RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 USP44Q9H0E7 712 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 BICC1Q9H694 974 aaKnown RBP14.44□□□□□ -0.1
SPEN-205ENST00000487496 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
SPEN-205ENST00000487496 CNTNAP1P78357 1384 aa14.44□□□□□ -0.1
SPEN-205ENST00000487496 RABL6Q3YEC7 729 aaPredicted RBP14.43□□□□□ -0.1
SPEN-205ENST00000487496 CST9Q5W186 159 aa14.43□□□□□ -0.1
SPEN-205ENST00000487496 CDC37L1Q7L3B6 337 aa14.43□□□□□ -0.1
SPEN-205ENST00000487496 GMLQ99445 158 aa14.43□□□□□ -0.1
SPEN-205ENST00000487496 CNNM1Q9NRU3 951 aa14.43□□□□□ -0.1
SPEN-205ENST00000487496 IRS2Q9Y4H2 1338 aa14.42□□□□□ -0.1
SPEN-205ENST00000487496 ZNF609O15014 1411 aa14.42□□□□□ -0.1
SPEN-205ENST00000487496 USP17L8P0C7I0 530 aa14.42□□□□□ -0.1
SPEN-205ENST00000487496 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
SPEN-205ENST00000487496 ZNF280AP59817 542 aaPredicted RBP14.42□□□□□ -0.1
SPEN-205ENST00000487496 KIF4BQ2VIQ3 1234 aa14.42□□□□□ -0.1
SPEN-205ENST00000487496 DACT2Q5SW24 774 aa14.42□□□□□ -0.1
SPEN-205ENST00000487496 STRIP1Q5VSL9 837 aa14.42□□□□□ -0.1
SPEN-205ENST00000487496 C15orf52Q6ZUT6 534 aaKnown RBP14.42□□□□□ -0.1
SPEN-205ENST00000487496 ANKRD44Q8N8A2 993 aa14.42□□□□□ -0.1
SPEN-205ENST00000487496 ABT1Q9ULW3 272 aaKnown RBP14.42□□□□□ -0.1
SPEN-205ENST00000487496 RASSF10A6NK89 507 aa14.41□□□□□ -0.1
SPEN-205ENST00000487496 PLIN1O60240 522 aa14.41□□□□□ -0.1
SPEN-205ENST00000487496 HNRNPUQ00839 825 aaKnown RBP eCLIP14.41□□□□□ -0.1
SPEN-205ENST00000487496 DEFB115Q30KQ5 88 aa14.41□□□□□ -0.1
SPEN-205ENST00000487496 USP48Q86UV5 1035 aa14.41□□□□□ -0.1
SPEN-205ENST00000487496 MXD3Q9BW11 206 aa14.41□□□□□ -0.1
SPEN-205ENST00000487496 PUS3Q9BZE2 481 aaKnown RBP14.41□□□□□ -0.1
SPEN-205ENST00000487496 API5Q9BZZ5 524 aaKnown RBP14.41□□□□□ -0.1
SPEN-205ENST00000487496 CELF2O95319 508 aaKnown RBP14.4□□□□□ -0.1
SPEN-205ENST00000487496 VEGFBP49765 207 aa14.4□□□□□ -0.1
SPEN-205ENST00000487496 FBXW7Q969H0 707 aa14.4□□□□□ -0.1
SPEN-205ENST00000487496 CD209Q9NNX6 404 aa14.4□□□□□ -0.1
SPEN-205ENST00000487496 PSME4Q14997 1843 aa14.39□□□□□ -0.11
SPEN-205ENST00000487496 GTF2IP78347 998 aa14.39□□□□□ -0.11
SPEN-205ENST00000487496 TTLL5Q6EMB2 1281 aa14.39□□□□□ -0.11
SPEN-205ENST00000487496 DLK2Q6UY11 383 aa14.39□□□□□ -0.11
SPEN-205ENST00000487496 DCPSQ96C86 337 aaKnown RBP14.39□□□□□ -0.11
SPEN-205ENST00000487496 MYOZ2Q9NPC6 264 aa14.39□□□□□ -0.11
SPEN-205ENST00000487496 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
SPEN-205ENST00000487496 MYO3BQ8WXR4 1341 aa14.39□□□□□ -0.11
SPEN-205ENST00000487496 HSPA1AP0DMV8 641 aaKnown RBP14.38□□□□□ -0.11
SPEN-205ENST00000487496 HSPA1BP0DMV9 641 aaKnown RBP14.38□□□□□ -0.11
SPEN-205ENST00000487496 SCARF1Q14162 830 aa14.38□□□□□ -0.11
SPEN-205ENST00000487496 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
SPEN-205ENST00000487496 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
SPEN-205ENST00000487496 ZNF408Q9H9D4 720 aa14.38□□□□□ -0.11
SPEN-205ENST00000487496 TLL2Q9Y6L7 1015 aa14.38□□□□□ -0.11
SPEN-205ENST00000487496 ASTN2O75129 1339 aaPredicted RBP14.38□□□□□ -0.11
SPEN-205ENST00000487496 KIF16BQ96L93 1317 aa14.38□□□□□ -0.11
SPEN-205ENST00000487496 ADM5C9JUS6 153 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 IL1R1P14778 569 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 UBE4AQ14139 1066 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 LRRC24Q50LG9 513 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 ANGEL2Q5VTE6 544 aaKnown RBP14.37□□□□□ -0.11
SPEN-205ENST00000487496 ZNF804AQ7Z570 1209 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 SAPCD2Q86UD0 394 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 OGFOD1Q8N543 542 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 GGA3Q9NZ52 723 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 MROH5Q6ZUA9 1318 aa14.37□□□□□ -0.11
SPEN-205ENST00000487496 UBTFL1P0CB47 393 aaPredicted RBP14.36□□□□□ -0.11
SPEN-205ENST00000487496 SULF1Q8IWU6 871 aa14.36□□□□□ -0.11
SPEN-205ENST00000487496 KLHDC4Q8TBB5 520 aa14.36□□□□□ -0.11
SPEN-205ENST00000487496 WDR33Q9C0J8 1336 aaKnown RBP14.36□□□□□ -0.11
SPEN-205ENST00000487496 TRPM7Q96QT4 1865 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 BCAR3O75815 825 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 RFX5P48382 616 aaPredicted RBP14.35□□□□□ -0.11
SPEN-205ENST00000487496 MMP14P50281 582 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 NBPF9Q3BBW0 867 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 METTL24Q5JXM2 366 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 CYP4F22Q6NT55 531 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 PAXIP1Q6ZW49 1069 aaPredicted RBP14.35□□□□□ -0.11
SPEN-205ENST00000487496 KIAA0825Q8IV33 1275 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 CERS5Q8N5B7 392 aa14.35□□□□□ -0.11
SPEN-205ENST00000487496 FAM84BQ96KN1 310 aaPredicted RBP14.35□□□□□ -0.11
SPEN-205ENST00000487496 A0A1B0GUL6 1792 aa14.34□□□□□ -0.11
SPEN-205ENST00000487496 ZNF646O15015 1829 aaPredicted RBP14.34□□□□□ -0.11
SPEN-205ENST00000487496 WNT10BO00744 389 aa14.34□□□□□ -0.11
SPEN-205ENST00000487496 IPO8O15397 1037 aaKnown RBP14.34□□□□□ -0.11
SPEN-205ENST00000487496 SASH1O94885 1247 aa14.34□□□□□ -0.11
SPEN-205ENST00000487496 PDE8BO95263 885 aa14.34□□□□□ -0.11
SPEN-205ENST00000487496 HIBADHP31937 336 aaKnown RBP14.34□□□□□ -0.11
SPEN-205ENST00000487496 ECE1P42892 770 aa14.34□□□□□ -0.11
SPEN-205ENST00000487496 GYG1P46976 350 aa14.34□□□□□ -0.11
SPEN-205ENST00000487496 INTS3Q68E01 1043 aaKnown RBP14.34□□□□□ -0.11
SPEN-205ENST00000487496 CAPNS2Q96L46 248 aa14.34□□□□□ -0.11
SPEN-205ENST00000487496 TRIM27P14373 513 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 PTPN12Q05209 780 aaKnown RBP14.33□□□□□ -0.12
SPEN-205ENST00000487496 GRM1Q13255 1194 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 VGLL2Q8N8G2 317 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 TDRD7Q8NHU6 1098 aaKnown RBP14.33□□□□□ -0.12
SPEN-205ENST00000487496 FRAT1Q92837 279 aaPredicted RBP14.33□□□□□ -0.12
SPEN-205ENST00000487496 HHIPL1Q96JK4 782 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 MEIS3Q99687 375 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 HDAC9Q9UKV0 1011 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 LRRFIP2Q9Y608 721 aaKnown RBP14.33□□□□□ -0.12
SPEN-205ENST00000487496 PITPNM2Q9BZ72 1349 aa14.33□□□□□ -0.12
SPEN-205ENST00000487496 POLR2AP24928 1970 aaKnown RBP14.33□□□□□ -0.12
SPEN-205ENST00000487496 EYA2O00167 538 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms