RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 MED23Q9ULK4 1368 aa19.8■□□□□ 0.76
NME1-208ENST00000487481 MMP14P50281 582 aa19.79■□□□□ 0.76
NME1-208ENST00000487481 FXR1P51114 621 aaKnown RBP eCLIP19.79■□□□□ 0.76
NME1-208ENST00000487481 DACT2Q5SW24 774 aa19.79■□□□□ 0.76
NME1-208ENST00000487481 LDLRAD1Q5T700 205 aa19.79■□□□□ 0.76
NME1-208ENST00000487481 APOBEC3FQ8IUX4 373 aaKnown RBP19.79■□□□□ 0.76
NME1-208ENST00000487481 ANKRD18AQ8IVF6 992 aa19.79■□□□□ 0.76
NME1-208ENST00000487481 MANSC4A6NHS7 340 aaPredicted RBP19.78■□□□□ 0.76
NME1-208ENST00000487481 PDE8AO60658 829 aa19.78■□□□□ 0.76
NME1-208ENST00000487481 INHBEP58166 350 aa19.78■□□□□ 0.76
NME1-208ENST00000487481 COL1A1P02452 1464 aaPredicted RBP19.78■□□□□ 0.76
NME1-208ENST00000487481 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
NME1-208ENST00000487481 IFNL1Q8IU54 200 aa19.77■□□□□ 0.76
NME1-208ENST00000487481 SASH1O94885 1247 aa19.76■□□□□ 0.75
NME1-208ENST00000487481 PCCAP05165 728 aaPredicted RBP19.76■□□□□ 0.75
NME1-208ENST00000487481 PRKG1Q13976 671 aa19.76■□□□□ 0.75
NME1-208ENST00000487481 STRIP1Q5VSL9 837 aa19.76■□□□□ 0.75
NME1-208ENST00000487481 RIC3Q7Z5B4 369 aa19.76■□□□□ 0.75
NME1-208ENST00000487481 CCDC191Q8NCU4 936 aa19.76■□□□□ 0.75
NME1-208ENST00000487481 ERO1AQ96HE7 468 aa19.76■□□□□ 0.75
NME1-208ENST00000487481 ANGEL1Q9UNK9 670 aaKnown RBP19.76■□□□□ 0.75
NME1-208ENST00000487481 LAS1LQ9Y4W2 734 aaKnown RBP19.76■□□□□ 0.75
NME1-208ENST00000487481 SPEF2Q9C093 1822 aa19.75■□□□□ 0.75
NME1-208ENST00000487481 ZBTB48P10074 688 aaPredicted RBP19.75■□□□□ 0.75
NME1-208ENST00000487481 ARMC5Q96C12 935 aa19.75■□□□□ 0.75
NME1-208ENST00000487481 CCDC85AQ96PX6 553 aaPredicted RBP19.75■□□□□ 0.75
NME1-208ENST00000487481 CDC5LQ99459 802 aaKnown RBP19.75■□□□□ 0.75
NME1-208ENST00000487481 MXD3Q9BW11 206 aa19.75■□□□□ 0.75
NME1-208ENST00000487481 FBXW7Q969H0 707 aa19.74■□□□□ 0.75
NME1-208ENST00000487481 PTPN22Q9Y2R2 807 aa19.74■□□□□ 0.75
NME1-208ENST00000487481 MYH3P11055 1940 aa19.74■□□□□ 0.75
NME1-208ENST00000487481 SLC10A4Q96EP9 437 aa19.73■□□□□ 0.75
NME1-208ENST00000487481 MYD88Q99836 296 aa19.73■□□□□ 0.75
NME1-208ENST00000487481 COA1Q9GZY4 146 aa19.73■□□□□ 0.75
NME1-208ENST00000487481 CWC25Q9NXE8 425 aaPredicted RBP19.73■□□□□ 0.75
NME1-208ENST00000487481 IGF2BP3O00425 579 aaKnown RBP eCLIP19.72■□□□□ 0.75
NME1-208ENST00000487481 EN2P19622 333 aaPredicted RBP19.72■□□□□ 0.75
NME1-208ENST00000487481 MAP3K11Q16584 847 aa19.72■□□□□ 0.75
NME1-208ENST00000487481 DUSP27Q5VZP5 1158 aa19.72■□□□□ 0.75
NME1-208ENST00000487481 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
NME1-208ENST00000487481 WNK4Q96J92 1243 aa19.72■□□□□ 0.75
NME1-208ENST00000487481 ECM29Q5VYK3 1845 aa19.72■□□□□ 0.75
NME1-208ENST00000487481 CEP290O15078 2479 aa19.71■□□□□ 0.75
NME1-208ENST00000487481 CCT4P50991 539 aaKnown RBP19.71■□□□□ 0.75
NME1-208ENST00000487481 CTSWP56202 376 aa19.71■□□□□ 0.75
NME1-208ENST00000487481 NEUROD2Q15784 382 aa19.71■□□□□ 0.75
NME1-208ENST00000487481 CD99L2Q8TCZ2 262 aa19.71■□□□□ 0.75
NME1-208ENST00000487481 ZBED3Q96IU2 234 aaPredicted RBP19.71■□□□□ 0.75
NME1-208ENST00000487481 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
NME1-208ENST00000487481 MINPP1Q9UNW1 487 aa19.71■□□□□ 0.75
NME1-208ENST00000487481 TRIOBPQ9H2D6 2365 aa19.71■□□□□ 0.75
NME1-208ENST00000487481 WTIPA6NIX2 430 aaPredicted RBP19.7■□□□□ 0.74
NME1-208ENST00000487481 UNCXA6NJT0 531 aa19.7■□□□□ 0.74
NME1-208ENST00000487481 EFCC1Q9HA90 598 aa19.7■□□□□ 0.74
NME1-208ENST00000487481 TRIM35Q9UPQ4 493 aa19.7■□□□□ 0.74
NME1-208ENST00000487481 SSC5DA1L4H1 1573 aa19.7■□□□□ 0.74
NME1-208ENST00000487481 PPP1R12BO60237 982 aaPredicted RBP19.69■□□□□ 0.74
NME1-208ENST00000487481 CRHR2Q13324 411 aa19.69■□□□□ 0.74
NME1-208ENST00000487481 TTLL5Q6EMB2 1281 aa19.69■□□□□ 0.74
NME1-208ENST00000487481 OTUD7BQ6GQQ9 843 aa19.69■□□□□ 0.74
NME1-208ENST00000487481 KIAA0825Q8IV33 1275 aa19.69■□□□□ 0.74
NME1-208ENST00000487481 JARID2Q92833 1246 aaPredicted RBP19.69■□□□□ 0.74
NME1-208ENST00000487481 DEFB129Q9H1M3 183 aa19.69■□□□□ 0.74
NME1-208ENST00000487481 FZD1Q9UP38 647 aa19.69■□□□□ 0.74
NME1-208ENST00000487481 PPP2R3BQ9Y5P8 575 aa19.69■□□□□ 0.74
NME1-208ENST00000487481 SZT2Q5T011 3432 aa19.68■□□□□ 0.74
NME1-208ENST00000487481 CLMNQ96JQ2 1002 aa19.68■□□□□ 0.74
NME1-208ENST00000487481 TMEM106CQ9BVX2 250 aa19.68■□□□□ 0.74
NME1-208ENST00000487481 PHAXQ9H814 394 aaKnown RBP19.68■□□□□ 0.74
NME1-208ENST00000487481 COLQQ9Y215 455 aaPredicted RBP19.68■□□□□ 0.74
NME1-208ENST00000487481 SP3Q02447 781 aa19.67■□□□□ 0.74
NME1-208ENST00000487481 ZNF333Q96JL9 665 aa19.67■□□□□ 0.74
NME1-208ENST00000487481 METTL22Q9BUU2 404 aaPredicted RBP19.67■□□□□ 0.74
NME1-208ENST00000487481 LEMD3Q9Y2U8 911 aa19.67■□□□□ 0.74
NME1-208ENST00000487481 TXNRD3Q86VQ6 643 aa19.66■□□□□ 0.74
NME1-208ENST00000487481 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
NME1-208ENST00000487481 TTLL11Q8NHH1 800 aa19.66■□□□□ 0.74
NME1-208ENST00000487481 DLGAP5Q15398 846 aa19.65■□□□□ 0.74
NME1-208ENST00000487481 MTMR14Q8NCE2 650 aa19.65■□□□□ 0.74
NME1-208ENST00000487481 GREM2Q9H772 168 aa19.65■□□□□ 0.74
NME1-208ENST00000487481 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.65■□□□□ 0.74
NME1-208ENST00000487481 TESPA1A2RU30 521 aaPredicted RBP19.64■□□□□ 0.73
NME1-208ENST00000487481 DDX58O95786 925 aaKnown RBP19.64■□□□□ 0.73
NME1-208ENST00000487481 GTF2IP78347 998 aa19.64■□□□□ 0.73
NME1-208ENST00000487481 SUPT20HL1Q3ZLR7 823 aa19.64■□□□□ 0.73
NME1-208ENST00000487481 RUNDC1Q96C34 613 aa19.64■□□□□ 0.73
NME1-208ENST00000487481 MBIPQ9NS73 344 aa19.64■□□□□ 0.73
NME1-208ENST00000487481 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.73
NME1-208ENST00000487481 OTOFQ9HC10 1997 aa19.63■□□□□ 0.73
NME1-208ENST00000487481 GJA5P36382 358 aa19.63■□□□□ 0.73
NME1-208ENST00000487481 IREB2P48200 963 aaKnown RBP19.63■□□□□ 0.73
NME1-208ENST00000487481 SLC9C1Q4G0N8 1177 aa19.63■□□□□ 0.73
NME1-208ENST00000487481 NBPF11Q86T75 865 aa19.63■□□□□ 0.73
NME1-208ENST00000487481 MYO1BO43795 1136 aa19.62■□□□□ 0.73
NME1-208ENST00000487481 KLRK1P26718 216 aa19.62■□□□□ 0.73
NME1-208ENST00000487481 IGHMBP2P38935 993 aaKnown RBP19.62■□□□□ 0.73
NME1-208ENST00000487481 CAP1Q01518 475 aa19.62■□□□□ 0.73
NME1-208ENST00000487481 ARHGEF6Q15052 776 aa19.62■□□□□ 0.73
NME1-208ENST00000487481 PTPN18Q99952 460 aa19.62■□□□□ 0.73
NME1-208ENST00000487481 ANKRD2Q9GZV1 360 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms