RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.11
FAM228B-204ENST00000486967 VPS8Q8N3P4 1428 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 NUP155O75694 1391 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 ADGRF5Q8IZF2 1346 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 MAN1A2O60476 641 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 FBXO46Q6PJ61 603 aaPredicted RBP8.14□□□□□ -1.11
FAM228B-204ENST00000486967 SAPCD2Q86UD0 394 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 PNMA8AQ86V59 439 aaPredicted RBP8.14□□□□□ -1.11
FAM228B-204ENST00000486967 COL26A1Q96A83 441 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 PRO3102Q9H379 93 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
FAM228B-204ENST00000486967 EYSQ5T1H1 3165 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 PAPPA2Q9BXP8 1791 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 PER1O15534 1290 aaPredicted RBP8.13□□□□□ -1.11
FAM228B-204ENST00000486967 EPHX2P34913 555 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 FMR1Q06787 632 aaKnown RBP eCLIP8.13□□□□□ -1.11
FAM228B-204ENST00000486967 TUSC1Q2TAM9 212 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 MYSM1Q5VVJ2 828 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 DEFB123Q8N688 67 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 DDX54Q8TDD1 881 aaKnown RBP8.13□□□□□ -1.11
FAM228B-204ENST00000486967 ITPKCQ96DU7 683 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 ZIC5Q96T25 663 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 ZFAND3Q9H8U3 227 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 HACL1Q9UJ83 578 aa8.13□□□□□ -1.11
FAM228B-204ENST00000486967 CPSF1Q10570 1443 aaKnown RBP8.12□□□□□ -1.11
FAM228B-204ENST00000486967 TRPA1O75762 1119 aa8.12□□□□□ -1.11
FAM228B-204ENST00000486967 TMF1P82094 1093 aa8.12□□□□□ -1.11
FAM228B-204ENST00000486967 PDE4DQ08499 809 aa8.12□□□□□ -1.11
FAM228B-204ENST00000486967 C6orf118Q5T5N4 469 aa8.12□□□□□ -1.11
FAM228B-204ENST00000486967 LIMD1Q9UGP4 676 aa8.12□□□□□ -1.11
FAM228B-204ENST00000486967 PRUNE2Q8WUY3 3088 aa8.12□□□□□ -1.11
FAM228B-204ENST00000486967 INSRP06213 1382 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 A0A1W2PPC1 479 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 WASLO00401 505 aaPredicted RBP8.11□□□□□ -1.11
FAM228B-204ENST00000486967 NR3C2P08235 984 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 BMP2P12643 396 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 QPCTQ16769 361 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
FAM228B-204ENST00000486967 RNF186Q9NXI6 227 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 POGKQ9P215 609 aa8.11□□□□□ -1.11
FAM228B-204ENST00000486967 PALLDQ8WX93 1383 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 ACEP12821 1306 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 AKAP11Q9UKA4 1901 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 LILRB3O75022 631 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 FSHRP23945 695 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 GRM5P41594 1212 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 RSPH6AQ9H0K4 717 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 HDAC9Q9UKV0 1011 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 SCN11AQ9UI33 1791 aa8.1□□□□□ -1.11
FAM228B-204ENST00000486967 MAGEB6P1A0A0J9YX57 407 aa8.09□□□□□ -1.11
FAM228B-204ENST00000486967 VSIG8P0DPA2 414 aa8.09□□□□□ -1.11
FAM228B-204ENST00000486967 EN2P19622 333 aaPredicted RBP8.09□□□□□ -1.11
FAM228B-204ENST00000486967 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
FAM228B-204ENST00000486967 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
FAM228B-204ENST00000486967 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
FAM228B-204ENST00000486967 P2RX7Q99572 595 aaKnown RBP8.09□□□□□ -1.11
FAM228B-204ENST00000486967 MTMR10Q9NXD2 777 aa8.09□□□□□ -1.11
FAM228B-204ENST00000486967 MAP4K5Q9Y4K4 846 aa8.09□□□□□ -1.11
FAM228B-204ENST00000486967 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
FAM228B-204ENST00000486967 MEIOBQ8N635 442 aa8.08□□□□□ -1.12
FAM228B-204ENST00000486967 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
FAM228B-204ENST00000486967 C1QTNF2Q9BXJ5 285 aa8.08□□□□□ -1.12
FAM228B-204ENST00000486967 IGSF5Q9NSI5 407 aa8.08□□□□□ -1.12
FAM228B-204ENST00000486967 EMILIN1Q9Y6C2 1016 aa8.08□□□□□ -1.12
FAM228B-204ENST00000486967 PIK3C2GO75747 1445 aa8.07□□□□□ -1.12
FAM228B-204ENST00000486967 TRAF5O00463 557 aa8.07□□□□□ -1.12
FAM228B-204ENST00000486967 Q7L0L9 218 aa8.07□□□□□ -1.12
FAM228B-204ENST00000486967 SH3RF1Q7Z6J0 888 aa8.07□□□□□ -1.12
FAM228B-204ENST00000486967 ALYREFQ86V81 257 aaKnown RBP8.07□□□□□ -1.12
FAM228B-204ENST00000486967 TRMT44Q8IYL2 757 aaKnown RBP8.07□□□□□ -1.12
FAM228B-204ENST00000486967 NUDT16Q96DE0 195 aaKnown RBP8.07□□□□□ -1.12
FAM228B-204ENST00000486967 TSEN34Q9BSV6 310 aaKnown RBP8.07□□□□□ -1.12
FAM228B-204ENST00000486967 NLRP2Q9NX02 1062 aa8.07□□□□□ -1.12
FAM228B-204ENST00000486967 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
FAM228B-204ENST00000486967 SH3BP5LQ7L8J4 393 aa8.06□□□□□ -1.12
FAM228B-204ENST00000486967 CCDC116Q8IYX3 515 aa8.06□□□□□ -1.12
FAM228B-204ENST00000486967 TTLL6Q8N841 843 aa8.06□□□□□ -1.12
FAM228B-204ENST00000486967 CARD14Q9BXL6 1004 aa8.06□□□□□ -1.12
FAM228B-204ENST00000486967 FER1L6Q2WGJ9 1857 aa8.06□□□□□ -1.12
FAM228B-204ENST00000486967 BAHCC1Q9P281 2608 aa8.06□□□□□ -1.12
FAM228B-204ENST00000486967 LTBP3Q9NS15 1303 aa8.05□□□□□ -1.12
FAM228B-204ENST00000486967 CELF2O95319 508 aaKnown RBP8.05□□□□□ -1.12
FAM228B-204ENST00000486967 GYS1P13807 737 aa8.05□□□□□ -1.12
FAM228B-204ENST00000486967 RTL5Q5HYW3 569 aaPredicted RBP8.05□□□□□ -1.12
FAM228B-204ENST00000486967 LINC00116Q8NCU8 138 aa8.05□□□□□ -1.12
FAM228B-204ENST00000486967 DLEC1Q9Y238 1755 aa8.05□□□□□ -1.12
FAM228B-204ENST00000486967 PPFIA3O75145 1194 aa8.04□□□□□ -1.12
FAM228B-204ENST00000486967 SYNE4Q8N205 404 aa8.04□□□□□ -1.12
FAM228B-204ENST00000486967 ZNF296Q8WUU4 475 aaPredicted RBP8.04□□□□□ -1.12
FAM228B-204ENST00000486967 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
FAM228B-204ENST00000486967 RNF123Q5XPI4 1314 aa8.03□□□□□ -1.12
FAM228B-204ENST00000486967 FAM155AB1AL88 458 aaPredicted RBP8.03□□□□□ -1.12
FAM228B-204ENST00000486967 KIF23Q02241 960 aaPredicted RBP8.03□□□□□ -1.12
FAM228B-204ENST00000486967 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.03□□□□□ -1.12
FAM228B-204ENST00000486967 TRAPPC3LQ5T215 181 aa8.03□□□□□ -1.12
FAM228B-204ENST00000486967 SLC24A3Q9HC58 644 aa8.03□□□□□ -1.12
FAM228B-204ENST00000486967 POLR3EQ9NVU0 708 aa8.03□□□□□ -1.12
FAM228B-204ENST00000486967 HCN4Q9Y3Q4 1203 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms