RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CHMP3Q9Y3E7 222 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 RAD17O75943 681 aa13.36□□□□□ -0.27
TOP3B-216ENST00000487485 GNAI2P04899 355 aa13.36□□□□□ -0.27
TOP3B-216ENST00000487485 CENPBP07199 599 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-216ENST00000487485 GRAPQ13588 217 aa13.36□□□□□ -0.27
TOP3B-216ENST00000487485 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-216ENST00000487485 DLK2Q6UY11 383 aa13.36□□□□□ -0.27
TOP3B-216ENST00000487485 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
TOP3B-216ENST00000487485 GRAPLQ8TC17 118 aaPredicted RBP13.36□□□□□ -0.27
TOP3B-216ENST00000487485 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
TOP3B-216ENST00000487485 VPS33BQ9H267 617 aa13.36□□□□□ -0.27
TOP3B-216ENST00000487485 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
TOP3B-216ENST00000487485 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
TOP3B-216ENST00000487485 COL4A1P02462 1669 aa13.35□□□□□ -0.27
TOP3B-216ENST00000487485 POLR2AP24928 1970 aaKnown RBP13.35□□□□□ -0.27
TOP3B-216ENST00000487485 SHTN1A0MZ66 631 aa13.35□□□□□ -0.27
TOP3B-216ENST00000487485 ANKRD18BA2A2Z9 1011 aa13.35□□□□□ -0.27
TOP3B-216ENST00000487485 BBOX1O75936 387 aa13.35□□□□□ -0.27
TOP3B-216ENST00000487485 ITGA6P23229 1130 aa13.35□□□□□ -0.27
TOP3B-216ENST00000487485 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
TOP3B-216ENST00000487485 IFIT5Q13325 482 aaKnown RBP13.35□□□□□ -0.27
TOP3B-216ENST00000487485 TRPM4Q8TD43 1214 aa13.35□□□□□ -0.27
TOP3B-216ENST00000487485 RTFDC1Q9BY42 306 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-216ENST00000487485 TMX4Q9H1E5 349 aaPredicted RBP13.35□□□□□ -0.27
TOP3B-216ENST00000487485 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
TOP3B-216ENST00000487485 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
TOP3B-216ENST00000487485 CDC37L1Q7L3B6 337 aa13.34□□□□□ -0.27
TOP3B-216ENST00000487485 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
TOP3B-216ENST00000487485 ANKRD18AQ8IVF6 992 aa13.34□□□□□ -0.27
TOP3B-216ENST00000487485 SUPT20HQ8NEM7 779 aa13.34□□□□□ -0.27
TOP3B-216ENST00000487485 ZC3H15Q8WU90 426 aaKnown RBP13.34□□□□□ -0.27
TOP3B-216ENST00000487485 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
TOP3B-216ENST00000487485 C1orf115Q9H7X2 142 aa13.34□□□□□ -0.27
TOP3B-216ENST00000487485 ZBTB40Q9NUA8 1239 aa13.34□□□□□ -0.27
TOP3B-216ENST00000487485 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
TOP3B-216ENST00000487485 MPNDQ8N594 471 aa13.33□□□□□ -0.28
TOP3B-216ENST00000487485 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
TOP3B-216ENST00000487485 CNOT7Q9UIV1 285 aaKnown RBP13.33□□□□□ -0.28
TOP3B-216ENST00000487485 YDJCA8MPS7 323 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 IGHMBP2P38935 993 aaKnown RBP13.32□□□□□ -0.28
TOP3B-216ENST00000487485 HUNKP57058 714 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 KIAA2012Q0VF49 1180 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 NOGQ13253 232 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 TNIP1Q15025 636 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
TOP3B-216ENST00000487485 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
TOP3B-216ENST00000487485 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
TOP3B-216ENST00000487485 MTX1Q13505 466 aa13.31□□□□□ -0.28
TOP3B-216ENST00000487485 MPHOSPH8Q99549 860 aa13.31□□□□□ -0.28
TOP3B-216ENST00000487485 BSDC1Q9NW68 430 aaPredicted RBP13.31□□□□□ -0.28
TOP3B-216ENST00000487485 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
TOP3B-216ENST00000487485 LRRC37AA6NMS7 1700 aa13.3□□□□□ -0.28
TOP3B-216ENST00000487485 FAM155AB1AL88 458 aaPredicted RBP13.3□□□□□ -0.28
TOP3B-216ENST00000487485 H7C1D1 291 aa13.3□□□□□ -0.28
TOP3B-216ENST00000487485 RFX5P48382 616 aaPredicted RBP13.3□□□□□ -0.28
TOP3B-216ENST00000487485 ATP8B2P98198 1209 aa13.3□□□□□ -0.28
TOP3B-216ENST00000487485 LDHAL6AQ6ZMR3 332 aa13.3□□□□□ -0.28
TOP3B-216ENST00000487485 SAMD7Q7Z3H4 446 aa13.3□□□□□ -0.28
TOP3B-216ENST00000487485 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
TOP3B-216ENST00000487485 KLHDC4Q8TBB5 520 aa13.3□□□□□ -0.28
TOP3B-216ENST00000487485 PNMA6EA0A0J9YXQ4 647 aa13.29□□□□□ -0.28
TOP3B-216ENST00000487485 EGFRP00533 1210 aa13.29□□□□□ -0.28
TOP3B-216ENST00000487485 SOX10P56693 466 aa13.29□□□□□ -0.28
TOP3B-216ENST00000487485 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
TOP3B-216ENST00000487485 PTPN12Q05209 780 aaKnown RBP13.29□□□□□ -0.28
TOP3B-216ENST00000487485 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
TOP3B-216ENST00000487485 CEP85Q6P2H3 762 aa13.29□□□□□ -0.28
TOP3B-216ENST00000487485 MINPP1Q9UNW1 487 aa13.29□□□□□ -0.28
TOP3B-216ENST00000487485 A0A1B0GUL6 1792 aa13.28□□□□□ -0.28
TOP3B-216ENST00000487485 KIF23Q02241 960 aaPredicted RBP13.28□□□□□ -0.28
TOP3B-216ENST00000487485 TBC1D10BQ4KMP7 808 aaPredicted RBP13.28□□□□□ -0.28
TOP3B-216ENST00000487485 RPAP2Q8IXW5 612 aaPredicted RBP13.28□□□□□ -0.28
TOP3B-216ENST00000487485 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
TOP3B-216ENST00000487485 PUS3Q9BZE2 481 aaKnown RBP13.28□□□□□ -0.28
TOP3B-216ENST00000487485 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
TOP3B-216ENST00000487485 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
TOP3B-216ENST00000487485 PSMD14O00487 310 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 TRPA1O75762 1119 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 GPSM2P81274 684 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 POLA2Q14181 598 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.29
TOP3B-216ENST00000487485 KRT26Q7Z3Y9 468 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 SSH3Q8TE77 659 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 DPF2Q92785 391 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 GBA2Q9HCG7 927 aaPredicted RBP13.27□□□□□ -0.29
TOP3B-216ENST00000487485 COPRSQ9NQ92 184 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
TOP3B-216ENST00000487485 PA2G4Q9UQ80 394 aaKnown RBP13.27□□□□□ -0.29
TOP3B-216ENST00000487485 ADM5C9JUS6 153 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 EYA2O00167 538 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 ZNF157P51786 506 aaPredicted RBP13.26□□□□□ -0.29
TOP3B-216ENST00000487485 CHRNDQ07001 517 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 LRRC24Q50LG9 513 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 C2orf69Q8N8R5 385 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
TOP3B-216ENST00000487485 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms