RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 TMX4Q9H1E5 349 aaPredicted RBP7.88□□□□□ -1.15
COL4A3-206ENST00000487633 SEC31BQ9NQW1 1179 aa7.88□□□□□ -1.15
COL4A3-206ENST00000487633 MANSC4A6NHS7 340 aaPredicted RBP7.87□□□□□ -1.15
COL4A3-206ENST00000487633 ALDH1A1P00352 501 aa7.87□□□□□ -1.15
COL4A3-206ENST00000487633 BCAMP50895 628 aa7.87□□□□□ -1.15
COL4A3-206ENST00000487633 EIF4A1P60842 406 aaKnown RBP7.87□□□□□ -1.15
COL4A3-206ENST00000487633 CNGB1Q14028 1251 aaPredicted RBP7.87□□□□□ -1.15
COL4A3-206ENST00000487633 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
COL4A3-206ENST00000487633 GUCD1Q96NT3 240 aa7.87□□□□□ -1.15
COL4A3-206ENST00000487633 MGAMO43451 1857 aa7.86□□□□□ -1.15
COL4A3-206ENST00000487633 TCIRG1Q13488 830 aa7.86□□□□□ -1.15
COL4A3-206ENST00000487633 PARP10Q53GL7 1025 aa7.86□□□□□ -1.15
COL4A3-206ENST00000487633 CC2D1BQ5T0F9 858 aaKnown RBP7.86□□□□□ -1.15
COL4A3-206ENST00000487633 CDAN1Q8IWY9 1227 aa7.86□□□□□ -1.15
COL4A3-206ENST00000487633 FAM43AQ8N2R8 423 aa7.86□□□□□ -1.15
COL4A3-206ENST00000487633 AGBL3Q8NEM8 1001 aa7.86□□□□□ -1.15
COL4A3-206ENST00000487633 ZBED3Q96IU2 234 aaPredicted RBP7.86□□□□□ -1.15
COL4A3-206ENST00000487633 MS4A4AQ96JQ5 239 aa7.86□□□□□ -1.15
COL4A3-206ENST00000487633 TESPA1A2RU30 521 aaPredicted RBP7.85□□□□□ -1.15
COL4A3-206ENST00000487633 UFL1O94874 794 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 ARMC9Q7Z3E5 817 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 BRI3BPQ8WY22 251 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 FAM89AQ96GI7 184 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 GDF15Q99988 308 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 TRMT112Q9UI30 125 aaKnown RBP7.85□□□□□ -1.15
COL4A3-206ENST00000487633 DOCK3Q8IZD9 2030 aa7.85□□□□□ -1.15
COL4A3-206ENST00000487633 USP2O75604 605 aaPredicted RBP7.84□□□□□ -1.15
COL4A3-206ENST00000487633 AIMP1Q12904 312 aaKnown RBP7.84□□□□□ -1.15
COL4A3-206ENST00000487633 TAF7Q15545 349 aaPredicted RBP7.84□□□□□ -1.15
COL4A3-206ENST00000487633 DACT2Q5SW24 774 aa7.84□□□□□ -1.15
COL4A3-206ENST00000487633 NBPF12Q5TAG4 269 aaPredicted RBP7.84□□□□□ -1.15
COL4A3-206ENST00000487633 NBPF11Q86T75 865 aa7.84□□□□□ -1.15
COL4A3-206ENST00000487633 TXNRD3Q86VQ6 643 aa7.84□□□□□ -1.15
COL4A3-206ENST00000487633 NECTIN2Q92692 538 aa7.84□□□□□ -1.15
COL4A3-206ENST00000487633 FAM161BQ96MY7 647 aa7.84□□□□□ -1.15
COL4A3-206ENST00000487633 ZC3H12CQ9C0D7 883 aaKnown RBP7.84□□□□□ -1.15
COL4A3-206ENST00000487633 ZMYND8Q9ULU4 1186 aaPredicted RBP7.84□□□□□ -1.15
COL4A3-206ENST00000487633 SH3TC1Q8TE82 1336 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 PER1O15534 1290 aaPredicted RBP7.83□□□□□ -1.16
COL4A3-206ENST00000487633 ZBTB48P10074 688 aaPredicted RBP7.83□□□□□ -1.16
COL4A3-206ENST00000487633 HSPA5P11021 654 aaKnown RBP7.83□□□□□ -1.16
COL4A3-206ENST00000487633 CCL5P13501 91 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 SYN1P17600 705 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 KLRK1P26718 216 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 GJA8P48165 433 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 INHBEP58166 350 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 SF3B3Q15393 1217 aaKnown RBP7.83□□□□□ -1.16
COL4A3-206ENST00000487633 COPS6Q7L5N1 327 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 DIS3LQ8TF46 1054 aaKnown RBP7.83□□□□□ -1.16
COL4A3-206ENST00000487633 JARID2Q92833 1246 aaPredicted RBP7.83□□□□□ -1.16
COL4A3-206ENST00000487633 CCDC85AQ96PX6 553 aaPredicted RBP7.83□□□□□ -1.16
COL4A3-206ENST00000487633 EYA3Q99504 573 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 UNC93B1Q9H1C4 597 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 ELP3Q9H9T3 547 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 KNSTRNQ9Y448 316 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 TTC28Q96AY4 2481 aa7.83□□□□□ -1.16
COL4A3-206ENST00000487633 A0A1W2PPC1 479 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 USP17L3A6NCW0 530 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 USP17L4A6NCW7 530 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 ATP5J2-PTCD1G3V325 749 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 EIF2S2P20042 333 aaKnown RBP7.82□□□□□ -1.16
COL4A3-206ENST00000487633 RPS8P62241 208 aaKnown RBP7.82□□□□□ -1.16
COL4A3-206ENST00000487633 TAF1CQ15572 869 aaPredicted RBP7.82□□□□□ -1.16
COL4A3-206ENST00000487633 USP17L1Q7RTZ2 530 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 XAGE3Q8WTP9 111 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 DEFB129Q9H1M3 183 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 PODXL2Q9NZ53 605 aa7.82□□□□□ -1.16
COL4A3-206ENST00000487633 CLRN2A0PK11 232 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 EVI5O60447 810 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 FARP2O94887 1054 aaPredicted RBP7.81□□□□□ -1.16
COL4A3-206ENST00000487633 NF2P35240 595 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 LACTBP83111 547 aaPredicted RBP7.81□□□□□ -1.16
COL4A3-206ENST00000487633 KRT24Q2M2I5 525 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 KIAA0825Q8IV33 1275 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 U2AF1L4Q8WU68 220 aaKnown RBP7.81□□□□□ -1.16
COL4A3-206ENST00000487633 FBXW7Q969H0 707 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 OPTNQ96CV9 577 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 TRIM47Q96LD4 638 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 RNF208Q9H0X6 261 aa7.81□□□□□ -1.16
COL4A3-206ENST00000487633 DDX60LQ5H9U9 1706 aaKnown RBP7.81□□□□□ -1.16
COL4A3-206ENST00000487633 RPTORQ8N122 1335 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 G3V3G9 751 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 GJB1P08034 283 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 OSBPP22059 807 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 BMP8BP34820 402 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 LRIT3Q3SXY7 679 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 DCAF8Q5TAQ9 597 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 GPR153Q6NV75 609 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.8□□□□□ -1.16
COL4A3-206ENST00000487633 TMC4Q7Z404 712 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 PODNQ7Z5L7 613 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 CERS5Q8N5B7 392 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
COL4A3-206ENST00000487633 HTATIP2Q9BUP3 242 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 ANKIB1Q9P2G1 1089 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 GGA1Q9UJY5 639 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 GABRQQ9UN88 632 aa7.8□□□□□ -1.16
COL4A3-206ENST00000487633 NR2E3Q9Y5X4 410 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms