RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 GTF3C3Q9Y5Q9 886 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 ZNF609O15014 1411 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 LTBP3Q9NS15 1303 aa17.27■□□□□ 0.36
NUP188-207ENST00000487952 RIMBP2O15034 1052 aa17.27■□□□□ 0.36
NUP188-207ENST00000487952 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
NUP188-207ENST00000487952 TIMM10P62072 90 aa17.27■□□□□ 0.36
NUP188-207ENST00000487952 RASSF7Q02833 373 aa17.27■□□□□ 0.36
NUP188-207ENST00000487952 CAVIN4Q5BKX8 364 aa17.27■□□□□ 0.36
NUP188-207ENST00000487952 VPS37DQ86XT2 251 aa17.27■□□□□ 0.36
NUP188-207ENST00000487952 SNED1Q8TER0 1413 aa17.27■□□□□ 0.35
NUP188-207ENST00000487952 MED23Q9ULK4 1368 aa17.27■□□□□ 0.35
NUP188-207ENST00000487952 ZNF804AQ7Z570 1209 aa17.26■□□□□ 0.35
NUP188-207ENST00000487952 LARGE2Q8N3Y3 721 aa17.26■□□□□ 0.35
NUP188-207ENST00000487952 CCDC8Q9H0W5 538 aaPredicted RBP17.26■□□□□ 0.35
NUP188-207ENST00000487952 VPS33BQ9H267 617 aa17.26■□□□□ 0.35
NUP188-207ENST00000487952 ZNF277Q9NRM2 450 aaPredicted RBP17.26■□□□□ 0.35
NUP188-207ENST00000487952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.26■□□□□ 0.35
NUP188-207ENST00000487952 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 DUOX1Q9NRD9 1551 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 WTIPA6NIX2 430 aaPredicted RBP17.25■□□□□ 0.35
NUP188-207ENST00000487952 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
NUP188-207ENST00000487952 NUCB1Q02818 461 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 KIAA2012Q0VF49 1180 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 AOC3Q16853 763 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 C15orf52Q6ZUT6 534 aaKnown RBP17.25■□□□□ 0.35
NUP188-207ENST00000487952 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
NUP188-207ENST00000487952 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
NUP188-207ENST00000487952 KLRK1P26718 216 aa17.24■□□□□ 0.35
NUP188-207ENST00000487952 ADORA1P30542 326 aa17.24■□□□□ 0.35
NUP188-207ENST00000487952 HIBADHP31937 336 aaKnown RBP17.24■□□□□ 0.35
NUP188-207ENST00000487952 CCDC158Q5M9N0 1113 aa17.24■□□□□ 0.35
NUP188-207ENST00000487952 GPATCH3Q96I76 525 aa17.24■□□□□ 0.35
NUP188-207ENST00000487952 DBNDD2Q9BQY9 259 aa17.24■□□□□ 0.35
NUP188-207ENST00000487952 A0A1B0GUL6 1792 aa17.24■□□□□ 0.35
NUP188-207ENST00000487952 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
NUP188-207ENST00000487952 GYG1P46976 350 aa17.23■□□□□ 0.35
NUP188-207ENST00000487952 NIM1KQ8IY84 436 aa17.23■□□□□ 0.35
NUP188-207ENST00000487952 JDP2Q8WYK2 163 aa17.23■□□□□ 0.35
NUP188-207ENST00000487952 GNL3LQ9NVN8 582 aaKnown RBP17.23■□□□□ 0.35
NUP188-207ENST00000487952 SRCAPQ6ZRS2 3230 aa17.23■□□□□ 0.35
NUP188-207ENST00000487952 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
NUP188-207ENST00000487952 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
NUP188-207ENST00000487952 LMNB1P20700 586 aa17.22■□□□□ 0.35
NUP188-207ENST00000487952 BCAMP50895 628 aa17.22■□□□□ 0.35
NUP188-207ENST00000487952 DOK7Q18PE1 504 aa17.22■□□□□ 0.35
NUP188-207ENST00000487952 TTC39AQ5SRH9 613 aa17.22■□□□□ 0.35
NUP188-207ENST00000487952 TXNRD3Q86VQ6 643 aa17.22■□□□□ 0.35
NUP188-207ENST00000487952 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
NUP188-207ENST00000487952 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
NUP188-207ENST00000487952 TLR7Q9NYK1 1049 aaKnown RBP17.22■□□□□ 0.35
NUP188-207ENST00000487952 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
NUP188-207ENST00000487952 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
NUP188-207ENST00000487952 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
NUP188-207ENST00000487952 DBNDD1Q9H9R9 158 aa17.21■□□□□ 0.35
NUP188-207ENST00000487952 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
NUP188-207ENST00000487952 ECE2O60344 883 aa17.2■□□□□ 0.34
NUP188-207ENST00000487952 UQCRFS1P1P0C7P4 283 aa17.2■□□□□ 0.34
NUP188-207ENST00000487952 PHKA1P46020 1223 aa17.2■□□□□ 0.34
NUP188-207ENST00000487952 CD209Q9NNX6 404 aa17.2■□□□□ 0.34
NUP188-207ENST00000487952 IRS2Q9Y4H2 1338 aa17.2■□□□□ 0.34
NUP188-207ENST00000487952 PODNQ7Z5L7 613 aa17.19■□□□□ 0.34
NUP188-207ENST00000487952 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
NUP188-207ENST00000487952 MX1P20591 662 aa17.18■□□□□ 0.34
NUP188-207ENST00000487952 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
NUP188-207ENST00000487952 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
NUP188-207ENST00000487952 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
NUP188-207ENST00000487952 IQSEC3Q9UPP2 1182 aaPredicted RBP17.18■□□□□ 0.34
NUP188-207ENST00000487952 SEMA3EO15041 775 aa17.17■□□□□ 0.34
NUP188-207ENST00000487952 ERC2O15083 957 aa17.17■□□□□ 0.34
NUP188-207ENST00000487952 EIF6P56537 245 aaKnown RBP17.17■□□□□ 0.34
NUP188-207ENST00000487952 TDRD7Q8NHU6 1098 aaKnown RBP17.17■□□□□ 0.34
NUP188-207ENST00000487952 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
NUP188-207ENST00000487952 ARAP2Q8WZ64 1704 aa17.17■□□□□ 0.34
NUP188-207ENST00000487952 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
NUP188-207ENST00000487952 ZNRF3Q9ULT6 936 aa17.17■□□□□ 0.34
NUP188-207ENST00000487952 TTC41PQ6P2S7 1318 aa17.17■□□□□ 0.34
NUP188-207ENST00000487952 IL1R1P14778 569 aa17.16■□□□□ 0.34
NUP188-207ENST00000487952 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
NUP188-207ENST00000487952 PRELPP51888 382 aa17.16■□□□□ 0.34
NUP188-207ENST00000487952 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
NUP188-207ENST00000487952 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
NUP188-207ENST00000487952 ATP5JP18859 108 aa17.15■□□□□ 0.34
NUP188-207ENST00000487952 GLRX3O76003 335 aaKnown RBP17.14■□□□□ 0.33
NUP188-207ENST00000487952 PDE4AP27815 886 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 PDE1AP54750 535 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 GTF2IP78347 998 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 RASGRF1Q13972 1273 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 TNIP1Q15025 636 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 TSHZ3Q63HK5 1081 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.14■□□□□ 0.33
NUP188-207ENST00000487952 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
NUP188-207ENST00000487952 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 YDJCA8MPS7 323 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 RAD17O75943 681 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 MCAMP43121 646 aa17.13■□□□□ 0.33
NUP188-207ENST00000487952 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms