RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.27■□□□□ 0.99
PDLIM7-207ENST00000486828 BCL9O00512 1426 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 M0R2C6 588 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 ADORA1P30542 326 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 EXOSC10Q01780 885 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 SCRN1Q12765 414 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 GORABQ5T7V8 394 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 FAM173BQ6P4H8 233 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 LRRC2Q9BYS8 371 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 ABCC12Q96J65 1359 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 SPATA31A1Q5TZJ5 1347 aa21.26■□□□□ 0.99
PDLIM7-207ENST00000486828 E7EWF7 191 aa21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 FKBP4Q02790 459 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 HSP90AB3PQ58FF7 597 aa21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 SMARCC2Q8TAQ2 1214 aa21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 SPATA31A5Q5VU36 1347 aa21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 SPATA31A7Q8IWB4 1347 aa21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 ZFYP08048 801 aaPredicted RBP21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 MCM5P33992 734 aa21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 CCDC85AQ96PX6 553 aaPredicted RBP21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 ZKSCAN5Q9Y2L8 839 aa21.25■□□□□ 0.99
PDLIM7-207ENST00000486828 HCLS1P14317 486 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-207ENST00000486828 VPS72Q15906 364 aa21.24■□□□□ 0.99
PDLIM7-207ENST00000486828 HLFQ16534 295 aa21.24■□□□□ 0.99
PDLIM7-207ENST00000486828 GIMAP6Q6P9H5 292 aa21.24■□□□□ 0.99
PDLIM7-207ENST00000486828 NLRP10Q86W26 655 aa21.24■□□□□ 0.99
PDLIM7-207ENST00000486828 OSBP2Q969R2 916 aa21.24■□□□□ 0.99
PDLIM7-207ENST00000486828 RIC1Q4ADV7 1423 aa21.24■□□□□ 0.99
PDLIM7-207ENST00000486828 ZNF500O60304 480 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-207ENST00000486828 CYP19A1P11511 503 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-207ENST00000486828 RESTQ13127 1097 aa21.23■□□□□ 0.99
PDLIM7-207ENST00000486828 ANKRD36CQ5JPF3 1778 aa21.23■□□□□ 0.99
PDLIM7-207ENST00000486828 A0A0G2JLW4 131 aa21.23■□□□□ 0.99
PDLIM7-207ENST00000486828 SPATA32Q96LK8 384 aa21.23■□□□□ 0.99
PDLIM7-207ENST00000486828 APOBRQ0VD83 1088 aa21.22■□□□□ 0.99
PDLIM7-207ENST00000486828 NSUN7Q8NE18 718 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-207ENST00000486828 LEO1Q8WVC0 666 aaPredicted RBP21.22■□□□□ 0.99
PDLIM7-207ENST00000486828 SLC4A9Q96Q91 983 aa21.22■□□□□ 0.99
PDLIM7-207ENST00000486828 RIPOR2Q9Y4F9 1068 aa21.22■□□□□ 0.99
PDLIM7-207ENST00000486828 H3BQV1 296 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 GPTP24298 496 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 SCARF1Q14162 830 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 IFFO2Q5TF58 517 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 SYNE4Q8N205 404 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 TTLL11Q8NHH1 800 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 ZSCAN16Q9H4T2 348 aaPredicted RBP21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 THRAP3Q9Y2W1 955 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 ITGA6P23229 1130 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 CTSWP56202 376 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 HMGN5P82970 282 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 ATP2B3Q16720 1220 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 DDX11Q96FC9 970 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 TFIP11Q9UBB9 837 aaKnown RBP21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 CTNNA3Q9UI47 895 aa21.21■□□□□ 0.99
PDLIM7-207ENST00000486828 LIG1P18858 919 aa21.2■□□□□ 0.98
PDLIM7-207ENST00000486828 ZAP70P43403 619 aa21.2■□□□□ 0.98
PDLIM7-207ENST00000486828 METTL24Q5JXM2 366 aa21.2■□□□□ 0.98
PDLIM7-207ENST00000486828 FBXL16Q8N461 479 aa21.2■□□□□ 0.98
PDLIM7-207ENST00000486828 GREM2Q9H772 168 aa21.2■□□□□ 0.98
PDLIM7-207ENST00000486828 QTRT2Q9H974 415 aaKnown RBP21.2■□□□□ 0.98
PDLIM7-207ENST00000486828 ANKRD18BA2A2Z9 1011 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 GOLGA6L4A6NEF3 574 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 CTDNEP1O95476 244 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 WASHC4Q2M389 1173 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 ZNF772Q68DY9 489 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 TTLL5Q6EMB2 1281 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 LDHAL6AQ6ZMR3 332 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 APPBP2Q92624 585 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 ZNF274Q96GC6 653 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 NUP62CLQ9H1M0 184 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 USP25Q9UHP3 1055 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 ZBTB1Q9Y2K1 713 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 KIF3AQ9Y496 699 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 FOXP2O15409 715 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 OFD1O75665 1012 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 NAA16Q6N069 864 aaPredicted RBP21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 POTEAQ6S8J7 498 aa21.19■□□□□ 0.98
PDLIM7-207ENST00000486828 MYH3P11055 1940 aa21.18■□□□□ 0.98
PDLIM7-207ENST00000486828 PTPDC1A2A3K4 754 aa21.18■□□□□ 0.98
PDLIM7-207ENST00000486828 PTMAP06454 111 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-207ENST00000486828 CCDC192P0DO97 292 aa21.18■□□□□ 0.98
PDLIM7-207ENST00000486828 CHMP4CQ96CF2 233 aa21.18■□□□□ 0.98
PDLIM7-207ENST00000486828 ERVV-1B6SEH8 477 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 EXOC5O00471 708 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 IRS4O14654 1257 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 MAP3K11Q16584 847 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 IMMTQ16891 758 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 ZNF512BQ96KM6 892 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 TRPC5Q9UL62 973 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 SALL1Q9NSC2 1324 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 KDM4AO75164 1064 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 ATRNO75882 1429 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 PDIA3P30101 505 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 BARGINQ6ZT62 677 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 DDX19AQ9NUU7 478 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 TRMT112Q9UI30 125 aaKnown RBP21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 MYH7P12883 1935 aa21.17■□□□□ 0.98
PDLIM7-207ENST00000486828 WNK3Q9BYP7 1800 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms