RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 PIBF1Q8WXW3 757 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 IQSEC3Q9UPP2 1182 aaPredicted RBP13.71□□□□□ -0.21
TRA2B-214ENST00000487615 IFT172Q9UG01 1749 aa13.71□□□□□ -0.21
TRA2B-214ENST00000487615 CUL4AQ13619 759 aa13.71□□□□□ -0.22
TRA2B-214ENST00000487615 WTAPQ15007 396 aa13.71□□□□□ -0.22
TRA2B-214ENST00000487615 ME3Q16798 604 aa13.71□□□□□ -0.22
TRA2B-214ENST00000487615 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.22
TRA2B-214ENST00000487615 SLC4A4Q9Y6R1 1079 aa13.71□□□□□ -0.22
TRA2B-214ENST00000487615 PDE8AO60658 829 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 CYP7A1P22680 504 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 DBNLQ9UJU6 430 aaKnown RBP13.7□□□□□ -0.22
TRA2B-214ENST00000487615 RBM10P98175 930 aaKnown RBP13.7□□□□□ -0.22
TRA2B-214ENST00000487615 LLPHQ9BRT6 129 aaKnown RBP13.7□□□□□ -0.22
TRA2B-214ENST00000487615 CARD10Q9BWT7 1032 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 TLR7Q9NYK1 1049 aaKnown RBP13.7□□□□□ -0.22
TRA2B-214ENST00000487615 ZKSCAN5Q9Y2L8 839 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 ANO6Q4KMQ2 910 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 CCDC112Q8NEF3 446 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
TRA2B-214ENST00000487615 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 HAUS7Q99871 368 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 MKNK2Q9HBH9 465 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 CFAP100Q494V2 611 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 NBPF5PQ86XG9 351 aaPredicted RBP13.7□□□□□ -0.22
TRA2B-214ENST00000487615 TMTC2Q8N394 836 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
TRA2B-214ENST00000487615 TYRO3Q06418 890 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 SOGA3Q5TF21 947 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 FAM173BQ6P4H8 233 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 DTNBO60941 627 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 CNNM3Q8NE01 707 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 DSCC1Q9BVC3 393 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 ATP10DQ9P241 1426 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
TRA2B-214ENST00000487615 CLSTN1O94985 981 aa13.69□□□□□ -0.22
TRA2B-214ENST00000487615 SASH1O94885 1247 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 GNAT2P19087 354 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 MAGEB6Q8N7X4 407 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 ESR2Q92731 530 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 NLRP3Q96P20 1036 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 BCL11BQ9C0K0 894 aaPredicted RBP13.68□□□□□ -0.22
TRA2B-214ENST00000487615 BIN1O00499 593 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 CYP27B1O15528 508 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 GPAA1O43292 621 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 SFPQP23246 707 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRA2B-214ENST00000487615 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
TRA2B-214ENST00000487615 PARP10Q53GL7 1025 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 MYO5BQ9ULV0 1848 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 ADCK5Q3MIX3 580 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 TOM1O60784 492 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 SETDB2Q96T68 719 aa13.68□□□□□ -0.22
TRA2B-214ENST00000487615 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 RTN1Q16799 776 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 CDC37L1Q7L3B6 337 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 SMARCE1Q969G3 411 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 CDK5RAP3Q96JB5 506 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 SEC62Q99442 399 aaKnown RBP13.67□□□□□ -0.22
TRA2B-214ENST00000487615 SPATA31A3Q5VYP0 1347 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 REREQ9P2R6 1566 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 KIF2CQ99661 725 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 IGKV5-2P06315 115 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 ZAP70P43403 619 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 ATP2B2Q01814 1243 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 LRRC24Q50LG9 513 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 DNAJC25Q9H1X3 360 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
TRA2B-214ENST00000487615 SPTLC2O15270 562 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 TAF5LO75529 589 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 PCCAP05165 728 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 STIM1Q13586 685 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 PPFIBP1Q86W92 1011 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 ARGLU1Q9NWB6 273 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 SYKP43405 635 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 PTPN12Q05209 780 aaKnown RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 PDE4BQ07343 736 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 GAS2L3Q86XJ1 694 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 CRNKL1Q9BZJ0 848 aaKnown RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 NCOA5Q9HCD5 579 aaKnown RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 ADCY9O60503 1353 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 NEMFO60524 1076 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 SHPRHQ149N8 1683 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 SPTY2D1Q68D10 685 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 BRAPQ7Z569 592 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 ZNF444Q8N0Y2 327 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 CHAMP1Q96JM3 812 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 GPR108Q9NPR9 543 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 MAGEC2Q9UBF1 373 aaPredicted RBP13.66□□□□□ -0.22
TRA2B-214ENST00000487615 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 TSPY2A6NKD2 308 aa13.66□□□□□ -0.22
TRA2B-214ENST00000487615 JAK2O60674 1132 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms