RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CHRNDQ07001 517 aa15.79■□□□□ 0.12
HDAC6-229ENST00000486665 HSP90AB4PQ58FF6 505 aa15.79■□□□□ 0.12
HDAC6-229ENST00000486665 METTL24Q5JXM2 366 aa15.79■□□□□ 0.12
HDAC6-229ENST00000486665 ANKRD45Q5TZF3 282 aa15.79■□□□□ 0.12
HDAC6-229ENST00000486665 CENPQQ7L2Z9 268 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-229ENST00000486665 SP8Q8IXZ3 490 aa15.79■□□□□ 0.12
HDAC6-229ENST00000486665 RHPN1Q8TCX5 695 aa15.79■□□□□ 0.12
HDAC6-229ENST00000486665 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
HDAC6-229ENST00000486665 SNAP23O00161 211 aa15.78■□□□□ 0.12
HDAC6-229ENST00000486665 GPSM2P81274 684 aa15.78■□□□□ 0.12
HDAC6-229ENST00000486665 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
HDAC6-229ENST00000486665 ERC1Q8IUD2 1116 aa15.78■□□□□ 0.12
HDAC6-229ENST00000486665 VGLL2Q8N8G2 317 aa15.78■□□□□ 0.12
HDAC6-229ENST00000486665 IL1RAPL2Q9NP60 686 aa15.78■□□□□ 0.12
HDAC6-229ENST00000486665 CEP126Q9P2H0 1117 aa15.78■□□□□ 0.12
HDAC6-229ENST00000486665 CNTNAP1P78357 1384 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 MROH5Q6ZUA9 1318 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 FZD9O00144 591 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 IARSP41252 1262 aaKnown RBP15.77■□□□□ 0.12
HDAC6-229ENST00000486665 NUCB1Q02818 461 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 EAPPQ56P03 285 aaPredicted RBP15.77■□□□□ 0.12
HDAC6-229ENST00000486665 TMC4Q7Z404 712 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 KIF1BPQ96EK5 621 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 LRRCC1Q9C099 1032 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
HDAC6-229ENST00000486665 IQCA1LA6NCM1 817 aa15.76■□□□□ 0.11
HDAC6-229ENST00000486665 PDE8BO95263 885 aa15.76■□□□□ 0.11
HDAC6-229ENST00000486665 ANKRD2Q9GZV1 360 aa15.76■□□□□ 0.11
HDAC6-229ENST00000486665 SPEF2Q9C093 1822 aa15.75■□□□□ 0.11
HDAC6-229ENST00000486665 FOXN1O15353 648 aa15.75■□□□□ 0.11
HDAC6-229ENST00000486665 EPHX2P34913 555 aa15.75■□□□□ 0.11
HDAC6-229ENST00000486665 TIMM10P62072 90 aa15.75■□□□□ 0.11
HDAC6-229ENST00000486665 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
HDAC6-229ENST00000486665 EAF2Q96CJ1 260 aaPredicted RBP15.75■□□□□ 0.11
HDAC6-229ENST00000486665 LNPKQ9C0E8 428 aa15.75■□□□□ 0.11
HDAC6-229ENST00000486665 HACL1Q9UJ83 578 aa15.75■□□□□ 0.11
HDAC6-229ENST00000486665 NSFL1CQ9UNZ2 370 aaKnown RBP15.75■□□□□ 0.11
HDAC6-229ENST00000486665 FGFR2P21802 821 aa15.74■□□□□ 0.11
HDAC6-229ENST00000486665 VEGFBP49765 207 aa15.74■□□□□ 0.11
HDAC6-229ENST00000486665 TNNI3KQ59H18 835 aa15.74■□□□□ 0.11
HDAC6-229ENST00000486665 MAP1SQ66K74 1059 aaPredicted RBP15.74■□□□□ 0.11
HDAC6-229ENST00000486665 CHD1LQ86WJ1 897 aa15.74■□□□□ 0.11
HDAC6-229ENST00000486665 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
HDAC6-229ENST00000486665 ANKIB1Q9P2G1 1089 aa15.74■□□□□ 0.11
HDAC6-229ENST00000486665 FPGT-TNNI3KV9GXZ4 949 aa15.74■□□□□ 0.11
HDAC6-229ENST00000486665 FMR1Q06787 632 aaKnown RBP eCLIP15.73■□□□□ 0.112e-6■■■■□ 22.5
HDAC6-229ENST00000486665 MPNDQ8N594 471 aa15.73■□□□□ 0.11
HDAC6-229ENST00000486665 GPR101Q96P66 508 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-229ENST00000486665 PSMD1Q99460 953 aa15.73■□□□□ 0.11
HDAC6-229ENST00000486665 CCDC8Q9H0W5 538 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-229ENST00000486665 GPR108Q9NPR9 543 aa15.73■□□□□ 0.11
HDAC6-229ENST00000486665 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
HDAC6-229ENST00000486665 POLLQ9UGP5 575 aa15.73■□□□□ 0.11
HDAC6-229ENST00000486665 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
HDAC6-229ENST00000486665 XDHP47989 1333 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 TMEM88BA6NKF7 163 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 PDE4AP27815 886 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 ADORA1P30542 326 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 PUM3Q15397 648 aaKnown RBP15.72■□□□□ 0.11
HDAC6-229ENST00000486665 ATP2B3Q16720 1220 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 CC2D2BQ6DHV5 1058 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 CLASRPQ8N2M8 674 aaKnown RBP15.72■□□□□ 0.11
HDAC6-229ENST00000486665 TBC1D16Q8TBP0 767 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-229ENST00000486665 NEUROD6Q96NK8 337 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-229ENST00000486665 AKAP2Q9Y2D5 859 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 LEMD3Q9Y2U8 911 aa15.72■□□□□ 0.11
HDAC6-229ENST00000486665 ZNF804BA4D1E1 1349 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 A0A1B0GUL7 405 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 ATP2B4P23634 1241 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 KLRK1P26718 216 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 UBE4AQ14139 1066 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 DPP8Q6V1X1 898 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-229ENST00000486665 AACSQ86V21 672 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 GPC2Q8N158 579 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 LPIN2Q92539 896 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 TLR7Q9NYK1 1049 aaKnown RBP15.71■□□□□ 0.11
HDAC6-229ENST00000486665 GGA1Q9UJY5 639 aa15.71■□□□□ 0.11
HDAC6-229ENST00000486665 IRS2Q9Y4H2 1338 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 C6orf229H3BNL8 230 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 UFL1O94874 794 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 KCNJ4P48050 445 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 TXNRD3Q86VQ6 643 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 CNTROBQ8N137 903 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 XAGE2Q96GT9 111 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 DBNDD2Q9BQY9 259 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-229ENST00000486665 DBNLQ9UJU6 430 aaKnown RBP15.7■□□□□ 0.1
HDAC6-229ENST00000486665 GJA3Q9Y6H8 435 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 LRRC37AA6NMS7 1700 aa15.7■□□□□ 0.1
HDAC6-229ENST00000486665 ZNF609O15014 1411 aa15.69■□□□□ 0.1
HDAC6-229ENST00000486665 IFIT2P09913 472 aaKnown RBP15.69■□□□□ 0.1
HDAC6-229ENST00000486665 SLC5A1P13866 664 aa15.69■□□□□ 0.1
HDAC6-229ENST00000486665 EPS15P42566 896 aa15.69■□□□□ 0.1
HDAC6-229ENST00000486665 SCNN1DP51172 638 aa15.69■□□□□ 0.1
HDAC6-229ENST00000486665 RTFDC1Q9BY42 306 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-229ENST00000486665 IFIT1P09914 478 aaKnown RBP15.68■□□□□ 0.1
HDAC6-229ENST00000486665 PNMA8AQ86V59 439 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-229ENST00000486665 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 1187.6 ms