RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 GPSM2P81274 684 aa8.9□□□□□ -0.98
VPS50-218ENST00000485994 CIAPIN1Q6FI81 312 aa8.9□□□□□ -0.98
VPS50-218ENST00000485994 UBE3BQ7Z3V4 1068 aa8.9□□□□□ -0.98
VPS50-218ENST00000485994 SLC51AQ86UW1 340 aa8.9□□□□□ -0.98
VPS50-218ENST00000485994 MRPL50Q8N5N7 158 aaKnown RBP8.9□□□□□ -0.98
VPS50-218ENST00000485994 ZC3H12CQ9C0D7 883 aaKnown RBP8.9□□□□□ -0.98
VPS50-218ENST00000485994 PGAP2Q9UHJ9 254 aa8.9□□□□□ -0.98
VPS50-218ENST00000485994 MINPP1Q9UNW1 487 aa8.9□□□□□ -0.98
VPS50-218ENST00000485994 UTYO14607 1347 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 XDHP47989 1333 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 PASKQ96RG2 1323 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 RPS12P25398 132 aaKnown RBP8.89□□□□□ -0.99
VPS50-218ENST00000485994 LMOD1P29536 600 aaPredicted RBP8.89□□□□□ -0.99
VPS50-218ENST00000485994 EPS15P42566 896 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 JMYQ8N9B5 988 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 ZC3H15Q8WU90 426 aaKnown RBP8.89□□□□□ -0.99
VPS50-218ENST00000485994 JARID2Q92833 1246 aaPredicted RBP8.89□□□□□ -0.99
VPS50-218ENST00000485994 ADARB2Q9NS39 739 aaKnown RBP8.89□□□□□ -0.99
VPS50-218ENST00000485994 GPRC5DQ9NZD1 345 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 GGA1Q9UJY5 639 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 LEMD3Q9Y2U8 911 aa8.89□□□□□ -0.99
VPS50-218ENST00000485994 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 DUOX1Q9NRD9 1551 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 YDJCA8MPS7 323 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 F6X3S4 739 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 GRM8O00222 908 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 VIL1P09327 827 aaKnown RBP8.88□□□□□ -0.99
VPS50-218ENST00000485994 ITGA6P23229 1130 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
VPS50-218ENST00000485994 PSEN1P49768 467 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 MMP14P50281 582 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 FOXO4P98177 505 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 DIEXFQ68CQ4 756 aaKnown RBP8.88□□□□□ -0.99
VPS50-218ENST00000485994 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 SSH1Q8WYL5 1049 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 KLRG1Q96E93 195 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 SRCIN1Q9C0H9 1055 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 ANKRD2Q9GZV1 360 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 GREM2Q9H772 168 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 ANKIB1Q9P2G1 1089 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 GJA3Q9Y6H8 435 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 ADAMTSL1Q8N6G6 1762 aa8.88□□□□□ -0.99
VPS50-218ENST00000485994 POLR2AP24928 1970 aaKnown RBP8.87□□□□□ -0.99
VPS50-218ENST00000485994 C15orf52Q6ZUT6 534 aaKnown RBP8.87□□□□□ -0.99
VPS50-218ENST00000485994 CNTROBQ8N137 903 aa8.87□□□□□ -0.99
VPS50-218ENST00000485994 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
VPS50-218ENST00000485994 COL4A1P02462 1669 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 ANKRD18BA2A2Z9 1011 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 H7C1D1 291 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 PSMD14O00487 310 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 ECE2O60344 883 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 RAD17O75943 681 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 UFL1O94874 794 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 CCT4P50991 539 aaKnown RBP8.86□□□□□ -0.99
VPS50-218ENST00000485994 IFIT5Q13325 482 aaKnown RBP8.86□□□□□ -0.99
VPS50-218ENST00000485994 EAPPQ56P03 285 aaPredicted RBP8.86□□□□□ -0.99
VPS50-218ENST00000485994 AGBL3Q8NEM8 1001 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 ARHGAP45Q92619 1136 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 MPHOSPH8Q99549 860 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 C9orf78Q9NZ63 289 aaPredicted RBP8.86□□□□□ -0.99
VPS50-218ENST00000485994 CNOT7Q9UIV1 285 aaKnown RBP8.86□□□□□ -0.99
VPS50-218ENST00000485994 ZNF609O15014 1411 aa8.86□□□□□ -0.99
VPS50-218ENST00000485994 SCN9AQ15858 1988 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 TMEM88BA6NKF7 163 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 RIMBP2O15034 1052 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 GMPSP49915 693 aaPredicted RBP8.85□□□□□ -0.99
VPS50-218ENST00000485994 RABL6Q3YEC7 729 aaPredicted RBP8.85□□□□□ -0.99
VPS50-218ENST00000485994 LMBR1LQ6UX01 489 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 KAZALD1Q96I82 304 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 CCDC85AQ96PX6 553 aaPredicted RBP8.85□□□□□ -0.99
VPS50-218ENST00000485994 GMLQ99445 158 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 BCL2L13Q9BXK5 485 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 COA1Q9GZY4 146 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 USP44Q9H0E7 712 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 DBNDD1Q9H9R9 158 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 MED23Q9ULK4 1368 aa8.85□□□□□ -0.99
VPS50-218ENST00000485994 PSME4Q14997 1843 aa8.84□□□□□ -0.99
VPS50-218ENST00000485994 G3V3G9 751 aa8.84□□□□□ -0.99
VPS50-218ENST00000485994 HIRAP54198 1017 aaPredicted RBP8.84□□□□□ -0.99
VPS50-218ENST00000485994 DOK7Q18PE1 504 aa8.84□□□□□ -0.99
VPS50-218ENST00000485994 CCDC57Q2TAC2 916 aa8.84□□□□□ -0.99
VPS50-218ENST00000485994 EPHA10Q5JZY3 1008 aa8.84□□□□□ -0.99
VPS50-218ENST00000485994 SLC4A10Q6U841 1118 aa8.84□□□□□ -0.99
VPS50-218ENST00000485994 ZNF467Q7Z7K2 595 aaPredicted RBP8.84□□□□□ -0.99
VPS50-218ENST00000485994 KCNQ5Q9NR82 932 aa8.84□□□□□ -0.99
VPS50-218ENST00000485994 PCNTO95613 3336 aa8.83□□□□□ -1
VPS50-218ENST00000485994 ZNF804BA4D1E1 1349 aa8.83□□□□□ -1
VPS50-218ENST00000485994 IRS2Q9Y4H2 1338 aa8.83□□□□□ -1
VPS50-218ENST00000485994 TRPM7Q96QT4 1865 aa8.83□□□□□ -1
VPS50-218ENST00000485994 USP17L3A6NCW0 530 aa8.83□□□□□ -1
VPS50-218ENST00000485994 USP17L4A6NCW7 530 aa8.83□□□□□ -1
VPS50-218ENST00000485994 NBPF7P0C2Y1 421 aaPredicted RBP8.83□□□□□ -1
VPS50-218ENST00000485994 RARSP54136 660 aaKnown RBP8.83□□□□□ -1
VPS50-218ENST00000485994 ZNF280AP59817 542 aaPredicted RBP8.83□□□□□ -1
VPS50-218ENST00000485994 HTRA3P83110 453 aa8.83□□□□□ -1
VPS50-218ENST00000485994 CHRNDQ07001 517 aa8.83□□□□□ -1
VPS50-218ENST00000485994 FAM161AQ3B820 660 aa8.83□□□□□ -1
VPS50-218ENST00000485994 STRIP1Q5VSL9 837 aa8.83□□□□□ -1
VPS50-218ENST00000485994 MAP1SQ66K74 1059 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms