RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 POTECB2RU33 542 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 NFKBIEO00221 500 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 WNT7AO00755 349 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 CYP19A1P11511 503 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-209ENST00000486618 ERFEQ4G0M1 354 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 RIC3Q7Z5B4 369 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 PRDM10Q9NQV6 1147 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
HDAC3-209ENST00000486618 MTMR7Q9Y216 660 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 SCN11AQ9UI33 1791 aa9.06□□□□□ -0.96
HDAC3-209ENST00000486618 TIAM2Q8IVF5 1701 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 NRXN2Q9P2S2 1712 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 ADAMTS7Q9UKP4 1686 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 COL15A1P39059 1388 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 A0A087WZG4 1122 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 CCNYL3P0C7X3 344 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 PDE6BP35913 854 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 PTPRNQ16849 979 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 AKAP4Q5JQC9 854 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 MYSM1Q5VVJ2 828 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 SULT6B1Q6IMI4 303 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 PTCRAQ6ISU1 281 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-209ENST00000486618 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 CYP4X1Q8N118 509 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDAC3-209ENST00000486618 AIDAQ96BJ3 306 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 SLC52A2Q9HAB3 445 aa9.05□□□□□ -0.96
HDAC3-209ENST00000486618 PCNTO95613 3336 aa9.04□□□□□ -0.96
HDAC3-209ENST00000486618 CTCFP49711 727 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-209ENST00000486618 SKOR1P84550 965 aa9.04□□□□□ -0.96
HDAC3-209ENST00000486618 DESI1Q6ICB0 168 aa9.04□□□□□ -0.96
HDAC3-209ENST00000486618 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
HDAC3-209ENST00000486618 LTBP3Q9NS15 1303 aa9.04□□□□□ -0.96
HDAC3-209ENST00000486618 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 CFAP99D6REC4 459 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 E9PSI1 815 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 FOXN1O15353 648 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 C21orf2O43822 256 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 STARD3NLO95772 234 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 CANXP27824 592 aaKnown RBP9.03□□□□□ -0.96
HDAC3-209ENST00000486618 WNT7BP56706 349 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 SOGA3Q5TF21 947 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 BICDL1Q6ZP65 573 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 MORC1Q86VD1 984 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 BRIP1Q9BX63 1249 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 TAOK3Q9H2K8 898 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 ZBTB1Q9Y2K1 713 aa9.03□□□□□ -0.96
HDAC3-209ENST00000486618 FER1L6Q2WGJ9 1857 aa9.02□□□□□ -0.96
HDAC3-209ENST00000486618 CNTNAP1P78357 1384 aa9.02□□□□□ -0.97
HDAC3-209ENST00000486618 NPHP1O15259 732 aa9.02□□□□□ -0.97
HDAC3-209ENST00000486618 RNMTO43148 476 aaKnown RBP9.02□□□□□ -0.97
HDAC3-209ENST00000486618 DDNO94850 711 aaPredicted RBP9.02□□□□□ -0.97
HDAC3-209ENST00000486618 SLC39A6Q13433 755 aa9.02□□□□□ -0.97
HDAC3-209ENST00000486618 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
HDAC3-209ENST00000486618 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
HDAC3-209ENST00000486618 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
HDAC3-209ENST00000486618 CNKSR1Q969H4 720 aa9.02□□□□□ -0.97
HDAC3-209ENST00000486618 LGR6Q9HBX8 967 aa9.02□□□□□ -0.97
HDAC3-209ENST00000486618 TTC24A2A3L6 582 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-209ENST00000486618 TMEM88BA6NKF7 163 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 APBB1O00213 710 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 EIF5P55010 431 aaKnown RBP9.01□□□□□ -0.97
HDAC3-209ENST00000486618 TTC5Q8N0Z6 440 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 SNIP1Q8TAD8 396 aaKnown RBP9.01□□□□□ -0.97
HDAC3-209ENST00000486618 TEX13AQ9BXU3 409 aaPredicted RBP9.01□□□□□ -0.97
HDAC3-209ENST00000486618 UNC93B1Q9H1C4 597 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 PANK3Q9H999 370 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 EVA1BQ9NVM1 165 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 PASKQ96RG2 1323 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 SCN4AP35499 1836 aa9.01□□□□□ -0.97
HDAC3-209ENST00000486618 CARMIL3Q8ND23 1372 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 ST8SIA5O15466 376 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 IL13P35225 146 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 VEGFBP49765 207 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 QPCTQ16769 361 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 TMCO4Q5TGY1 634 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 TBC1D9BQ66K14 1250 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 STYK1Q6J9G0 422 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 PRR5LQ6MZQ0 368 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 FAM177A1Q8N128 213 aaPredicted RBP9□□□□□ -0.97
HDAC3-209ENST00000486618 ZNF592Q92610 1267 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 SETDB2Q96T68 719 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 VIRMAQ69YN4 1812 aaKnown RBP9□□□□□ -0.97
HDAC3-209ENST00000486618 ANKRD31Q8N7Z5 1873 aa9□□□□□ -0.97
HDAC3-209ENST00000486618 AVPP01185 164 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 LBX1P52954 281 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 ST5P78524 1137 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 KCNH2Q12809 1159 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 CNBD1Q8NA66 436 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 MASTLQ96GX5 879 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 TAF1DQ9H5J8 278 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-209ENST00000486618 AAASQ9NRG9 546 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 ZNF330Q9Y3S2 320 aaPredicted RBP8.99□□□□□ -0.97
HDAC3-209ENST00000486618 MRC1P22897 1456 aa8.99□□□□□ -0.97
HDAC3-209ENST00000486618 SRGNP10124 158 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 SMPD1P17405 629 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms