RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 DPP8Q6V1X1 898 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-227ENST00000486806 MPNDQ8N594 471 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 XAGE2Q96GT9 111 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 PSMD1Q99460 953 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 CCDC8Q9H0W5 538 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-227ENST00000486806 TMX4Q9H1E5 349 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-227ENST00000486806 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-227ENST00000486806 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-227ENST00000486806 STAP2Q9UGK3 403 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 WWC3Q9ULE0 1092 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 BCS1LQ9Y276 419 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 ZBTB22O15209 634 aa11.75□□□□□ -0.53
MCF2L-227ENST00000486806 KCNJ4P48050 445 aa11.75□□□□□ -0.53
MCF2L-227ENST00000486806 PLEKHM2Q8IWE5 1019 aa11.75□□□□□ -0.53
MCF2L-227ENST00000486806 RTKN2Q8IZC4 609 aa11.75□□□□□ -0.53
MCF2L-227ENST00000486806 GPR101Q96P66 508 aaPredicted RBP11.75□□□□□ -0.53
MCF2L-227ENST00000486806 OSBPL3Q9H4L5 887 aa11.75□□□□□ -0.53
MCF2L-227ENST00000486806 AOX1Q06278 1338 aa11.75□□□□□ -0.53
MCF2L-227ENST00000486806 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
MCF2L-227ENST00000486806 NFKBIEO00221 500 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 PDE1AP54750 535 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
MCF2L-227ENST00000486806 CCDC102BQ68D86 513 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 TXNRD3Q86VQ6 643 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 PI4K2BQ8TCG2 481 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 ZNF512BQ96KM6 892 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-227ENST00000486806 FAM84BQ96KN1 310 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-227ENST00000486806 NEUROD6Q96NK8 337 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 ECHDC1Q9NTX5 307 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 LTBP3Q9NS15 1303 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 COL1A1P02452 1464 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-227ENST00000486806 UTRNP46939 3433 aa11.74□□□□□ -0.53
MCF2L-227ENST00000486806 YBX3P16989 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
MCF2L-227ENST00000486806 ARID4AP29374 1257 aaPredicted RBP11.73□□□□□ -0.53
MCF2L-227ENST00000486806 PHKA1P46020 1223 aa11.73□□□□□ -0.53
MCF2L-227ENST00000486806 FER1L6Q2WGJ9 1857 aa11.73□□□□□ -0.53
MCF2L-227ENST00000486806 TSHZ3Q63HK5 1081 aa11.73□□□□□ -0.53
MCF2L-227ENST00000486806 FBXO33Q7Z6M2 555 aa11.73□□□□□ -0.53
MCF2L-227ENST00000486806 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
MCF2L-227ENST00000486806 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
MCF2L-227ENST00000486806 COL4A5P29400 1685 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 C6orf229H3BNL8 230 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 ATP5JP18859 108 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 GYG1P46976 350 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 BCAMP50895 628 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 KIAA2012Q0VF49 1180 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 SUPT20HQ8NEM7 779 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.72□□□□□ -0.53
MCF2L-227ENST00000486806 EYA3Q99504 573 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 TAOK3Q9H2K8 898 aa11.72□□□□□ -0.53
MCF2L-227ENST00000486806 PDS5AQ29RF7 1337 aaKnown RBP11.71□□□□□ -0.53
MCF2L-227ENST00000486806 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.53
MCF2L-227ENST00000486806 HIBADHP31937 336 aaKnown RBP11.71□□□□□ -0.53
MCF2L-227ENST00000486806 RGS3P49796 1198 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 RASGRF1Q13972 1273 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 SCARF1Q14162 830 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 WASHC4Q2M389 1173 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 CAVIN4Q5BKX8 364 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 CCDC158Q5M9N0 1113 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 ZNF804AQ7Z570 1209 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
MCF2L-227ENST00000486806 ERC2O15083 957 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 UQCRFS1P1P0C7P4 283 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 IL1R1P14778 569 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 GSPT1P15170 499 aaKnown RBP11.7□□□□□ -0.54
MCF2L-227ENST00000486806 MCAMP43121 646 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 PRELPP51888 382 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 RASSF7Q02833 373 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 AOC3Q16853 763 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 TTC39AQ5SRH9 613 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 GORABQ5T7V8 394 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 TTC22Q5TAA0 569 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 ZC3H12CQ9C0D7 883 aaKnown RBP11.7□□□□□ -0.54
MCF2L-227ENST00000486806 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
MCF2L-227ENST00000486806 ZNF277Q9NRM2 450 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-227ENST00000486806 SEMA3EO15041 775 aa11.69□□□□□ -0.54
MCF2L-227ENST00000486806 PPIP5K2O43314 1243 aa11.69□□□□□ -0.54
MCF2L-227ENST00000486806 IARSP41252 1262 aaKnown RBP11.69□□□□□ -0.54
MCF2L-227ENST00000486806 PI16Q6UXB8 463 aa11.69□□□□□ -0.54
MCF2L-227ENST00000486806 VPS37DQ86XT2 251 aa11.69□□□□□ -0.54
MCF2L-227ENST00000486806 TDRD7Q8NHU6 1098 aaKnown RBP11.69□□□□□ -0.54
MCF2L-227ENST00000486806 HAUS7Q99871 368 aa11.69□□□□□ -0.54
MCF2L-227ENST00000486806 CD209Q9NNX6 404 aa11.69□□□□□ -0.54
MCF2L-227ENST00000486806 HMG20BQ9P0W2 317 aa11.69□□□□□ -0.54
MCF2L-227ENST00000486806 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
MCF2L-227ENST00000486806 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
MCF2L-227ENST00000486806 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
MCF2L-227ENST00000486806 BOLA2Q9H3K6 86 aa11.68□□□□□ -0.54
MCF2L-227ENST00000486806 GNL3LQ9NVN8 582 aaKnown RBP11.68□□□□□ -0.54
MCF2L-227ENST00000486806 ECE2O60344 883 aa11.67□□□□□ -0.54
MCF2L-227ENST00000486806 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
MCF2L-227ENST00000486806 PODNQ7Z5L7 613 aa11.67□□□□□ -0.54
MCF2L-227ENST00000486806 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
MCF2L-227ENST00000486806 DBNDD1Q9H9R9 158 aa11.67□□□□□ -0.54
MCF2L-227ENST00000486806 DENND2AQ9ULE3 1009 aa11.67□□□□□ -0.54
MCF2L-227ENST00000486806 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-227ENST00000486806 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
MCF2L-227ENST00000486806 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-227ENST00000486806 FAM205AQ6ZU69 1335 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms