RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 PDE8AO60658 829 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 IARSP41252 1262 aaKnown RBP9.12□□□□□ -0.95
UBE4B-209ENST00000487244 CASP7P55210 303 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 CTSWP56202 376 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 HNRNPUQ00839 825 aaKnown RBP eCLIP9.12□□□□□ -0.95
UBE4B-209ENST00000487244 E2F4Q16254 413 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 BEND3Q5T5X7 828 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 LINS1Q8NG48 757 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 PSMD1Q99460 953 aa9.12□□□□□ -0.95
UBE4B-209ENST00000487244 CEP350Q5VT06 3117 aa9.11□□□□□ -0.95
UBE4B-209ENST00000487244 GLTPD2A6NH11 291 aa9.11□□□□□ -0.95
UBE4B-209ENST00000487244 BBOX1O75936 387 aa9.11□□□□□ -0.95
UBE4B-209ENST00000487244 C1QTNF8P60827 252 aa9.11□□□□□ -0.95
UBE4B-209ENST00000487244 SLC4A10Q6U841 1118 aa9.11□□□□□ -0.95
UBE4B-209ENST00000487244 KDM2BQ8NHM5 1336 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 SCN9AQ15858 1988 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 POTECB2RU33 542 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 EVI5O60447 810 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 DDNO94850 711 aaPredicted RBP9.1□□□□□ -0.95
UBE4B-209ENST00000487244 GPSM2P81274 684 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 AOC3Q16853 763 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 CC2D2BQ6DHV5 1058 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 SP8Q8IXZ3 490 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 ZNF687Q8N1G0 1237 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 TTLL11Q8NHH1 800 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 GPR101Q96P66 508 aaPredicted RBP9.1□□□□□ -0.95
UBE4B-209ENST00000487244 GREM2Q9H772 168 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
UBE4B-209ENST00000487244 PPIP5K2O43314 1243 aa9.09□□□□□ -0.95
UBE4B-209ENST00000487244 RPS8P62241 208 aaKnown RBP9.09□□□□□ -0.95
UBE4B-209ENST00000487244 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
UBE4B-209ENST00000487244 CCDC152Q4G0S7 254 aa9.09□□□□□ -0.95
UBE4B-209ENST00000487244 EPHA10Q5JZY3 1008 aa9.09□□□□□ -0.95
UBE4B-209ENST00000487244 DPP8Q6V1X1 898 aaPredicted RBP9.09□□□□□ -0.95
UBE4B-209ENST00000487244 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
UBE4B-209ENST00000487244 MPNDQ8N594 471 aa9.09□□□□□ -0.95
UBE4B-209ENST00000487244 RTFDC1Q9BY42 306 aaPredicted RBP9.09□□□□□ -0.95
UBE4B-209ENST00000487244 SCN4AP35499 1836 aa9.09□□□□□ -0.95
UBE4B-209ENST00000487244 WTIPA6NIX2 430 aaPredicted RBP9.08□□□□□ -0.96
UBE4B-209ENST00000487244 FZD9O00144 591 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 DPYSL4O14531 572 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 HSP90B1P14625 803 aaKnown RBP9.08□□□□□ -0.96
UBE4B-209ENST00000487244 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
UBE4B-209ENST00000487244 FOXO4P98177 505 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 ALDH1L2Q3SY69 923 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 GRIPAP1Q4V328 841 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 PLA2G12BQ9BX93 195 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 SRCIN1Q9C0H9 1055 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 POLLQ9UGP5 575 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 NSFL1CQ9UNZ2 370 aaKnown RBP9.08□□□□□ -0.96
UBE4B-209ENST00000487244 RTL9Q8NET4 1388 aa9.08□□□□□ -0.96
UBE4B-209ENST00000487244 PTPRCP08575 1304 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 GRM8O00222 908 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 ALDH1L1O75891 902 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 NBPF7P0C2Y1 421 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-209ENST00000487244 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 TMC4Q7Z404 712 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 ANKRD18AQ8IVF6 992 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 NIM1KQ8IY84 436 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 KAZALD1Q96I82 304 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 TMX4Q9H1E5 349 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-209ENST00000487244 NOB1Q9ULX3 412 aaKnown RBP9.07□□□□□ -0.96
UBE4B-209ENST00000487244 ZNF646O15015 1829 aaPredicted RBP9.07□□□□□ -0.96
UBE4B-209ENST00000487244 PSME4Q14997 1843 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 ADAMTSL1Q8N6G6 1762 aa9.07□□□□□ -0.96
UBE4B-209ENST00000487244 ZBED9Q6R2W3 1325 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 YDJCA8MPS7 323 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 CSF1RP07333 972 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 CT47B1P0C2W7 299 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-209ENST00000487244 VEGFAP15692 232 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-209ENST00000487244 ITGA6P23229 1130 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 KIAA2012Q0VF49 1180 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 SUPT20HQ8NEM7 779 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 TBC1D16Q8TBP0 767 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 JDP2Q8WYK2 163 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 SUCLG2Q96I99 432 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 CDC5LQ99459 802 aaKnown RBP9.06□□□□□ -0.96
UBE4B-209ENST00000487244 C9orf78Q9NZ63 289 aaPredicted RBP9.06□□□□□ -0.96
UBE4B-209ENST00000487244 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
UBE4B-209ENST00000487244 BCAR3O75815 825 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 TOMM70O94826 608 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 UFL1O94874 794 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 CXCL9Q07325 125 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 LMBR1LQ6UX01 489 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 C16orf71Q8IYS4 520 aaPredicted RBP9.05□□□□□ -0.96
UBE4B-209ENST00000487244 ZNF594Q96JF6 807 aaPredicted RBP9.05□□□□□ -0.96
UBE4B-209ENST00000487244 DBNDD1Q9H9R9 158 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 PODXL2Q9NZ53 605 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 ANKIB1Q9P2G1 1089 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 MINPP1Q9UNW1 487 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 GJA3Q9Y6H8 435 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 UTYO14607 1347 aa9.05□□□□□ -0.96
UBE4B-209ENST00000487244 RAD17O75943 681 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 KLRK1P26718 216 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 SCNN1DP51172 638 aa9.04□□□□□ -0.96
UBE4B-209ENST00000487244 BRPF1P55201 1214 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-209ENST00000487244 EIF6P56537 245 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms