0.35
HLA-DMB-261ENST00000487996 MPNDQ8N594 471 aa12.87□□□□□ -0.35
HLA-DMB-261ENST00000487996 SLX4Q8IY92 1834 aa12.87□□□□□ -0.35
HLA-DMB-261ENST00000487996 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 UFL1O94874 794 aa12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 YY1P25490 414 aa12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 ADORA1P30542 326 aa12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 GPSM2P81274 684 aa12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 CCDC102BQ68D86 513 aa12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 C15orf52Q6ZUT6 534 aaKnown RBP12.86□□□□□ -0.35
HLA-DMB-261ENST00000487996 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 KCNA3P22001 575 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 DALRD3Q5D0E6 543 aaKnown RBP12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 TSHZ3Q63HK5 1081 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 TICAM2Q86XR7 235 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 EYA3Q99504 573 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 SEMA3EO15041 775 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 GSPT1P15170 499 aaKnown RBP12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 ZNF804AQ7Z570 1209 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 RTKN2Q8IZC4 609 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 SUPT20HQ8NEM7 779 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 HAUS7Q99871 368 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 AK9Q5TCS8 1911 aa12.85□□□□□ -0.35
HLA-DMB-261ENST00000487996 MED23Q9ULK4 1368 aa12.84□□□□□ -0.35
HLA-DMB-261ENST00000487996 LTBP1Q14766 1721 aa12.84□□□□□ -0.35
HLA-DMB-261ENST00000487996 BRCA1P38398 1863 aaKnown RBP12.84□□□□□ -0.35
HLA-DMB-261ENST00000487996 HIBADHP31937 336 aaKnown RBP12.84□□□□□ -0.35
HLA-DMB-261ENST00000487996 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
HLA-DMB-261ENST00000487996 C7orf43Q8WVR3 580 aa12.84□□□□□ -0.35
HLA-DMB-261ENST00000487996 SNAP23O00161 211 aa12.83□□□□□ -0.36
HLA-DMB-261ENST00000487996 SDSP20132 328 aa12.83□□□□□ -0.36
HLA-DMB-261ENST00000487996 PHKA1P46020 1223 aa12.83□□□□□ -0.36
HLA-DMB-261ENST00000487996 TTF1Q15361 905 aaPredicted RBP12.83□□□□□ -0.36
HLA-DMB-261ENST00000487996 RILPL2Q969X0 211 aa12.83□□□□□ -0.36
HLA-DMB-261ENST00000487996 FAM84BQ96KN1 310 aaPredicted RBP12.83□□□□□ -0.36
HLA-DMB-261ENST00000487996 HIP1O00291 1037 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 CDC45O75419 566 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 BCAMP50895 628 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 FBXO33Q7Z6M2 555 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 POLLQ9UGP5 575 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 DENND2AQ9ULE3 1009 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 PDS5AQ29RF7 1337 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 C21orf2O43822 256 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 GYG1P46976 350 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 RFX7Q2KHR2 1363 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 PAG1Q9NWQ8 432 aa12.82□□□□□ -0.36
HLA-DMB-261ENST00000487996 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 IRS2Q9Y4H2 1338 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 WASHC4Q2M389 1173 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 SPATA5Q8NB90 893 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 PSMD1Q99460 953 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 COA1Q9GZY4 146 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 VPS33BQ9H267 617 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 AKAP11Q9UKA4 1901 aa12.81□□□□□ -0.36
HLA-DMB-261ENST00000487996 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 G3V3G9 751 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 IGSF3O75054 1194 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 MCAMP43121 646 aa12.8□□□□□ -0.36
HLA-DMB-261ENST00000487996 RASGRF1Q13972 1273 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms