RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 DCAF8Q5TAQ9 597 aa18.27■□□□□ 0.52
CLDN11-207ENST00000486975 MRPL50Q8N5N7 158 aaKnown RBP18.27■□□□□ 0.52
CLDN11-207ENST00000486975 SRCIN1Q9C0H9 1055 aa18.27■□□□□ 0.52
CLDN11-207ENST00000486975 SCN9AQ15858 1988 aa18.27■□□□□ 0.52
CLDN11-207ENST00000486975 PTPRCP08575 1304 aa18.26■□□□□ 0.51
CLDN11-207ENST00000486975 SHTN1A0MZ66 631 aa18.26■□□□□ 0.51
CLDN11-207ENST00000486975 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
CLDN11-207ENST00000486975 TRMT2AQ8IZ69 625 aaKnown RBP18.26■□□□□ 0.51
CLDN11-207ENST00000486975 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
CLDN11-207ENST00000486975 MPHOSPH8Q99549 860 aa18.26■□□□□ 0.51
CLDN11-207ENST00000486975 PSME4Q14997 1843 aa18.26■□□□□ 0.51
CLDN11-207ENST00000486975 TRAF5O00463 557 aa18.25■□□□□ 0.51
CLDN11-207ENST00000486975 IFIT5Q13325 482 aaKnown RBP18.25■□□□□ 0.51
CLDN11-207ENST00000486975 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
CLDN11-207ENST00000486975 C9orf78Q9NZ63 289 aaPredicted RBP18.25■□□□□ 0.51
CLDN11-207ENST00000486975 SPEF2Q9C093 1822 aa18.25■□□□□ 0.51
CLDN11-207ENST00000486975 UTYO14607 1347 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 WTIPA6NIX2 430 aaPredicted RBP18.24■□□□□ 0.51
CLDN11-207ENST00000486975 HSPA1AP0DMV8 641 aaKnown RBP18.24■□□□□ 0.51
CLDN11-207ENST00000486975 HSPA1BP0DMV9 641 aaKnown RBP18.24■□□□□ 0.51
CLDN11-207ENST00000486975 DEFB115Q30KQ5 88 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 CST9Q5W186 159 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 CDC37L1Q7L3B6 337 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 SSH1Q8WYL5 1049 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 GMLQ99445 158 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
CLDN11-207ENST00000486975 ZNF804BA4D1E1 1349 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 USP17L3A6NCW0 530 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 USP17L4A6NCW7 530 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 CT47B1P0C2W7 299 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-207ENST00000486975 VEGFBP49765 207 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 ZNF280AP59817 542 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-207ENST00000486975 FMR1Q06787 632 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLDN11-207ENST00000486975 ALDH1L2Q3SY69 923 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 EPHA10Q5JZY3 1008 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 LHX8Q68G74 356 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 LMBR1LQ6UX01 489 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 USP17L1Q7RTZ2 530 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 SAMD7Q7Z3H4 446 aa18.23■□□□□ 0.51
CLDN11-207ENST00000486975 GLIS2Q9BZE0 524 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-207ENST00000486975 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
CLDN11-207ENST00000486975 TRPM7Q96QT4 1865 aa18.22■□□□□ 0.51
CLDN11-207ENST00000486975 EGFRP00533 1210 aa18.22■□□□□ 0.51
CLDN11-207ENST00000486975 CHRNDQ07001 517 aa18.22■□□□□ 0.51
CLDN11-207ENST00000486975 TBC1D10BQ4KMP7 808 aaPredicted RBP18.22■□□□□ 0.51
CLDN11-207ENST00000486975 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
CLDN11-207ENST00000486975 TLL2Q9Y6L7 1015 aa18.22■□□□□ 0.51
CLDN11-207ENST00000486975 CCDC57Q2TAC2 916 aa18.21■□□□□ 0.51
CLDN11-207ENST00000486975 KIF4BQ2VIQ3 1234 aa18.21■□□□□ 0.51
CLDN11-207ENST00000486975 C15orf52Q6ZUT6 534 aaKnown RBP18.21■□□□□ 0.51
CLDN11-207ENST00000486975 MYO3BQ8WXR4 1341 aa18.21■□□□□ 0.51
CLDN11-207ENST00000486975 DACT2Q5SW24 774 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 STRIP1Q5VSL9 837 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 TXNRD3Q86VQ6 643 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 KAZALD1Q96I82 304 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 HHIPL1Q96JK4 782 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 TSPYL2Q9H2G4 693 aaPredicted RBP18.2■□□□□ 0.5
CLDN11-207ENST00000486975 CHMP3Q9Y3E7 222 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 IRS2Q9Y4H2 1338 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 THSD7BQ9C0I4 1608 aa18.2■□□□□ 0.5
CLDN11-207ENST00000486975 CELF2O95319 508 aaKnown RBP18.19■□□□□ 0.5
CLDN11-207ENST00000486975 NBPF7P0C2Y1 421 aaPredicted RBP18.19■□□□□ 0.5
CLDN11-207ENST00000486975 USP17L8P0C7I0 530 aa18.19■□□□□ 0.5
CLDN11-207ENST00000486975 MMP14P50281 582 aa18.19■□□□□ 0.5
CLDN11-207ENST00000486975 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
CLDN11-207ENST00000486975 SAPCD2Q86UD0 394 aa18.19■□□□□ 0.5
CLDN11-207ENST00000486975 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
CLDN11-207ENST00000486975 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
CLDN11-207ENST00000486975 KLRK1P26718 216 aa18.18■□□□□ 0.5
CLDN11-207ENST00000486975 ECE1P42892 770 aa18.18■□□□□ 0.5
CLDN11-207ENST00000486975 KCNJ4P48050 445 aa18.18■□□□□ 0.5
CLDN11-207ENST00000486975 RABL6Q3YEC7 729 aaPredicted RBP18.18■□□□□ 0.5
CLDN11-207ENST00000486975 LDHAL6AQ6ZMR3 332 aa18.18■□□□□ 0.5
CLDN11-207ENST00000486975 KRT26Q7Z3Y9 468 aa18.18■□□□□ 0.5
CLDN11-207ENST00000486975 PLCD3Q8N3E9 789 aa18.18■□□□□ 0.5
CLDN11-207ENST00000486975 DCPSQ96C86 337 aaKnown RBP18.18■□□□□ 0.5
CLDN11-207ENST00000486975 ZNF646O15015 1829 aaPredicted RBP18.18■□□□□ 0.5
CLDN11-207ENST00000486975 BRPF1P55201 1214 aaPredicted RBP18.17■□□□□ 0.5
CLDN11-207ENST00000486975 RBM26Q5T8P6 1007 aaKnown RBP18.17■□□□□ 0.5
CLDN11-207ENST00000486975 USP48Q86UV5 1035 aa18.17■□□□□ 0.5
CLDN11-207ENST00000486975 MYOZ2Q9NPC6 264 aa18.17■□□□□ 0.5
CLDN11-207ENST00000486975 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
CLDN11-207ENST00000486975 A0A1B0GUL6 1792 aa18.17■□□□□ 0.5
CLDN11-207ENST00000486975 PCNTO95613 3336 aa18.16■□□□□ 0.5
CLDN11-207ENST00000486975 TAF7LQ5H9L4 462 aa18.16■□□□□ 0.5
CLDN11-207ENST00000486975 ZNF594Q96JF6 807 aaPredicted RBP18.16■□□□□ 0.5
CLDN11-207ENST00000486975 CAPNS2Q96L46 248 aa18.16■□□□□ 0.5
CLDN11-207ENST00000486975 WBP1LQ9NX94 342 aa18.16■□□□□ 0.5
CLDN11-207ENST00000486975 GGA3Q9NZ52 723 aa18.16■□□□□ 0.5
CLDN11-207ENST00000486975 PITPNM2Q9BZ72 1349 aa18.16■□□□□ 0.5
CLDN11-207ENST00000486975 TAF5LO75529 589 aa18.15■□□□□ 0.5
CLDN11-207ENST00000486975 MAP2K1Q02750 393 aaPredicted RBP18.15■□□□□ 0.5
CLDN11-207ENST00000486975 COL13A1Q5TAT6 717 aaPredicted RBP18.15■□□□□ 0.5
CLDN11-207ENST00000486975 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
CLDN11-207ENST00000486975 OGFOD1Q8N543 542 aa18.15■□□□□ 0.5
CLDN11-207ENST00000486975 HELBQ8NG08 1087 aaPredicted RBP18.15■□□□□ 0.5
CLDN11-207ENST00000486975 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
CLDN11-207ENST00000486975 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
CLDN11-207ENST00000486975 CD209Q9NNX6 404 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms