RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
PRDM2-208ENST00000487453 VPS33BQ9H267 617 aa15.76■□□□□ 0.11
PRDM2-208ENST00000487453 IFIT1P09914 478 aaKnown RBP15.75■□□□□ 0.11
PRDM2-208ENST00000487453 DOK7Q18PE1 504 aa15.75■□□□□ 0.11
PRDM2-208ENST00000487453 DBNDD1Q9H9R9 158 aa15.75■□□□□ 0.11
PRDM2-208ENST00000487453 AKAP2Q9Y2D5 859 aa15.75■□□□□ 0.11
PRDM2-208ENST00000487453 ECE2O60344 883 aa15.74■□□□□ 0.11
PRDM2-208ENST00000487453 ZNF804AQ7Z570 1209 aa15.74■□□□□ 0.11
PRDM2-208ENST00000487453 TXNRD3Q86VQ6 643 aa15.74■□□□□ 0.11
PRDM2-208ENST00000487453 LPIN2Q92539 896 aa15.74■□□□□ 0.11
PRDM2-208ENST00000487453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.74■□□□□ 0.11
PRDM2-208ENST00000487453 MYH13Q9UKX3 1938 aa15.74■□□□□ 0.11
PRDM2-208ENST00000487453 A0A1B0GUL7 405 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 RAB11FIP3O75154 756 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 FGFR2P21802 821 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 GYG1P46976 350 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 HDAC1Q13547 482 aaPredicted RBP15.73■□□□□ 0.11
PRDM2-208ENST00000487453 CAVIN4Q5BKX8 364 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 VPS37DQ86XT2 251 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 KIF1BPQ96EK5 621 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 NEUROD6Q96NK8 337 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 RWDD1Q9H446 243 aaPredicted RBP15.73■□□□□ 0.11
PRDM2-208ENST00000487453 IL1RAPL2Q9NP60 686 aa15.73■□□□□ 0.11
PRDM2-208ENST00000487453 UTRNP46939 3433 aa15.72■□□□□ 0.11
PRDM2-208ENST00000487453 IRS2Q9Y4H2 1338 aa15.72■□□□□ 0.11
PRDM2-208ENST00000487453 TNNI3KQ59H18 835 aa15.72■□□□□ 0.11
PRDM2-208ENST00000487453 C15orf52Q6ZUT6 534 aaKnown RBP15.72■□□□□ 0.11
PRDM2-208ENST00000487453 LRRCC1Q9C099 1032 aa15.72■□□□□ 0.11
PRDM2-208ENST00000487453 FPGT-TNNI3KV9GXZ4 949 aa15.72■□□□□ 0.11
PRDM2-208ENST00000487453 ZC3H4Q9UPT8 1303 aaKnown RBP15.71■□□□□ 0.11
PRDM2-208ENST00000487453 PSME4Q14997 1843 aa15.71■□□□□ 0.11
PRDM2-208ENST00000487453 EIF6P56537 245 aaKnown RBP15.71■□□□□ 0.11
PRDM2-208ENST00000487453 TIMM10P62072 90 aa15.71■□□□□ 0.11
PRDM2-208ENST00000487453 GORABQ5T7V8 394 aa15.71■□□□□ 0.11
PRDM2-208ENST00000487453 FBXW7Q969H0 707 aa15.71■□□□□ 0.11
PRDM2-208ENST00000487453 COA1Q9GZY4 146 aa15.71■□□□□ 0.11
PRDM2-208ENST00000487453 DCTPP1Q9H773 170 aa15.71■□□□□ 0.11
PRDM2-208ENST00000487453 ZNRF3Q9ULT6 936 aa15.71■□□□□ 0.11
PRDM2-208ENST00000487453 ZNF541Q9H0D2 1346 aa15.7■□□□□ 0.1
PRDM2-208ENST00000487453 ADORA1P30542 326 aa15.7■□□□□ 0.1
PRDM2-208ENST00000487453 HIBADHP31937 336 aaKnown RBP15.7■□□□□ 0.1
PRDM2-208ENST00000487453 AACSQ86V21 672 aa15.7■□□□□ 0.1
PRDM2-208ENST00000487453 CLASRPQ8N2M8 674 aaKnown RBP15.7■□□□□ 0.1
PRDM2-208ENST00000487453 GPR108Q9NPR9 543 aa15.7■□□□□ 0.1
PRDM2-208ENST00000487453 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
PRDM2-208ENST00000487453 ZNF646O15015 1829 aaPredicted RBP15.7■□□□□ 0.1
PRDM2-208ENST00000487453 SCN9AQ15858 1988 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 YDJCA8MPS7 323 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 FZD9O00144 591 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 SMARCA5O60264 1052 aaPredicted RBP15.69■□□□□ 0.1
PRDM2-208ENST00000487453 FRAT2O75474 233 aaPredicted RBP15.69■□□□□ 0.1
PRDM2-208ENST00000487453 RAD17O75943 681 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 IGHDP01880 384 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 GCC1Q96CN9 775 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 XAGE2Q96GT9 111 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 FAM84BQ96KN1 310 aaPredicted RBP15.69■□□□□ 0.1
PRDM2-208ENST00000487453 CD209Q9NNX6 404 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
PRDM2-208ENST00000487453 GJA3Q9Y6H8 435 aa15.69■□□□□ 0.1
PRDM2-208ENST00000487453 BCAMP50895 628 aa15.68■□□□□ 0.1
PRDM2-208ENST00000487453 CIAPIN1Q6FI81 312 aa15.68■□□□□ 0.1
PRDM2-208ENST00000487453 PODNQ7Z5L7 613 aa15.68■□□□□ 0.1
PRDM2-208ENST00000487453 EAF2Q96CJ1 260 aaPredicted RBP15.68■□□□□ 0.1
PRDM2-208ENST00000487453 CCDC8Q9H0W5 538 aaPredicted RBP15.68■□□□□ 0.1
PRDM2-208ENST00000487453 TLR7Q9NYK1 1049 aaKnown RBP15.68■□□□□ 0.1
PRDM2-208ENST00000487453 IFIT2P09913 472 aaKnown RBP15.67■□□□□ 0.1
PRDM2-208ENST00000487453 PHKA1P46020 1223 aa15.67■□□□□ 0.1
PRDM2-208ENST00000487453 CCDC102BQ68D86 513 aa15.67■□□□□ 0.1
PRDM2-208ENST00000487453 DPY19L2Q6NUT2 758 aa15.67■□□□□ 0.1
PRDM2-208ENST00000487453 ZNF526Q8TF50 670 aaPredicted RBP15.67■□□□□ 0.1
PRDM2-208ENST00000487453 DBNDD2Q9BQY9 259 aa15.67■□□□□ 0.1
PRDM2-208ENST00000487453 GNL3LQ9NVN8 582 aaKnown RBP15.67■□□□□ 0.1
PRDM2-208ENST00000487453 IL1R1P14778 569 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 YY1P25490 414 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 GTF2IP78347 998 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 CXCL9Q07325 125 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 TNIP1Q15025 636 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 TTC39AQ5SRH9 613 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 ANKRD45Q5TZF3 282 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 B4GALNT3Q6L9W6 998 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 FBXO33Q7Z6M2 555 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 KCNQ5Q9NR82 932 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 DBNLQ9UJU6 430 aaKnown RBP15.66■□□□□ 0.1
PRDM2-208ENST00000487453 JAG2Q9Y219 1238 aa15.66■□□□□ 0.1
PRDM2-208ENST00000487453 COL1A1P02452 1464 aaPredicted RBP15.65■□□□□ 0.1
PRDM2-208ENST00000487453 USP17L3A6NCW0 530 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 USP17L4A6NCW7 530 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 PSMD14O00487 310 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
PRDM2-208ENST00000487453 CHAF1AQ13111 956 aaPredicted RBP15.65■□□□□ 0.1
PRDM2-208ENST00000487453 CCDC158Q5M9N0 1113 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 USP17L1Q7RTZ2 530 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 SMC5Q8IY18 1101 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 GPC2Q8N158 579 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 TDRD7Q8NHU6 1098 aaKnown RBP15.65■□□□□ 0.1
PRDM2-208ENST00000487453 CCDC136Q96JN2 1154 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 KDM2BQ8NHM5 1336 aa15.65■□□□□ 0.1
PRDM2-208ENST00000487453 GLTPD2A6NH11 291 aa15.64■□□□□ 0.09
PRDM2-208ENST00000487453 WDR90Q96KV7 1748 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms